Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG3G9190 Aethionema arabicum HOM05D006803 ORTHO05D008552 1.2e-94 349.7 171 100.0
AL8G27460 Arabidopsis lyrata HOM05D006803 ORTHO05D008552 5.7e-76 287.7 171 82.5
AT5G52960 Arabidopsis thaliana HOM05D006803 ORTHO05D008552 3.7e-75 285.0 171 81.3
Thhalv10014833m.g Eutrema salsugineum HOM05D006803 ORTHO05D008552 3.2e-74 282.0 172 83.1
Carub.0008s1314 Capsella rubella HOM05D006803 ORTHO05D008552 1.5e-71 273.1 172 79.7
Sp6g15120 Schrenkiella parvula HOM05D006803 ORTHO05D008552 1.9e-71 272.7 172 82.0
C09p42680 Brassica napus HOM05D006803 ORTHO05D008552 1.2e-65 253.4 171 76.6
BolC9t57144H Brassica oleracea HOM05D006803 ORTHO05D008552 1.2e-65 253.4 171 76.6
A10p10450 Brassica napus HOM05D006803 ORTHO05D008552 1.6e-65 253.1 173 75.7
BraA10t43128Z Brassica rapa HOM05D006803 ORTHO05D008552 6.0e-65 251.1 174 75.3
THA.LOC104825126 Tarenaya hassleriana HOM05D006803 ORTHO05D008552 3.1e-61 238.8 171 73.1
Thecc.03G190700 Theobroma cacao HOM05D006803 ORTHO05D008552 7.3e-55 217.6 153 71.2
Cpa.g.sc3.33 Carica papaya HOM05D006803 ORTHO05D008552 4.0e-53 211.8 171 62.0
Gohir.D08G108400 Gossypium hirsutum HOM05D006803 ORTHO05D008552 6.8e-53 211.1 152 67.8
Gorai.004G116000 Gossypium raimondii HOM05D006803 ORTHO05D008552 6.8e-53 211.1 152 67.8
COL.COLO4_07418 Corchorus olitorius HOM05D006803 ORTHO05D008552 8.9e-53 210.7 153 67.3
ClCG05G008590 Citrullus lanatus HOM05D006803 ORTHO05D008552 3.4e-52 208.8 122 77.9
MELO3C006968.2 Cucumis melo HOM05D006803 ORTHO05D008552 3.4e-52 208.8 118 79.7
Duzib084G0216 Durio zibethinus HOM05D006803 ORTHO05D008552 3.4e-52 208.8 153 68.0
CARHR265930 Cardamine hirsuta HOM05D006803 ORTHO05D008552 2.2e-51 206.1 141 73.8
Sed0009140 Sechium edule HOM05D006803 ORTHO05D008552 2.2e-51 206.1 119 80.7
Manes.14G019756 Manihot esculenta HOM05D006803 ORTHO05D008552 3.7e-51 205.3 154 68.2
Potri.012G033700 Populus trichocarpa HOM05D006803 ORTHO05D008552 4.9e-51 204.9 162 62.3
Nn1g01776 Nelumbo nucifera HOM05D006803 ORTHO05D008552 8.3e-51 204.1 172 63.4
CiPaw.05G259100 Carya illinoinensis HOM05D006803 ORTHO05D008552 2.4e-50 202.6 176 61.9
Gohir.A08G097600 Gossypium hirsutum HOM05D006803 ORTHO05D008552 4.1e-50 201.8 154 68.8
MD01G1213500 Malus domestica HOM05D006803 ORTHO05D008552 5.4e-50 201.4 175 60.6
Hma1.2p1_0327F.1_g126650 Hydrangea macrophylla HOM05D006803 ORTHO05D008552 9.2e-50 200.7 175 61.7
Duzib205G0804 Durio zibethinus HOM05D006803 ORTHO05D008552 1.6e-49 199.9 153 64.1
vmacro06587 Vaccinium macrocarpon HOM05D006803 ORTHO05D008552 1.6e-49 199.9 180 58.9
arahy.Tifrunner.gnm1.ann1.GHK1U8 Arachis hypogaea HOM05D006803 ORTHO05D008552 2.1e-49 199.5 126 76.2
arahy.Tifrunner.gnm1.ann1.V6YLC6 Arachis hypogaea HOM05D006803 ORTHO05D008552 2.1e-49 199.5 126 76.2
Actinidia34181 Actinidia chinensis HOM05D006803 ORTHO05D008552 2.7e-49 199.1 171 59.1
GSVIVG01028745001 Vitis vinifera HOM05D006803 ORTHO05D008552 2.7e-49 199.1 156 64.1
FAN06G1048 Fragaria x ananassa HOM05D006803 ORTHO05D008552 6.0e-49 198.0 119 77.3
FAN06G4527 Fragaria x ananassa HOM05D006803 ORTHO05D008552 6.0e-49 198.0 119 77.3
Oeu044167.1 Olea europaea HOM05D006803 ORTHO05D008552 7.8e-49 197.6 171 60.2
FvH4_7g30800 Fragaria vesca HOM05D006803 ORTHO05D008552 1.0e-48 197.2 119 77.3
FAN01G0710 Fragaria x ananassa HOM05D006803 ORTHO05D008552 1.3e-48 196.8 115 79.1
FAN10G2870 Fragaria x ananassa HOM05D006803 ORTHO05D008552 1.3e-48 196.8 119 76.5
FAN03G2299 Fragaria x ananassa HOM05D006803 ORTHO05D008552 1.7e-48 196.4 119 75.6
QL09p011586 Quercus lobata HOM05D006803 ORTHO05D008552 1.7e-48 196.4 119 77.3
Prupe.2G305500 Prunus persica HOM05D006803 ORTHO05D008552 2.3e-48 196.1 161 63.4
RcHm_v2.0_Chr1g0379821 Rosa chinensis HOM05D006803 ORTHO05D008552 3.0e-48 195.7 113 79.6
Atru.chr1.293 Acer truncatum HOM05D006803 ORTHO05D008552 3.9e-48 195.3 183 57.9
SGA_v2.0_scaffold44G16771 Striga asiatica HOM05D006803 ORTHO05D008552 3.9e-48 195.3 175 62.3
TAR333G0006 Trochodendron aralioides HOM05D006803 ORTHO05D008552 6.6e-48 194.5 160 63.8
Hund11694 Selenicereus undatus HOM05D006803 ORTHO05D008552 1.9e-47 193.0 167 60.5
TWI14G0759 Tripterygium wilfordii HOM05D006803 ORTHO05D008552 1.9e-47 193.0 163 62.0
Aqoxy7G00212 Aquilegia oxysepala HOM05D006803 ORTHO05D008552 2.5e-47 192.6 171 61.4
Glyma.09G125800 Glycine max HOM05D006803 ORTHO05D008552 2.5e-47 192.6 164 61.0
Dinv28351 Davidia involucrata HOM05D006803 ORTHO05D008552 3.3e-47 192.2 167 59.9
MD07G1283300 Malus domestica HOM05D006803 ORTHO05D008552 3.3e-47 192.2 122 71.3
SalBow4G1856 Salvia bowleyana HOM05D006803 ORTHO05D008552 3.3e-47 192.2 171 58.5
SalBow4G1881 Salvia bowleyana HOM05D006803 ORTHO05D008552 3.3e-47 192.2 171 58.5
TPR.G36689 Trifolium pratense HOM05D006803 ORTHO05D008552 3.3e-47 192.2 128 69.5
Ciclev10006070m.g Citrus clementina HOM05D006803 ORTHO05D008552 4.3e-47 191.8 176 60.2
Migut.F00254 Erythranthe guttata HOM05D006803 ORTHO05D008552 7.3e-47 191.0 171 56.1
Potri.016G123100 Populus trichocarpa HOM05D006803 ORTHO05D008552 7.3e-47 191.0 152 61.8
MBI06_g04289_MAGBIO Magnolia biondii HOM05D006803 ORTHO05D008552 1.2e-46 190.3 118 77.1
HanXRQChr09g0253111 Helianthus annuus HOM05D006803 ORTHO05D008552 2.1e-46 189.5 153 59.5
Sed0024434 Sechium edule HOM05D006803 ORTHO05D008552 3.6e-46 188.7 118 75.4
unitig_37.g11977 Utricularia gibba HOM05D000211 ORTHO05D002285 4.7e-46 188.3 112 75.9
Actinidia08612 Actinidia chinensis HOM05D006803 ORTHO05D008552 8.1e-46 187.6 174 58.0
Ca_19336_v3 Cicer arietinum L. HOM05D006803 ORTHO05D008552 8.1e-46 187.6 172 56.4
Lalb_Chr01g0009661 Lupinus albus HOM05D006803 ORTHO05D008552 8.1e-46 187.6 188 54.3
Psat1g097000 Pisum sativum HOM05D006803 ORTHO05D008552 8.1e-46 187.6 127 69.3
Eucgr.K00316 Eucalyptus grandis HOM05D006803 ORTHO05D008552 1.1e-45 187.2 113 77.0
DCAR_014527 Daucus carota HOM05D006803 ORTHO05D008552 1.8e-45 186.4 161 55.9
PGR142G1334 Punica granatum HOM05D006803 ORTHO05D008552 2.4e-45 186.0 115 73.9
PSO384G2893 Papaver somniferum HOM05D006803 ORTHO05D008552 3.1e-45 185.7 112 76.8
Phvul.004G101300 Phaseolus vulgaris HOM05D006803 ORTHO05D008552 3.1e-45 185.7 173 60.7
PSO135G0887 Papaver somniferum HOM05D006803 ORTHO05D008552 4.0e-45 185.3 169 59.2
TWI39G0241 Tripterygium wilfordii HOM05D006803 ORTHO05D008552 4.0e-45 185.3 147 63.9
VMungo0464G0281 Vigna mungo HOM05D006803 ORTHO05D008552 4.0e-45 185.3 172 60.5
Lj3C914T13 Lonicera japonica HOM05D006803 ORTHO05D008552 5.2e-45 184.9 123 73.2
Lj2g0024519 Lotus japonicus HOM05D006803 ORTHO05D008552 8.9e-45 184.1 160 60.0
Sabra15G0018100 Salix brachista HOM05D006803 ORTHO05D008552 1.2e-44 183.7 188 52.1
Sc19g0001080 Simmondsia chinensis HOM05D006803 ORTHO05D008552 1.2e-44 183.7 96 83.3
CANSAT21G0672 Cannabis sativa HOM05D006803 ORTHO05D008552 1.5e-44 183.3 171 55.0
Lsat_1_v5_gn_9_57340 Lactuca sativa HOM05D006803 ORTHO05D008552 1.5e-44 183.3 154 59.7
Glyma.16G172700 Glycine max HOM05D006803 ORTHO05D008552 2.6e-44 182.6 116 69.0
Peaxi162Scf00904g00457 Petunia axillaris HOM05D006803 ORTHO05D008552 2.6e-44 182.6 171 56.1
Sabra15G0020600 Salix brachista HOM05D006803 ORTHO05D008552 2.6e-44 182.6 188 51.1
CAN.G108.11 Capsicum annuum HOM05D006803 ORTHO05D008552 3.4e-44 182.2 110 73.6
CDE04G2534 Ceratophyllum demersum HOM05D006803 ORTHO05D008552 3.4e-44 182.2 103 79.6
CDE03G0029 Ceratophyllum demersum HOM05D006803 ORTHO05D008552 4.4e-44 181.8 108 77.8
Solyc03g007540.3 Solanum lycopersicum HOM05D006803 ORTHO05D008552 4.4e-44 181.8 118 69.5
Sopen03g003500 Solanum pennellii HOM05D006803 ORTHO05D008552 4.4e-44 181.8 118 69.5
ATR0721G182 Amborella trichopoda HOM05D006803 ORTHO05D008552 9.9e-44 180.6 97 82.5
EL10Ac3g05364 Beta vulgaris HOM05D006803 ORTHO05D008552 9.9e-44 180.6 169 55.0
BcaB08g35659 Brassica carinata HOM05D006803 ORTHO05D008552 9.9e-44 180.6 139 71.2
Cc02_g02040 Coffea canephora HOM05D006803 ORTHO05D008552 1.7e-43 179.9 97 79.4
CSS0034587 Camellia sinensis var. sinensis HOM05D006803 ORTHO05D008552 2.2e-43 179.5 96 79.2
Medtr6g034205 Medicago truncatula HOM05D006803 ORTHO05D008552 2.2e-43 179.5 126 66.7
Mapoly0006s0111 Marchantia polymorpha HOM05D006803 ORTHO05D008552 2.9e-43 179.1 97 79.4
PGSC0003DMG400009065 Solanum tuberosum HOM05D006803 ORTHO05D008552 3.8e-43 178.7 110 70.9
Rhsim03G0197200 Rhododendron simsii HOM05D006803 ORTHO05D008552 1.4e-42 176.8 99 78.8
Sabra12G0022800 Salix brachista HOM05D006803 ORTHO05D008552 6.0e-41 171.4 232 42.7
Zm00001eb296320 Zea mays HOM05D006803 ORTHO05D008552 2.3e-40 169.5 98 76.5
ECA232G4170 Erigeron canadensis HOM05D006803 ORTHO05D008552 8.7e-40 167.5 99 75.8
Os05g0569200 Oryza sativa ssp. japonica HOM05D006803 ORTHO05D008552 1.1e-39 167.2 98 73.5
AagrBONN_evm.TU.Sc2ySwM_228.1351 Anthoceros agrestis HOM05D006803 ORTHO05D008552 3.3e-39 165.6 92 80.4
SEGI_13941 Sequoiadendron giganteum HOM05D006803 ORTHO05D008552 2.1e-38 162.9 97 74.2
Pp3c4_26620 Physcomitrium patens HOM05D006803 ORTHO05D008552 1.1e-37 160.6 91 78.0
SMO169G0228 Selaginella moellendorffii HOM05D006803 ORTHO05D008552 6.9e-37 157.9 115 63.5
Pp3c26_8430 Physcomitrium patens HOM05D006803 ORTHO05D008552 3.2e-34 149.1 88 73.9
Haze_00093 Corylus avellana HOM05D006803 ORTHO05D008552 3.5e-33 145.6 145 58.6
CBR_g9073 Chara braunii HOM05D006803 ORTHO05D008552 1.1e-31 140.6 99 65.7
Nitab4.5_0000472g0050 Nicotiana tabacum HOM05D006803 ORTHO05D008552 4.3e-31 138.7 110 62.7
Nitab4.5_0001331g0090 Nicotiana tabacum HOM05D006803 ORTHO05D008552 4.3e-31 138.7 110 62.7
Eucgr.L03342 Eucalyptus grandis HOM05D006803 ORTHO05D008552 2.4e-26 122.9 78 71.8
Oeu059677.1 Olea europaea HOM05D006803 ORTHO05D008552 6.0e-25 118.2 90 57.8
HPP92_011456 Vanilla planifolia HOM05D006803 ORTHO05D008552 1.0e-24 117.5 65 80.0
Oeu008094.1 Olea europaea HOM05D006803 ORTHO05D008552 5.3e-21 105.1 126 46.8
Oeu059693.1 Olea europaea HOM05D006803 ORTHO05D008552 1.9e-18 96.7 126 44.4
Thecc.03G190900 Theobroma cacao HOM05D006803 ORTHO05D008552 8.4e-11 71.2 36 91.7
RcHm_v2.0_Chr1g0379761 Rosa chinensis HOM05D006803 ORTHO05D008552 7.1e-10 68.2 35 85.7


User provided reference genes

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