Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG3G9040 Aethionema arabicum HOM05D002465 ORTHO05D005308 0.0e+00 1373.6 663 100.0
Carub.0008s1296 Capsella rubella HOM05D002465 ORTHO05D005308 3.7e-280 968.0 662 73.7
Thhalv10012991m.g Eutrema salsugineum HOM05D002465 ORTHO05D005308 4.1e-279 964.5 661 72.9
AL8G27230 Arabidopsis lyrata HOM05D002465 ORTHO05D005308 1.8e-274 949.1 655 72.8
BcaB05g21981 Brassica carinata HOM05D002465 ORTHO05D005308 5.9e-270 934.1 661 71.3
AT5G52800 Arabidopsis thaliana HOM05D002465 ORTHO05D005308 2.6e-265 918.7 663 70.9
BcaC03g14499 Brassica carinata HOM05D002465 ORTHO05D005308 5.7e-265 917.5 663 70.1
BraA02t06223Z Brassica rapa HOM05D002465 ORTHO05D005308 7.5e-265 917.1 663 70.4
C02p19370 Brassica napus HOM05D002465 ORTHO05D005308 3.7e-264 914.8 663 70.1
A02p11610 Brassica napus HOM05D002465 ORTHO05D005308 4.9e-264 914.4 660 70.5
BolC2t08072H Brassica oleracea HOM05D002465 ORTHO05D005308 3.0e-258 895.2 642 71.2
Sp6g14950 Schrenkiella parvula HOM05D002465 ORTHO05D005308 7.0e-255 884.0 669 69.1
THA.LOC104811947 Tarenaya hassleriana HOM05D002465 ORTHO05D005308 2.1e-243 845.9 663 65.3
Gorai.008G274000 Gossypium raimondii HOM05D002465 ORTHO05D005308 6.7e-197 691.4 670 54.3
Thecc.03G185500 Theobroma cacao HOM05D002465 ORTHO05D005308 6.7e-197 691.4 674 53.6
Cpa.g.sc107.121 Carica papaya HOM05D002465 ORTHO05D005308 1.1e-194 684.1 675 54.5
Gohir.D12G255900 Gossypium hirsutum HOM05D002465 ORTHO05D005308 1.3e-192 677.2 661 53.9
QL09p012529 Quercus lobata HOM05D002465 ORTHO05D005308 4.2e-191 672.2 665 53.7
EL10Ac3g05400 Beta vulgaris HOM05D002465 ORTHO05D005308 2.3e-189 666.4 658 54.1
Sabra17G0123700 Salix brachista HOM05D002465 ORTHO05D005308 1.5e-188 663.7 691 53.0
Potri.017G148000 Populus trichocarpa HOM05D002465 ORTHO05D005308 5.7e-188 661.8 673 52.9
Sabra17G0123300 Salix brachista HOM05D002465 ORTHO05D005308 1.6e-187 660.2 692 52.5
TWI23G1289 Tripterygium wilfordii HOM05D002465 ORTHO05D005308 2.2e-187 659.8 669 51.7
Manes.06G153300 Manihot esculenta HOM05D002465 ORTHO05D005308 1.1e-186 657.5 670 52.4
Sc13g0009230 Simmondsia chinensis HOM05D002465 ORTHO05D005308 1.8e-186 656.8 653 51.3
Prupe.2G301900 Prunus persica HOM05D002465 ORTHO05D005308 6.9e-186 654.8 658 54.0
Haze_00055 Corylus avellana HOM05D002465 ORTHO05D005308 2.6e-185 652.9 677 51.3
Migut.F00281 Erythranthe guttata HOM05D002465 ORTHO05D005308 2.9e-184 649.4 654 52.3
Actinidia34161 Actinidia chinensis HOM05D002465 ORTHO05D005308 1.9e-183 646.7 667 51.6
Medtr6g052330 Medicago truncatula HOM05D002465 ORTHO05D005308 2.5e-183 646.4 671 51.9
Ciclev10006841m.g Citrus clementina HOM05D002465 ORTHO05D005308 4.2e-183 645.6 650 53.1
CAN.G290.13 Capsicum annuum HOM05D002465 ORTHO05D005308 9.4e-183 644.4 657 51.1
Dinv35264 Davidia involucrata HOM05D002465 ORTHO05D005308 1.4e-181 640.6 666 50.8
COL.COLO4_30301 Corchorus olitorius HOM05D002465 ORTHO05D005308 1.8e-181 640.2 649 52.9
Lalb_Chr19g0130571 Lupinus albus HOM05D002465 ORTHO05D005308 2.3e-181 639.8 673 49.9
Lj2g0016146 Lotus japonicus HOM05D002465 ORTHO05D005308 6.7e-181 638.3 668 51.8
MD01G1209800 Malus domestica HOM05D002465 ORTHO05D005308 2.0e-180 636.7 662 52.4
PGR042G3288 Punica granatum HOM05D002465 ORTHO05D005308 5.7e-180 635.2 663 51.0
Duzib205G0901 Durio zibethinus HOM05D002465 ORTHO05D005308 1.3e-179 634.0 657 52.4
Eucgr.A02722 Eucalyptus grandis HOM05D002465 ORTHO05D005308 2.8e-179 632.9 656 50.3
Glyma.09G129600 Glycine max HOM05D002465 ORTHO05D005308 3.7e-179 632.5 674 50.1
Hund04793 Selenicereus undatus HOM05D002465 ORTHO05D005308 3.7e-179 632.5 645 51.9
Sopen12g022610 Solanum pennellii HOM05D002465 ORTHO05D005308 4.8e-179 632.1 654 51.2
TPR.G9187 Trifolium pratense HOM05D002465 ORTHO05D005308 6.3e-179 631.7 665 51.3
RcHm_v2.0_Chr1g0378531 Rosa chinensis HOM05D002465 ORTHO05D005308 1.8e-178 630.2 657 51.9
Nitab4.5_0007593g0010 Nicotiana tabacum HOM05D002465 ORTHO05D005308 1.2e-177 627.5 655 51.3
Aqoxy5G04085 Aquilegia oxysepala HOM05D002465 ORTHO05D005308 2.0e-177 626.7 674 50.9
GSVIVG01028829001 Vitis vinifera HOM05D002465 ORTHO05D005308 2.6e-177 626.3 671 51.1
AUR62021107 Chenopodium quinoa HOM05D002465 ORTHO05D005308 4.5e-177 625.5 629 53.7
Cfa016295 Carpinus fangiana HOM05D002465 ORTHO05D005308 5.9e-177 625.2 568 55.5
SGA_v2.0_scaffold60G21117 Striga asiatica HOM05D002465 ORTHO05D005308 1.0e-176 624.4 703 49.4
FAN06G3650 Fragaria x ananassa HOM05D002465 ORTHO05D005308 1.7e-176 623.6 645 52.1
FAN06G0430 Fragaria x ananassa HOM05D002465 ORTHO05D005308 5.0e-176 622.1 645 51.9
FvH4_7g30390 Fragaria vesca HOM05D002465 ORTHO05D005308 6.5e-176 621.7 634 52.7
AUR62031432 Chenopodium quinoa HOM05D002465 ORTHO05D005308 2.1e-174 616.7 629 52.9
FAN10G1194 Fragaria x ananassa HOM05D002465 ORTHO05D005308 2.7e-174 616.3 645 51.9
FAN03G3136 Fragaria x ananassa HOM05D002465 ORTHO05D005308 1.0e-173 614.4 647 52.2
Gohir.A12G253600 Gossypium hirsutum HOM05D002465 ORTHO05D005308 1.1e-172 610.9 676 49.0
HanXRQChr15g0494161 Helianthus annuus HOM05D002465 ORTHO05D005308 1.1e-172 610.9 656 51.1
CsaV3_3G017530 Cucumis sativus L. HOM05D002465 ORTHO05D005308 2.6e-172 609.8 673 50.4
DCAR_008895 Daucus carota HOM05D002465 ORTHO05D005308 3.3e-172 609.4 672 47.8
ECA232G4104 Erigeron canadensis HOM05D002465 ORTHO05D005308 5.7e-172 608.6 659 49.9
CiPaw.05G261600 Carya illinoinensis HOM05D002465 ORTHO05D005308 7.4e-172 608.2 554 56.9
Lsat_1_v5_gn_9_56800 Lactuca sativa HOM05D002465 ORTHO05D005308 1.7e-171 607.1 662 49.8
SalBow4G2218 Salvia bowleyana HOM05D002465 ORTHO05D005308 1.7e-171 607.1 646 49.7
PSO170G2577 Papaver somniferum HOM05D002465 ORTHO05D005308 6.3e-171 605.1 668 48.1
Psat0s1684g0080 Pisum sativum HOM05D002465 ORTHO05D005308 1.1e-170 604.4 652 50.2
Nitab4.5_0008234g0010 Nicotiana tabacum HOM05D002465 ORTHO05D005308 2.4e-170 603.2 663 48.4
Sed0022656 Sechium edule HOM05D002465 ORTHO05D005308 2.4e-170 603.2 660 50.5
Cc02_g02290 Coffea canephora HOM05D002465 ORTHO05D005308 5.3e-170 602.1 673 47.4
ClCG05G008450 Citrullus lanatus HOM05D002465 ORTHO05D005308 7.7e-169 598.2 670 49.4
TAR374G1583 Trochodendron aralioides HOM05D002465 ORTHO05D005308 1.0e-168 597.8 566 55.1
Oeu036031.1 Olea europaea HOM05D002465 ORTHO05D005308 8.5e-168 594.7 659 49.9
FAN10G1435 Fragaria x ananassa HOM05D002465 ORTHO05D005308 1.5e-167 594.0 634 51.6
Nn1g01670 Nelumbo nucifera HOM05D002465 ORTHO05D005308 1.4e-165 587.4 539 55.1
Ah.07g206490 Amaranthus hybridus HOM05D002465 ORTHO05D005308 1.2e-164 584.3 632 50.3
unitig_52.g17726 Utricularia gibba HOM05D002465 ORTHO05D005308 1.8e-162 577.0 641 47.9
Os07g0467900 Oryza sativa ssp. japonica HOM05D002465 ORTHO05D005308 5.9e-161 572.0 663 47.1
vmacro06621 Vaccinium macrocarpon HOM05D002465 ORTHO05D005308 5.0e-160 568.9 497 57.3
Lj1C1006G4 Lonicera japonica HOM05D002465 ORTHO05D005308 1.1e-159 567.8 600 50.3
Rhsim03G0191700 Rhododendron simsii HOM05D002465 ORTHO05D005308 3.4e-156 556.2 559 50.8
FAN01G1269 Fragaria x ananassa HOM05D002465 ORTHO05D005308 2.8e-155 553.1 645 47.4
MBI04_g26956_MAGBIO Magnolia biondii HOM05D002465 ORTHO05D005308 3.7e-155 552.7 552 51.8
Phvul.004G106200 Phaseolus vulgaris HOM05D002465 ORTHO05D005308 5.0e-152 542.3 569 49.9
Atru.BG.183.p Acer truncatum HOM05D002465 ORTHO05D005308 6.1e-150 535.4 482 58.1
MELO3C006956.2 Cucumis melo HOM05D002465 ORTHO05D005308 8.6e-144 515.0 665 45.6
DCAR_018565 Daucus carota HOM05D002465 ORTHO05D005308 1.1e-143 514.6 510 49.8
arahy.Tifrunner.gnm1.ann1.TJ5MNL Arachis hypogaea HOM05D002465 ORTHO05D005308 7.3e-143 511.9 468 56.4
ATR0661G279 Amborella trichopoda HOM05D002465 ORTHO05D005308 1.6e-142 510.8 541 49.5
DCAR_029292 Daucus carota HOM05D002465 ORTHO05D005308 1.6e-142 510.8 501 50.1
arahy.Tifrunner.gnm1.ann1.77GMEU Arachis hypogaea HOM05D002465 ORTHO05D005308 4.7e-142 509.2 646 44.9
Hma1.2p1_0274F.1_g110040 Hydrangea macrophylla HOM05D002465 ORTHO05D005308 2.3e-141 506.9 582 47.9
SHI09096 Sapria himalayana HOM05D002465 ORTHO05D005308 2.6e-140 503.4 507 51.9
Medtr6g052340 Medicago truncatula HOM05D002465 ORTHO05D005308 7.8e-137 491.9 438 56.6
HPP92_015081 Vanilla planifolia HOM05D002465 ORTHO05D005308 1.2e-134 484.6 533 48.0
Peaxi162Scf00023g00823 Petunia axillaris HOM05D002465 ORTHO05D005308 5.8e-132 475.7 470 51.3
Mapoly0051s0060 Marchantia polymorpha HOM05D002465 ORTHO05D005308 8.9e-117 425.2 595 40.7
CSS0029570 Camellia sinensis var. sinensis HOM05D002465 ORTHO05D005308 1.4e-114 417.9 369 58.3
Ca_26606_v3 Cicer arietinum L. HOM05D002465 ORTHO05D005308 1.7e-112 411.0 650 39.7
Pp3c1_12340 Physcomitrium patens HOM05D002465 ORTHO05D005308 2.5e-111 407.1 587 40.9
AagrBONN_evm.TU.Sc2ySwM_228.3313 Anthoceros agrestis HOM05D002465 ORTHO05D005308 5.8e-108 396.0 485 43.7
MSTRG.8702 Avicennia marina HOM05D002465 ORTHO05D005308 7.8e-105 385.6 359 55.2
RcHm_v2.0_Chr3g0497461 Rosa chinensis HOM05D002465 ORTHO05D005308 3.3e-103 380.2 373 54.2
Sabra17G0121400 Salix brachista HOM05D002465 ORTHO05D005308 4.5e-100 369.8 518 42.3
SMO103G0001 Selaginella moellendorffii HOM05D002465 ORTHO05D005308 2.1e-94 350.9 399 45.6
CBR_g36403 Chara braunii HOM05D002465 ORTHO05D005308 2.2e-91 340.9 497 41.0
VMungo0464G1215 Vigna mungo HOM05D002465 ORTHO05D005308 1.2e-84 318.5 314 53.2
CANSAT21G2443 Cannabis sativa HOM05D002465 ORTHO05D005308 6.7e-80 302.8 362 47.8
DCAR_005086 Daucus carota HOM05D002465 ORTHO05D005308 5.3e-69 266.5 333 41.7
SEGI_25618 Sequoiadendron giganteum HOM05D002465 ORTHO05D005308 6.7e-64 249.6 217 55.8
DCAR_030059 Daucus carota HOM05D002465 ORTHO05D005308 1.2e-57 228.8 174 58.6
MSTRG.8701 Avicennia marina HOM05D002465 ORTHO05D005308 1.4e-56 225.3 282 44.3
FAN05G2518 Fragaria x ananassa HOM05D002465 ORTHO05D005308 1.1e-55 222.2 168 64.9
FAN25G3664 Fragaria x ananassa HOM05D002465 ORTHO05D005308 1.1e-55 222.2 168 64.9
DCAR_029376 Daucus carota HOM05D002465 ORTHO05D005308 3.3e-55 220.7 151 61.6
MCO12G313 Micromonas commoda HOM05D002465 ORTHO05D005308 5.7e-55 219.9 428 33.2
FAN09G4610 Fragaria x ananassa HOM05D002465 ORTHO05D005308 1.3e-54 218.8 149 69.1
FAN10G2552 Fragaria x ananassa HOM05D002465 ORTHO05D005308 1.3e-54 218.8 149 69.1
CSS0047166 Camellia sinensis var. sinensis HOM05D002465 ORTHO05D005308 8.8e-48 196.1 245 46.5
Oeu058603.1 Olea europaea HOM05D002465 ORTHO05D005308 1.5e-47 195.3 212 50.0
Zm00001eb320240 Zea mays HOM05D002465 ORTHO05D005308 2.4e-45 188.0 313 38.0
MD01G1209700 Malus domestica HOM05D002465 ORTHO05D005308 4.0e-40 170.6 262 40.8
Actinidia08585 Actinidia chinensis HOM05D002465 ORTHO05D005308 8.0e-33 146.4 98 65.3
HPP92_028543 Vanilla planifolia HOM05D002465 ORTHO05D005308 1.8e-32 145.2 195 39.5
PRCOL_00005773 Prasinoderma coloniale HOM05D002465 ORTHO05D005308 1.5e-31 142.1 557 27.1
Actinidia08586 Actinidia chinensis HOM05D002465 ORTHO05D008860 1.3e-30 139.0 262 35.1
Psat0s1616g0040 Pisum sativum HOM05D002465 ORTHO05D005308 1.6e-28 132.1 113 58.4
DCAR_030105 Daucus carota HOM05D002465 ORTHO05D005308 1.0e-27 129.4 258 31.4
FAN03G1432 Fragaria x ananassa HOM05D002465 ORTHO05D005308 2.8e-25 121.3 168 43.5
FAN09G0727 Fragaria x ananassa HOM05D002465 ORTHO05D005308 2.8e-25 121.3 168 43.5
FAN16G1547 Fragaria x ananassa HOM05D002465 ORTHO05D005308 2.8e-25 121.3 168 43.5
FAN22G1212 Fragaria x ananassa HOM05D002465 ORTHO05D005308 2.8e-25 121.3 168 43.5
FAN25G1827 Fragaria x ananassa HOM05D002465 ORTHO05D005308 2.8e-25 121.3 168 43.5
FAN25G2717 Fragaria x ananassa HOM05D002465 ORTHO05D005308 2.8e-25 121.3 168 43.5
FAN28G0992 Fragaria x ananassa HOM05D002465 ORTHO05D005308 2.8e-25 121.3 168 43.5
Cre17.g705150 Chlamydomonas reinhardtii HOM05D002465 ORTHO05D005308 3.6e-25 120.9 407 26.8
RcHm_v2.0_Chr1g0361031 Rosa chinensis HOM05D002465 ORTHO05D005308 6.1e-25 120.2 73 72.6
FAN09G3189 Fragaria x ananassa HOM05D002465 ORTHO05D005308 4.0e-24 117.5 149 45.0
FAN14G0324 Fragaria x ananassa HOM05D002465 ORTHO05D005308 4.0e-24 117.5 149 45.0
FAN21G0521 Fragaria x ananassa HOM05D002465 ORTHO05D005308 4.0e-24 117.5 149 45.0
FAN27G0148 Fragaria x ananassa HOM05D002465 ORTHO05D005308 4.0e-24 117.5 149 45.0
FAN27G0541 Fragaria x ananassa HOM05D002465 ORTHO05D005308 4.0e-24 117.5 149 45.0
FAN27G0848 Fragaria x ananassa HOM05D002465 ORTHO05D005308 4.0e-24 117.5 149 45.0
CBR_g81559 Chara braunii HOM05D002465 ORTHO05D005308 9.8e-23 112.8 170 37.6
SEGI_28877 Sequoiadendron giganteum HOM05D002465 ORTHO05D005308 5.4e-21 107.1 201 32.8
vmacro06620 Vaccinium macrocarpon HOM05D002465 ORTHO05D005308 6.0e-20 103.6 131 42.0
Sabra17G0121500 Salix brachista HOM05D002465 ORTHO05D005308 3.0e-19 101.3 161 42.2
CBR_g19350 Chara braunii HOM05D000019 ORTHO05D000048 5.2e-16 90.5 160 31.9
Sabra18G0007300 Salix brachista HOM05D002718 ORTHO05D003269 6.8e-16 90.1 108 48.1
Rhsim10G0052100 Rhododendron simsii HOM05D002465 ORTHO05D036401 1.2e-15 89.4 93 46.2
PSO063G0346 Papaver somniferum HOM05D002465 ORTHO05D005308 1.9e-10 72.0 116 37.1
FAN23G0684 Fragaria x ananassa HOM05D002465 ORTHO05D000592 1.6e-09 68.9 148 31.8
Nitab4.5_0007593g0030 Nicotiana tabacum HOM05D002465 ORTHO05D005308 5.2e-08 63.9 81 42.0
RcHm_v2.0_Chr2g0113271 Rosa chinensis HOM05D002465 ORTHO05D050744 3.4e-07 61.2 40 65.0
Solyc12g044350.1 Solanum lycopersicum HOM05D002465 ORTHO05D005308 7.5e-07 60.1 37 67.6
Peaxi162Scf00023g00818 Petunia axillaris HOM05D002465 ORTHO05D005308 1.3e-06 59.3 49 49.0
CBR_g47978 Chara braunii HOM05D002465 ORTHO05D005308 1.7e-06 58.9 100 28.0
Cre12.g553253 Chlamydomonas reinhardtii HOM05D002465 ORTHO05D145954 2.9e-06 58.2 48 45.8


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