Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG3G900 Aethionema arabicum HOM05D004518 ORTHO05D005434 4.8e-166 587.8 306 100.0
Aa31LG3G910 Aethionema arabicum HOM05D004518 ORTHO05D005434 8.8e-152 540.4 305 93.4
Thhalv10017035m.g Eutrema salsugineum HOM05D004518 ORTHO05D005434 2.2e-126 456.1 306 79.7
Sp4g23460 Schrenkiella parvula HOM05D004518 ORTHO05D005434 5.4e-125 451.4 306 78.1
A09p49580 Brassica napus HOM05D004518 ORTHO05D005434 2.0e-119 433.0 311 76.8
BraA09t40411Z Brassica rapa HOM05D004518 ORTHO05D005434 2.0e-119 433.0 311 76.8
AL4G39130 Arabidopsis lyrata HOM05D004518 ORTHO05D005434 2.6e-119 432.6 306 75.8
AT2G41160 Arabidopsis thaliana HOM05D004518 ORTHO05D005434 9.8e-119 430.6 306 75.2
BraA05t19203Z Brassica rapa HOM05D004518 ORTHO05D005434 9.8e-119 430.6 309 74.8
Thhalv10006131m.g Eutrema salsugineum HOM05D004518 ORTHO05D005434 2.9e-118 429.1 311 74.9
BcaC07g40121 Brassica carinata HOM05D004518 ORTHO05D005434 4.9e-118 428.3 311 74.9
AT3G56740 Arabidopsis thaliana HOM05D004518 ORTHO05D005434 6.4e-118 427.9 311 74.6
BolC8t50814H Brassica oleracea HOM05D004518 ORTHO05D005434 1.9e-117 426.4 311 75.9
Aa31LG10G11580 Aethionema arabicum HOM05D004518 ORTHO05D005434 9.2e-117 424.1 311 74.0
Sp5g05830 Schrenkiella parvula HOM05D004518 ORTHO05D005434 1.2e-116 423.7 310 73.9
Carub.0005s2348 Capsella rubella HOM05D004518 ORTHO05D005434 2.0e-116 422.9 311 74.0
AL5G38100 Arabidopsis lyrata HOM05D004518 ORTHO05D005434 4.6e-116 421.8 311 73.6
CARHR166870 Cardamine hirsuta HOM05D004518 ORTHO05D005434 4.6e-116 421.8 311 73.6
CARHR136250 Cardamine hirsuta HOM05D004518 ORTHO05D005434 7.8e-116 421.0 306 74.5
BolC4t21891H Brassica oleracea HOM05D004518 ORTHO05D005434 1.3e-115 420.2 310 73.5
BcaC07g39982 Brassica carinata HOM05D004518 ORTHO05D005434 5.0e-115 418.3 311 74.0
Carub.0004s2347 Capsella rubella HOM05D004518 ORTHO05D005434 5.6e-114 414.8 306 73.2
C08p31960 Brassica napus HOM05D004518 ORTHO05D005434 4.7e-113 411.8 310 74.2
A05p02070 Brassica napus HOM05D004518 ORTHO05D005434 8.0e-113 411.0 301 73.8
THA.LOC104824396 Tarenaya hassleriana HOM05D004518 ORTHO05D005434 1.4e-112 410.2 312 70.5
THA.LOC104803258 Tarenaya hassleriana HOM05D004518 ORTHO05D005434 3.1e-112 409.1 311 71.1
C04p02460 Brassica napus HOM05D004518 ORTHO05D005434 1.5e-111 406.8 302 72.8
BcaC02g12756 Brassica carinata HOM05D004518 ORTHO05D005434 2.0e-111 406.4 351 65.8
Gohir.D13G001500 Gossypium hirsutum HOM05D004518 ORTHO05D005434 3.5e-108 395.6 310 67.4
Gorai.013G001400 Gossypium raimondii HOM05D004518 ORTHO05D005434 3.5e-108 395.6 310 67.4
COL.COLO4_07077 Corchorus olitorius HOM05D004518 ORTHO05D005434 1.1e-106 390.6 309 67.0
TWI53G0703 Tripterygium wilfordii HOM05D004518 ORTHO05D005434 2.5e-106 389.4 309 67.0
RcHm_v2.0_Chr2g0125741 Rosa chinensis HOM05D004518 ORTHO05D005434 9.5e-106 387.5 309 66.3
Atru.chr1.1396 Acer truncatum HOM05D004518 ORTHO05D005434 8.1e-105 384.4 310 65.5
Potri.006G040100 Populus trichocarpa HOM05D004518 ORTHO05D005434 8.1e-105 384.4 310 66.1
Thecc.05G127700 Theobroma cacao HOM05D004518 ORTHO05D005434 8.1e-105 384.4 310 65.5
Dinv05720 Davidia involucrata HOM05D004518 ORTHO05D005434 1.1e-104 384.0 311 65.3
GSVIVG01025741001 Vitis vinifera HOM05D004518 ORTHO05D005434 1.8e-104 383.3 311 64.6
Hma1.2p1_0252F.1_g102810 Hydrangea macrophylla HOM05D004518 ORTHO05D005434 5.2e-104 381.7 311 64.0
Cfa019996 Carpinus fangiana HOM05D004518 ORTHO05D005434 8.9e-104 380.9 310 65.5
Dinv03206 Davidia involucrata HOM05D004518 ORTHO05D005434 8.9e-104 380.9 310 64.5
MELO3C026597.2 Cucumis melo HOM05D004518 ORTHO05D005434 2.6e-103 379.4 309 64.4
CSS0002759 Camellia sinensis var. sinensis HOM05D004518 ORTHO05D005434 3.4e-103 379.0 311 63.3
CSS0023469 Camellia sinensis var. sinensis HOM05D004518 ORTHO05D005434 3.4e-103 379.0 311 63.3
Sed0000448 Sechium edule HOM05D004518 ORTHO05D005434 3.4e-103 379.0 310 62.9
CsaV3_3G042950 Cucumis sativus L. HOM05D004518 ORTHO05D005434 4.4e-103 378.6 310 63.9
TWI74G1405 Tripterygium wilfordii HOM05D004518 ORTHO05D005434 4.4e-103 378.6 309 66.3
ClCG10G013700 Citrullus lanatus HOM05D004518 ORTHO05D005434 9.9e-103 377.5 310 63.5
FAN05G1433 Fragaria x ananassa HOM05D004518 ORTHO05D005434 2.2e-102 376.3 309 64.4
Actinidia06430 Actinidia chinensis HOM05D004518 ORTHO05D005434 2.9e-102 375.9 311 63.0
PGR031G0872 Punica granatum HOM05D004518 ORTHO05D005434 4.1e-101 372.1 308 62.3
arahy.Tifrunner.gnm1.ann1.5HY1FK Arachis hypogaea HOM05D004518 ORTHO05D005434 5.4e-101 371.7 324 61.7
CiPaw.09G048700 Carya illinoinensis HOM05D004518 ORTHO05D005434 5.4e-101 371.7 306 64.1
FvH4_6g25340 Fragaria vesca HOM05D004518 ORTHO05D005434 5.4e-101 371.7 309 63.8
Lj1g0025115 Lotus japonicus HOM05D004518 ORTHO05D005434 7.1e-101 371.3 309 63.4
TWI77G0289 Tripterygium wilfordii HOM05D004518 ORTHO05D005434 9.2e-101 370.9 305 63.3
CANSAT64G1638 Cannabis sativa HOM05D004518 ORTHO05D005434 1.2e-100 370.5 311 66.2
Duzib106G1523 Durio zibethinus HOM05D004518 ORTHO05D005434 1.6e-100 370.2 306 64.4
Phvul.001G121800 Phaseolus vulgaris HOM05D004518 ORTHO05D005434 1.6e-100 370.2 306 63.4
Glyma.19G129500 Glycine max HOM05D004518 ORTHO05D005434 2.1e-100 369.8 310 63.5
Lalb_Chr14g0365751 Lupinus albus HOM05D004518 ORTHO05D005434 2.1e-100 369.8 306 63.4
Glyma.03G126400 Glycine max HOM05D004518 ORTHO05D005434 3.5e-100 369.0 310 63.5
Peaxi162Scf00696g00027 Petunia axillaris HOM05D004518 ORTHO05D005434 3.5e-100 369.0 312 63.5
MD12G1096200 Malus domestica HOM05D004518 ORTHO05D005434 4.6e-100 368.6 309 63.8
MD14G1089500 Malus domestica HOM05D004518 ORTHO05D005434 4.6e-100 368.6 310 62.6
Prupe.7G034400 Prunus persica HOM05D004518 ORTHO05D005434 6.0e-100 368.2 310 64.2
Manes.09G003700 Manihot esculenta HOM05D004518 ORTHO05D005434 1.0e-99 367.5 307 64.5
EL10Ac3g07249 Beta vulgaris HOM05D004518 ORTHO05D005434 1.7e-99 366.7 311 63.3
Medtr7g089550 Medicago truncatula HOM05D004518 ORTHO05D005434 2.3e-99 366.3 309 63.1
CiPaw.10G040700 Carya illinoinensis HOM05D004518 ORTHO05D005434 8.6e-99 364.4 310 63.9
Haze_20236 Corylus avellana HOM05D002003 ORTHO05D005434 1.1e-98 364.0 328 61.9
Sed0017951 Sechium edule HOM05D004518 ORTHO05D005434 1.1e-98 364.0 306 62.7
FAN09G3120 Fragaria x ananassa HOM05D004518 ORTHO05D005434 1.5e-98 363.6 335 59.7
Rhsim07G0181600 Rhododendron simsii HOM05D004518 ORTHO05D005434 2.5e-98 362.8 317 59.9
Sopen10g031320 Solanum pennellii HOM05D004518 ORTHO05D005434 3.3e-98 362.5 311 61.7
PGSC0003DMG400023695 Solanum tuberosum HOM05D004518 ORTHO05D005434 4.3e-98 362.1 311 62.1
Lalb_Chr24g0400371 Lupinus albus HOM05D004518 ORTHO05D005434 1.2e-97 360.5 309 62.5
VMungo1383G1992 Vigna mungo HOM05D004518 ORTHO05D005434 2.1e-97 359.8 306 62.1
PSO384G3583 Papaver somniferum HOM05D004518 ORTHO05D005434 2.8e-97 359.4 311 62.1
TAR623G1611 Trochodendron aralioides HOM05D004518 ORTHO05D005434 2.8e-97 359.4 308 61.4
Cc06_g19630 Coffea canephora HOM05D004518 ORTHO05D005434 4.7e-97 358.6 311 60.5
Oeu022968.1 Olea europaea HOM05D004518 ORTHO05D005434 1.1e-96 357.5 310 61.0
Migut.J01644 Erythranthe guttata HOM05D004518 ORTHO05D005434 1.4e-96 357.1 312 61.2
PSO339G3176 Papaver somniferum HOM05D004518 ORTHO05D005434 1.4e-96 357.1 311 62.1
Nitab4.5_0001173g0020 Nicotiana tabacum HOM05D004518 ORTHO05D005434 2.4e-96 356.3 308 62.7
Solyc10g080810.2 Solanum lycopersicum HOM05D004518 ORTHO05D005434 2.6e-95 352.8 311 60.5
unitig_744.g24180 Utricularia gibba HOM05D004518 ORTHO05D005434 5.8e-95 351.7 308 60.4
ECA247G2040 Erigeron canadensis HOM05D004518 ORTHO05D005434 9.9e-95 350.9 310 61.3
HanXRQChr10g0292841 Helianthus annuus HOM05D004518 ORTHO05D005434 1.7e-94 350.1 306 60.5
Eucgr.A02232 Eucalyptus grandis HOM05D004518 ORTHO05D005434 2.2e-94 349.7 304 61.2
SGA_v2.0_scaffold66G22264 Striga asiatica HOM05D004518 ORTHO05D005434 2.2e-94 349.7 297 63.3
Oeu063781.2 Olea europaea HOM05D004518 ORTHO05D005434 8.4e-94 347.8 352 54.3
Lsat_1_v5_gn_9_30021 Lactuca sativa HOM05D004518 ORTHO05D005434 4.2e-93 345.5 307 60.9
Ciclev10012184m.g Citrus clementina HOM05D004518 ORTHO05D005434 1.2e-92 344.0 345 57.7
MBI13_g09215_MAGBIO Magnolia biondii HOM05D004518 ORTHO05D005434 1.2e-92 344.0 313 59.7
SGA_v2.0_scaffold69G23161 Striga asiatica HOM05D004518 ORTHO05D005434 1.2e-92 344.0 310 59.7
MSTRG.19796 Avicennia marina HOM05D004518 ORTHO05D005434 7.8e-92 341.3 306 58.5
Eucgr.K01645 Eucalyptus grandis HOM05D004518 ORTHO05D005434 7.8e-92 341.3 310 60.0
Potri.016G035800 Populus trichocarpa HOM05D004518 ORTHO05D005434 4.3e-90 335.5 310 61.0
Gohir.A13G002100 Gossypium hirsutum HOM05D004518 ORTHO05D005434 7.3e-90 334.7 310 60.0
unitig_21.g20688 Utricularia gibba HOM05D004518 ORTHO05D005434 3.6e-89 332.4 306 56.9
CDE08G0004 Ceratophyllum demersum HOM05D004518 ORTHO05D005434 6.2e-89 331.6 311 56.6
MBI19_g14619_MAGBIO Magnolia biondii HOM05D004518 ORTHO05D005434 6.2e-89 331.6 322 57.8
HPP92_018980 Vanilla planifolia HOM05D004518 ORTHO05D005434 1.1e-85 320.9 306 56.2
FAN02G2919 Fragaria x ananassa HOM05D004518 ORTHO05D005434 7.1e-85 318.2 235 68.5
Nn7g36811 Nelumbo nucifera HOM05D004518 ORTHO05D005434 2.7e-84 316.2 287 58.9
Zm00001eb128690 Zea mays HOM05D004518 ORTHO05D005434 3.5e-84 315.8 311 57.2
vmacro05025 Vaccinium macrocarpon HOM05D004518 ORTHO05D005434 1.3e-83 313.9 301 57.5
Aqoxy2G00434 Aquilegia oxysepala HOM05D004518 ORTHO05D005434 2.3e-83 313.2 279 59.1
Duzib128G0186 Durio zibethinus HOM05D004518 ORTHO05D005434 3.0e-83 312.8 235 67.7
QL07p011297 Quercus lobata HOM05D004518 ORTHO05D005434 3.0e-83 312.8 286 60.5
CAN.G128.73 Capsicum annuum HOM05D004518 ORTHO05D005434 6.6e-83 311.6 262 63.0
Os01g0268800 Oryza sativa ssp. japonica HOM05D004518 ORTHO05D005434 2.8e-81 306.2 307 55.7
Peaxi162Scf00076g00330 Petunia axillaris HOM05D004518 ORTHO05D005434 4.8e-81 305.4 300 56.3
CDE08G0582 Ceratophyllum demersum HOM05D004518 ORTHO05D005434 3.4e-79 299.3 309 55.3
Sc13g0001070 Simmondsia chinensis HOM05D004518 ORTHO05D005434 3.5e-76 289.3 197 72.1
arahy.Tifrunner.gnm1.ann1.CJ2XLM Arachis hypogaea HOM05D004518 ORTHO05D005434 4.6e-76 288.9 328 52.1
Psat3g079720 Pisum sativum HOM05D004518 ORTHO05D005434 4.8e-73 278.9 209 67.0
Mapoly0023s0107 Marchantia polymorpha HOM05D004518 ORTHO05D005434 8.1e-73 278.1 309 49.2
AUR62018357 Chenopodium quinoa HOM05D004518 ORTHO05D005434 5.8e-71 271.9 311 52.1
Sabra06G0027100 Salix brachista HOM05D004518 ORTHO05D005434 7.6e-71 271.6 291 56.0
Hund19087 Selenicereus undatus HOM05D004518 ORTHO05D005434 1.0e-70 271.2 310 51.6
Hund24582 Selenicereus undatus HOM05D004518 ORTHO05D005434 4.9e-70 268.9 306 53.3
Pp3c15_13440 Physcomitrium patens HOM05D004518 ORTHO05D005434 8.4e-70 268.1 306 49.3
HPP92_001027 Vanilla planifolia HOM05D004518 ORTHO05D005434 8.4e-70 268.1 265 55.1
AUR62030305 Chenopodium quinoa HOM05D004518 ORTHO05D005434 3.2e-69 266.2 311 51.4
SMO364G0164 Selaginella moellendorffii HOM05D004518 ORTHO05D005434 5.5e-69 265.4 312 50.0
Pp3c9_17200 Physcomitrium patens HOM05D004518 ORTHO05D005434 5.3e-64 248.8 287 48.8
Zm00001eb150410 Zea mays HOM05D004518 ORTHO05D005434 9.0e-64 248.1 265 53.2
Actinidia22259 Actinidia chinensis HOM05D004518 ORTHO05D005434 1.0e-62 244.6 259 56.4
AagrBONN_evm.TU.Sc2ySwM_344.4495 Anthoceros agrestis HOM05D004518 ORTHO05D005434 1.0e-59 234.6 219 54.3
SHI48963 Sapria himalayana HOM05D004518 ORTHO05D005434 1.5e-58 230.7 381 40.2
CBR_g11167 Chara braunii HOM05D004518 ORTHO05D005434 1.9e-58 230.3 317 42.3
TPR.G16082 Trifolium pratense HOM05D002003 ORTHO05D002037 6.3e-57 225.3 222 56.3
ATR0307G082 Amborella trichopoda HOM05D004518 ORTHO05D005434 1.1e-56 224.6 222 56.8
Aqoxy2G02076 Aquilegia oxysepala HOM05D004518 ORTHO05D005434 3.1e-56 223.0 222 55.0
DCAR_020579 Daucus carota HOM05D004518 ORTHO05D005434 6.9e-56 221.9 223 55.6
Lj1A1090G38 Lonicera japonica HOM05D004518 ORTHO05D005434 9.0e-56 221.5 302 45.0
SGA_v2.0_scaffold66G22363 Striga asiatica HOM05D004518 ORTHO05D005434 2.6e-55 219.9 340 42.4
CDE02G2541 Ceratophyllum demersum HOM05D002603 ORTHO05D002907 1.3e-54 217.6 303 43.2
Os01g0806000 Oryza sativa ssp. japonica HOM05D004518 ORTHO05D005434 3.8e-54 216.1 204 57.8
CBR_g18715 Chara braunii HOM05D004518 ORTHO05D005434 1.3e-49 201.1 333 39.6
Lj2A402T37 Lonicera japonica HOM05D004518 ORTHO05D005434 4.8e-49 199.1 185 58.9
Cpa.g.sc92.78 Carica papaya HOM05D004518 ORTHO05D005434 1.1e-40 171.4 170 54.1
Pp3c26_11360 Physcomitrium patens HOM05D004518 ORTHO05D005434 1.7e-38 164.1 237 39.7
BolC4t21949H Brassica oleracea HOM05D004518 ORTHO05D005434 4.5e-31 139.4 253 41.9
Cre08.g386050 Chlamydomonas reinhardtii HOM05D004518 ORTHO05D005434 5.9e-31 139.0 309 34.6
MSTRG.5996 Avicennia marina HOM05D004518 ORTHO05D005434 1.0e-30 138.3 90 71.1
TPR.G27640 Trifolium pratense HOM05D004518 ORTHO05D005434 1.0e-30 138.3 90 74.4
C04p03070 Brassica napus HOM05D004518 ORTHO05D005434 8.8e-27 125.2 261 40.6
SEGI_26369 Sequoiadendron giganteum HOM05D004518 ORTHO05D005434 1.8e-24 117.5 80 66.2
MCO13G544 Micromonas commoda HOM05D004518 ORTHO05D005434 4.9e-17 92.8 326 27.3
Dinv05308 Davidia involucrata HOM05D004518 ORTHO05D005434 7.0e-16 89.0 60 66.7
TAR369G0459 Trochodendron aralioides HOM05D004518 ORTHO05D005434 2.9e-14 83.6 115 48.7
Psat3g079760 Pisum sativum HOM05D004518 ORTHO05D005434 7.2e-13 79.0 91 51.6
FAN02G0789 Fragaria x ananassa HOM05D004518 ORTHO05D011253 1.4e-11 74.7 57 68.4
MBI19_g45264_MAGBIO Magnolia biondii HOM05D004518 ORTHO05D005434 7.5e-10 68.9 160 35.0
PGSC0003DMG400012448 Solanum tuberosum HOM05D004518 ORTHO05D005434 2.0e-07 60.8 42 64.3
PGSC0003DMG400010553 Solanum tuberosum HOM05D004518 ORTHO05D005434 7.8e-07 58.9 38 65.8


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