Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG3G8800 Aethionema arabicum HOM05D003626 ORTHO05D004255 1.8e-302 1042.0 585 100.0
AL7G27480 Arabidopsis lyrata HOM05D003626 ORTHO05D004255 4.9e-167 592.0 610 63.9
Thhalv10024755m.g Eutrema salsugineum HOM05D003626 ORTHO05D004255 1.4e-166 590.5 612 63.1
AT4G25610 Arabidopsis thaliana HOM05D003626 ORTHO05D004255 4.6e-165 585.5 608 63.8
THA.LOC104825103 Tarenaya hassleriana HOM05D003626 ORTHO05D004255 1.3e-164 583.9 595 63.0
THA.LOC104811971 Tarenaya hassleriana HOM05D003626 ORTHO05D004255 2.3e-164 583.2 619 62.0
CARHR233030 Cardamine hirsuta HOM05D003626 ORTHO05D004255 1.5e-163 580.5 614 62.9
Sp7g23640 Schrenkiella parvula HOM05D003626 ORTHO05D004255 2.6e-160 569.7 610 62.3
A03p56130 Brassica napus HOM05D003626 ORTHO05D004255 8.3e-159 564.7 607 56.5
Carub.0007s1537 Capsella rubella HOM05D003626 ORTHO05D004255 3.2e-158 562.8 609 60.6
C07p54460 Brassica napus HOM05D003626 ORTHO05D004255 9.2e-158 561.2 606 59.2
BolC7t45931H Brassica oleracea HOM05D003626 ORTHO05D004255 3.3e-155 552.7 606 58.7
BraA03t14686Z Brassica rapa HOM05D003626 ORTHO05D004255 2.3e-153 546.6 603 56.6
BcaNung03703 Brassica carinata HOM05D003626 ORTHO05D004255 1.7e-151 540.4 611 60.6
BcaC09g50754 Brassica carinata HOM05D003626 ORTHO05D004255 8.3e-151 538.1 617 60.1
C01p21150 Brassica napus HOM05D003626 ORTHO05D004255 2.7e-149 533.1 617 57.5
A01p16870 Brassica napus HOM05D003626 ORTHO05D004255 6.6e-148 528.5 617 57.1
BcaC06g32796 Brassica carinata HOM05D003626 ORTHO05D004255 2.4e-145 520.0 608 58.1
Cpa.g.sc107.76 Carica papaya HOM05D003626 ORTHO05D004255 9.0e-121 438.3 702 43.7
Duzib084G0771 Durio zibethinus HOM05D003626 ORTHO05D004255 2.1e-117 427.2 692 44.4
Thecc.03G180000 Theobroma cacao HOM05D003626 ORTHO05D004255 7.4e-115 418.7 689 41.1
GSVIVG01028908001 Vitis vinifera HOM05D003626 ORTHO05D004255 2.8e-114 416.8 694 43.4
TWI39G1025 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 6.2e-114 415.6 622 45.3
Glyma.10G233400 Glycine max HOM05D003626 ORTHO05D004255 1.5e-112 411.0 666 43.1
Duzib205G1576 Durio zibethinus HOM05D003626 ORTHO05D004255 3.4e-112 409.8 668 41.9
TWI23G0117 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 1.3e-111 407.9 692 42.5
Gohir.A08G098700 Gossypium hirsutum HOM05D003626 ORTHO05D004255 4.9e-111 406.0 663 41.8
Manes.06G149800 Manihot esculenta HOM05D003626 ORTHO05D004255 6.5e-111 405.6 694 41.1
Gorai.004G117900 Gossypium raimondii HOM05D003626 ORTHO05D004255 1.4e-110 404.4 681 40.8
Potri.015G146300 Populus trichocarpa HOM05D003626 ORTHO05D004255 4.2e-110 402.9 680 40.7
Atru.chr1.420 Acer truncatum HOM05D003626 ORTHO05D004255 1.6e-109 401.0 706 46.0
Gorai.008G275600 Gossypium raimondii HOM05D003626 ORTHO05D004255 2.7e-109 400.2 679 42.6
Potri.012G143200 Populus trichocarpa HOM05D003626 ORTHO05D004255 1.0e-108 398.3 675 40.6
Actinidia25889 Actinidia chinensis HOM05D003626 ORTHO05D000962 1.3e-108 397.9 701 41.4
Gohir.A12G256000 Gossypium hirsutum HOM05D003626 ORTHO05D004255 1.3e-108 397.9 682 42.4
Gohir.D08G110300 Gossypium hirsutum HOM05D003626 ORTHO05D004255 1.8e-108 397.5 662 40.8
Gohir.D12G257400 Gossypium hirsutum HOM05D003626 ORTHO05D004255 1.8e-108 397.5 687 42.4
Rhsim03G0188200 Rhododendron simsii HOM05D003626 ORTHO05D004255 3.0e-108 396.7 617 42.6
Sabra15G0155500 Salix brachista HOM05D003626 ORTHO05D004255 3.9e-108 396.4 667 40.8
Duzib068G0520 Durio zibethinus HOM05D003626 ORTHO05D004255 4.3e-107 392.9 628 43.8
Phvul.007G072400 Phaseolus vulgaris HOM05D003626 ORTHO05D004255 5.7e-107 392.5 673 41.3
vmacro06655 Vaccinium macrocarpon HOM05D003626 ORTHO05D004255 5.7e-107 392.5 624 41.8
Manes.14G024700 Manihot esculenta HOM05D003626 ORTHO05D004255 1.1e-105 388.3 700 41.7
arahy.Tifrunner.gnm1.ann1.DJI5YQ Arachis hypogaea HOM05D003626 ORTHO05D004255 1.8e-105 387.5 681 39.5
Nn6g33408 Nelumbo nucifera HOM05D003626 ORTHO05D004255 5.3e-105 386.0 705 41.0
VMungo0720G1546 Vigna mungo HOM05D003626 ORTHO05D004255 5.3e-105 386.0 685 40.1
Cfa016262 Carpinus fangiana HOM05D003626 ORTHO05D004255 2.6e-104 383.6 695 41.2
arahy.Tifrunner.gnm1.ann1.TX8CZR Arachis hypogaea HOM05D003626 ORTHO05D004255 5.9e-104 382.5 680 39.4
DCAR_020260 Daucus carota HOM05D003626 ORTHO05D004255 7.7e-104 382.1 659 40.1
Lj1C1001T6 Lonicera japonica HOM05D003626 ORTHO05D004255 1.0e-103 381.7 704 39.2
RcHm_v2.0_Chr1g0377821 Rosa chinensis HOM05D003626 ORTHO05D004255 6.5e-103 379.0 622 42.8
Sed0000543 Sechium edule HOM05D003626 ORTHO05D004255 3.2e-102 376.7 631 43.7
Lalb_Chr03g0034731 Lupinus albus HOM05D003626 ORTHO05D004255 7.2e-102 375.6 694 39.9
TAR629G0048 Trochodendron aralioides HOM05D003626 ORTHO05D004255 9.4e-102 375.2 688 39.5
Aqoxy7G00296 Aquilegia oxysepala HOM05D003626 ORTHO05D004255 1.2e-101 374.8 677 38.8
CsaV3_3G017260 Cucumis sativus L. HOM05D003626 ORTHO05D004255 1.2e-101 374.8 629 42.8
TPR.G26995 Trifolium pratense HOM05D003626 ORTHO05D004255 6.1e-101 372.5 692 38.9
EL10Ac3g05599 Beta vulgaris HOM05D003626 ORTHO05D004255 7.9e-101 372.1 681 41.6
Prupe.2G297500 Prunus persica HOM05D003626 ORTHO05D004255 1.0e-100 371.7 700 38.6
Medtr1g100810 Medicago truncatula HOM05D003626 ORTHO05D004255 1.4e-100 371.3 686 40.2
Glyma.20G161000 Glycine max HOM05D003626 ORTHO05D004255 2.3e-100 370.5 661 40.8
Dinv28414 Davidia involucrata HOM05D003626 ORTHO05D004255 5.1e-100 369.4 628 42.0
Lalb_Chr19g0130741 Lupinus albus HOM05D003626 ORTHO05D004255 8.8e-100 368.6 674 39.5
MELO3C006924.2 Cucumis melo HOM05D003626 ORTHO05D004255 1.1e-99 368.2 629 42.4
Psat6g197120 Pisum sativum HOM05D003626 ORTHO05D004255 1.5e-99 367.9 632 40.0
FvH4_7g29860 Fragaria vesca HOM05D003626 ORTHO05D004255 7.4e-99 365.5 617 43.1
PGR042G2663 Punica granatum HOM05D003626 ORTHO05D004255 4.8e-98 362.8 675 39.1
Glyma.16G181700 Glycine max HOM05D003626 ORTHO05D004255 6.3e-98 362.5 693 40.5
arahy.Tifrunner.gnm1.ann1.7Y9ZSE Arachis hypogaea HOM05D003626 ORTHO05D004255 2.4e-97 360.5 689 41.2
arahy.Tifrunner.gnm1.ann1.26FV7C Arachis hypogaea HOM05D003626 ORTHO05D004255 4.1e-97 359.8 686 39.9
Hma1.2p1_0227F.1_g095920 Hydrangea macrophylla HOM05D003626 ORTHO05D004255 9.1e-97 358.6 621 40.1
FAN03G0953 Fragaria x ananassa HOM05D003626 ORTHO05D004255 1.2e-96 358.2 618 41.7
SalBow4G0890 Salvia bowleyana HOM05D003626 ORTHO05D004255 1.2e-96 358.2 678 40.7
MD07G1273500 Malus domestica HOM05D003626 ORTHO05D004255 1.0e-95 355.1 626 40.3
CiPaw.05G264100 Carya illinoinensis HOM05D003626 ORTHO05D004255 1.7e-95 354.4 603 41.8
COL.COLO4_28044 Corchorus olitorius HOM05D003626 ORTHO05D004255 1.7e-95 354.4 687 40.8
Ca_10741_v3 Cicer arietinum L. HOM05D003626 ORTHO05D004255 2.2e-95 354.0 682 40.6
Lalb_Chr02g0141141 Lupinus albus HOM05D003626 ORTHO05D004255 1.4e-94 351.3 590 39.8
Ciclev10006582m.g Citrus clementina HOM05D003626 ORTHO05D004255 4.2e-94 349.7 611 43.7
MD01G1205100 Malus domestica HOM05D003626 ORTHO05D004255 7.2e-94 349.0 622 41.8
Hund04768 Selenicereus undatus HOM05D003626 ORTHO05D004255 1.2e-93 348.2 664 41.4
Nitab4.5_0001951g0040 Nicotiana tabacum HOM05D003626 ORTHO05D004255 7.9e-93 345.5 692 37.0
PSO478G3353 Papaver somniferum HOM05D003626 ORTHO05D004255 2.3e-92 344.0 689 36.7
Lsat_1_v5_gn_9_55160 Lactuca sativa HOM05D003626 ORTHO05D004255 2.0e-91 340.9 582 40.4
Nn1g01542 Nelumbo nucifera HOM05D003626 ORTHO05D004255 2.6e-91 340.5 769 35.6
Sabra12G0107600 Salix brachista HOM05D003626 ORTHO05D004255 2.6e-91 340.5 689 37.3
CANSAT21G2257 Cannabis sativa HOM05D003626 ORTHO05D004255 4.4e-91 339.7 616 42.0
TWI14G0197 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 4.4e-91 339.7 631 41.5
Nitab4.5_0000080g0130 Nicotiana tabacum HOM05D003626 ORTHO05D004255 4.8e-90 336.3 624 38.3
PSO782G4415 Papaver somniferum HOM05D003626 ORTHO05D004255 1.4e-89 334.7 627 38.0
FAN01G0376 Fragaria x ananassa HOM05D003626 ORTHO05D004255 1.8e-89 334.3 625 39.8
HanXRQChr14g0462361 Helianthus annuus HOM05D003626 ORTHO05D004255 3.1e-89 333.6 650 36.9
MSTRG.27103 Avicennia marina HOM05D003626 ORTHO05D004255 4.1e-89 333.2 616 40.7
AUR62021157 Chenopodium quinoa HOM05D003626 ORTHO05D004255 5.3e-89 332.8 612 46.1
FAN10G2476 Fragaria x ananassa HOM05D003626 ORTHO05D004255 5.3e-89 332.8 618 40.6
FAN10G0313 Fragaria x ananassa HOM05D003626 ORTHO05D004255 1.5e-88 331.3 618 40.6
Oeu004107.1 Olea europaea HOM05D003626 ORTHO05D004255 1.3e-87 328.2 723 35.5
Lj2g0008392 Lotus japonicus HOM05D003626 ORTHO05D004255 3.8e-87 326.6 665 40.9
Lalb_Chr06g0161221 Lupinus albus HOM05D003626 ORTHO05D004255 8.5e-87 325.5 681 37.7
FAN03G3125 Fragaria x ananassa HOM05D003626 ORTHO05D004255 3.2e-86 323.6 618 40.5
AUR62015951 Chenopodium quinoa HOM05D003626 ORTHO05D004255 2.1e-85 320.9 693 38.2
Phvul.004G113400 Phaseolus vulgaris HOM05D003626 ORTHO05D004255 1.8e-84 317.8 674 37.5
Peaxi162Scf00444g00425 Petunia axillaris HOM05D003626 ORTHO05D004255 4.4e-83 313.2 689 35.3
ClCG05G008170 Citrullus lanatus HOM05D003626 ORTHO05D004255 1.3e-82 311.6 740 36.2
SGA_v2.0_scaffold60G21078 Striga asiatica HOM05D003626 ORTHO05D004255 1.7e-82 311.2 631 40.7
Nitab4.5_0004439g0040 Nicotiana tabacum HOM05D003626 ORTHO05D004255 4.8e-82 309.7 692 35.1
Ah.07g206910 Amaranthus hybridus HOM05D003626 ORTHO05D004255 6.3e-82 309.3 480 42.7
Sc19g0001390 Simmondsia chinensis HOM05D003626 ORTHO05D004255 6.3e-82 309.3 658 38.8
DCAR_029574 Daucus carota HOM05D003626 ORTHO05D004255 1.1e-81 308.5 245 61.6
ECA238G3668 Erigeron canadensis HOM05D003626 ORTHO05D004255 5.3e-81 306.2 755 33.5
MSTRG.82 Avicennia marina HOM05D003626 ORTHO05D004255 1.6e-80 304.7 620 36.3
Cc02_g02700 Coffea canephora HOM05D003626 ORTHO05D004255 1.6e-80 304.7 687 35.5
Migut.F01102 Erythranthe guttata HOM05D003626 ORTHO05D004255 2.6e-80 303.9 592 41.6
FAN06G2167 Fragaria x ananassa HOM05D003626 ORTHO05D004255 1.7e-79 301.2 529 42.3
PGR142G2556 Punica granatum HOM05D003626 ORTHO05D004255 1.7e-79 301.2 609 36.0
TAR636G1367 Trochodendron aralioides HOM05D003626 ORTHO05D004255 5.5e-78 296.2 678 35.0
Oeu061653.1 Olea europaea HOM05D003626 ORTHO05D004255 9.4e-78 295.4 638 37.8
Psat0s4127g0040 Pisum sativum HOM05D003626 ORTHO05D004255 1.6e-77 294.7 627 38.3
Eucgr.L00411 Eucalyptus grandis HOM05D003626 ORTHO05D004255 2.7e-77 293.9 247 59.9
Lj5g0006318 Lotus japonicus HOM05D003626 ORTHO05D004255 2.7e-77 293.9 486 41.4
Sed0014313 Sechium edule HOM05D003626 ORTHO05D004255 4.7e-77 293.1 642 38.8
PGSC0003DMG400015791 Solanum tuberosum HOM05D003626 ORTHO05D004255 4.7e-77 293.1 693 35.5
TPR.G8172 Trifolium pratense HOM05D003626 ORTHO05D004255 1.8e-76 291.2 523 39.8
Migut.F00325 Erythranthe guttata HOM05D003626 ORTHO05D004255 2.3e-76 290.8 641 39.5
Haze_00014 Corylus avellana HOM05D003626 ORTHO05D004255 1.2e-75 288.5 750 35.2
Medtr6g053660 Medicago truncatula HOM05D003626 ORTHO05D004255 3.4e-75 287.0 641 39.2
ATR0680G428 Amborella trichopoda HOM05D003626 ORTHO05D004255 2.2e-74 284.3 328 47.0
Solyc03g025440.3 Solanum lycopersicum HOM05D003626 ORTHO05D004255 3.7e-74 283.5 695 34.5
Sopen03g004280 Solanum pennellii HOM05D003626 ORTHO05D004255 1.1e-73 282.0 694 34.6
ECA233G2749 Erigeron canadensis HOM05D003626 ORTHO05D004255 7.0e-73 279.3 543 37.9
Dinv35227 Davidia involucrata HOM05D003626 ORTHO05D004255 1.6e-72 278.1 482 43.8
HPP92_001476 Vanilla planifolia HOM05D003626 ORTHO05D004255 5.9e-72 276.2 336 45.8
TAR375G0013 Trochodendron aralioides HOM05D003626 ORTHO05D004255 7.7e-72 275.8 198 68.2
CAN.G1175.16 Capsicum annuum HOM05D003626 ORTHO05D004255 1.3e-71 275.0 480 39.6
Nitab4.5_0000084g0130 Nicotiana tabacum HOM05D003626 ORTHO05D004255 6.5e-71 272.7 696 33.5
CDE06G1616 Ceratophyllum demersum HOM05D003626 ORTHO05D004255 4.2e-70 270.0 641 33.5
Sopen06g011810 Solanum pennellii HOM05D003626 ORTHO05D004255 3.6e-69 266.9 244 54.5
VMungo0464G2114 Vigna mungo HOM05D003626 ORTHO05D002946 1.5e-67 261.5 259 51.4
Zm00001eb095880 Zea mays HOM05D003626 ORTHO05D004255 6.3e-66 256.1 539 35.4
Solyc06g036060.4 Solanum lycopersicum HOM05D003626 ORTHO05D004255 1.4e-65 255.0 565 35.0
SEGI_20458 Sequoiadendron giganteum HOM05D003626 ORTHO05D004255 4.1e-65 253.4 228 56.1
unitig_0.g459 Utricularia gibba HOM05D003626 ORTHO05D004255 1.0e-63 248.8 237 56.5
Os09g0570200 Oryza sativa ssp. japonica HOM05D003626 ORTHO05D004255 3.3e-62 243.8 550 34.9
Eucgr.E00978 Eucalyptus grandis HOM05D003626 ORTHO05D004255 1.0e-60 238.8 247 52.2
Peaxi162Scf00848g00116 Petunia axillaris HOM05D003626 ORTHO05D004255 1.0e-60 238.8 220 57.3
Eucgr.A02765 Eucalyptus grandis HOM05D003626 ORTHO05D004255 3.0e-60 237.3 189 60.3
Sc13g0008850 Simmondsia chinensis HOM05D003626 ORTHO05D004255 4.4e-59 233.4 253 48.6
unitig_22.g5223 Utricularia gibba HOM05D003626 ORTHO05D004255 3.7e-58 230.3 237 51.1
SMO347G0135 Selaginella moellendorffii HOM05D003626 ORTHO05D004255 3.3e-54 217.2 204 52.5
Mapoly0003s0245 Marchantia polymorpha HOM05D003626 ORTHO05D004255 5.8e-51 206.5 202 49.0
CDE02G1538 Ceratophyllum demersum HOM05D003626 ORTHO05D004255 2.3e-47 194.5 666 29.7
FAN06G1666 Fragaria x ananassa HOM05D003626 ORTHO05D004255 2.0e-43 181.4 669 30.6
CSS0037833 Camellia sinensis var. sinensis HOM05D003626 ORTHO05D004255 6.0e-40 169.9 136 64.0
CSS0041965 Camellia sinensis var. sinensis HOM05D003626 ORTHO05D004255 3.9e-39 167.2 126 63.5
Pp3c10_4090 Physcomitrium patens HOM05D003626 ORTHO05D004255 1.2e-37 162.2 204 45.1
HPP92_011473 Vanilla planifolia HOM05D003626 ORTHO05D004255 1.5e-30 138.7 158 51.3
SEGI_33334 Sequoiadendron giganteum HOM05D003626 ORTHO05D004255 1.9e-30 138.3 138 50.7
Zm00001eb224460 Zea mays HOM05D003626 ORTHO05D004255 1.6e-29 135.2 406 33.0
SMO356G0700 Selaginella moellendorffii HOM05D003626 ORTHO05D004255 4.0e-28 130.6 201 40.8
SEGI_03018 Sequoiadendron giganteum HOM05D003626 ORTHO05D004255 3.0e-23 114.4 82 68.3
AagrBONN_evm.TU.Sc2ySwM_344.1743 Anthoceros agrestis HOM05D003626 ORTHO05D004255 3.1e-20 104.4 210 35.2
BraA01t01640Z Brassica rapa HOM05D002456 ORTHO05D002994 2.6e-19 101.3 156 48.7
Glyma.09G136202 Glycine max HOM05D003626 ORTHO05D004255 3.0e-15 87.8 64 65.6
CSS0005394 Camellia sinensis var. sinensis HOM05D003626 ORTHO05D004255 4.3e-14 84.0 364 28.3
Lalb_Chr21g0305131 Lupinus albus HOM05D003626 ORTHO05D004255 1.8e-12 78.6 484 26.9
Pp3c10_4110 Physcomitrium patens HOM05D003626 ORTHO05D004255 3.8e-10 70.9 96 41.7
HPP92_001484 Vanilla planifolia HOM05D003626 ORTHO05D004255 3.2e-09 67.8 60 51.7
HPP92_028446 Vanilla planifolia HOM05D003626 ORTHO05D004255 1.3e-07 62.4 116 36.2
MBI17_g24687_MAGBIO Magnolia biondii HOM05D003626 ORTHO05D004255 2.3e-07 61.6 392 25.0
AagrBONN_evm.TU.Sc2ySwM_362.2615 Anthoceros agrestis HOM05D003626 ORTHO05D004255 3.9e-07 60.8 173 30.1
HPP92_001477 Vanilla planifolia HOM05D003626 ORTHO05D004255 3.9e-07 60.8 66 47.0
Ca_13872_v3 Cicer arietinum L. HOM05D003626 ORTHO05D004255 8.7e-07 59.7 375 30.4
TAR375G0355 Trochodendron aralioides HOM05D003626 ORTHO05D004255 9.6e-06 56.2 41 63.4


User provided reference genes

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