Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG3G8600 Aethionema arabicum HOM05D006981 ORTHO05D008719 1.0e-60 236.5 118 100.0
BcaB08g35575 Brassica carinata HOM05D006981 ORTHO05D008719 2.9e-50 201.8 117 84.6
Thhalv10015042m.g Eutrema salsugineum HOM05D006981 ORTHO05D008719 2.9e-50 201.8 119 84.0
A10p09920 Brassica napus HOM05D006981 ORTHO05D008719 1.2e-48 196.4 116 82.8
AL8G26600 Arabidopsis lyrata HOM05D006981 ORTHO05D008719 2.0e-48 195.7 118 83.1
AT5G52220 Arabidopsis thaliana HOM05D006981 ORTHO05D008719 2.0e-48 195.7 118 83.1
BcaC04g20601 Brassica carinata HOM05D006981 ORTHO05D008719 3.5e-48 194.9 116 83.6
C09p41630 Brassica napus HOM05D006981 ORTHO05D008719 3.5e-48 194.9 116 83.6
BolC9t57050H Brassica oleracea HOM05D006981 ORTHO05D008719 3.5e-48 194.9 116 83.6
Carub.0008s1231 Capsella rubella HOM05D006981 ORTHO05D008719 6.0e-48 194.1 117 81.2
BraA10t43072Z Brassica rapa HOM05D006981 ORTHO05D008719 7.8e-48 193.7 116 81.0
CARHR265140 Cardamine hirsuta HOM05D006981 ORTHO05D008719 2.5e-46 188.7 118 78.8
Sp6g14470 Schrenkiella parvula HOM05D006981 ORTHO05D008719 3.3e-46 188.3 115 81.7
THA.LOC104825097 Tarenaya hassleriana HOM05D006981 ORTHO05D008719 2.0e-43 179.1 117 75.2
TWI14G0356 Tripterygium wilfordii HOM05D006981 ORTHO05D008719 6.2e-37 157.5 118 69.5
Thecc.03G174800 Theobroma cacao HOM05D006981 ORTHO05D008719 2.3e-36 155.6 120 65.0
CDE08G1025 Ceratophyllum demersum HOM05D006981 ORTHO05D008719 3.1e-36 155.2 121 62.8
Duzib084G0697 Durio zibethinus HOM05D006981 ORTHO05D008719 4.0e-36 154.8 121 66.1
CAN.G28.6 Capsicum annuum HOM05D006981 ORTHO05D008719 2.0e-35 152.5 119 65.5
AUR62021209 Chenopodium quinoa HOM05D006981 ORTHO05D008719 2.0e-35 152.5 120 65.0
GSVIVG01010548001 Vitis vinifera HOM05D006981 ORTHO05D008719 2.6e-35 152.1 119 64.7
CsaV3_5G005720 Cucumis sativus L. HOM05D006981 ORTHO05D008719 4.4e-35 151.4 119 64.7
Glyma.09G140600 Glycine max HOM05D006981 ORTHO05D008719 4.4e-35 151.4 114 64.0
Cpa.g.sc107.36 Carica papaya HOM05D006981 ORTHO05D008719 5.8e-35 151.0 120 62.5
Nitab4.5_0019580g0020 Nicotiana tabacum HOM05D006981 ORTHO05D008719 5.8e-35 151.0 120 65.8
Phvul.004G118000 Phaseolus vulgaris HOM05D006981 ORTHO05D008719 5.8e-35 151.0 114 65.8
VMungo0464G1391 Vigna mungo HOM05D006981 ORTHO05D008719 5.8e-35 151.0 114 65.8
Gohir.D08G111300 Gossypium hirsutum HOM05D006981 ORTHO05D008719 7.6e-35 150.6 117 65.0
Gorai.004G119200 Gossypium raimondii HOM05D006981 ORTHO05D008719 7.6e-35 150.6 117 65.0
vmacro06697 Vaccinium macrocarpon HOM05D006981 ORTHO05D008719 7.6e-35 150.6 120 64.2
Duzib205G0859 Durio zibethinus HOM05D006981 ORTHO05D008719 9.9e-35 150.2 121 62.0
ClCG01G005500 Citrullus lanatus HOM05D003170 ORTHO05D008719 1.3e-34 149.8 119 64.7
Glyma.16G194500 Glycine max HOM05D006981 ORTHO05D008719 1.3e-34 149.8 114 63.2
AUR62016001 Chenopodium quinoa HOM05D006981 ORTHO05D008719 1.7e-34 149.4 120 62.5
MELO3C005381.2 Cucumis melo HOM05D006981 ORTHO05D008719 2.2e-34 149.1 119 64.7
TAR375G0811 Trochodendron aralioides HOM05D006981 ORTHO05D008719 2.2e-34 149.1 119 67.2
Ah.13g068510 Amaranthus hybridus HOM05D006981 ORTHO05D008719 3.8e-34 148.3 124 62.1
Manes.06G146000 Manihot esculenta HOM05D006981 ORTHO05D008719 3.8e-34 148.3 119 65.5
PGSC0003DMG400015647 Solanum tuberosum HOM05D006981 ORTHO05D008719 3.8e-34 148.3 119 63.0
SGA_v2.0_scaffold2G01066 Striga asiatica HOM05D006981 ORTHO05D008719 3.8e-34 148.3 121 62.0
Ciclev10006231m.g Citrus clementina HOM05D006981 ORTHO05D008719 4.9e-34 147.9 120 64.2
Nitab4.5_0000080g0060 Nicotiana tabacum HOM05D006981 ORTHO05D008719 4.9e-34 147.9 119 64.7
Eucgr.K00242 Eucalyptus grandis HOM05D006981 ORTHO05D008719 6.4e-34 147.5 122 62.3
Hund11756 Selenicereus undatus HOM05D006981 ORTHO05D008719 6.4e-34 147.5 119 61.3
EL10Ac3g05672 Beta vulgaris HOM05D006981 ORTHO05D008719 8.4e-34 147.1 121 62.8
QL09p014567 Quercus lobata HOM05D006981 ORTHO05D008719 8.4e-34 147.1 119 63.9
Solyc06g051300.3 Solanum lycopersicum HOM05D006981 ORTHO05D008719 8.4e-34 147.1 119 61.3
COL.COLO4_14290 Corchorus olitorius HOM05D006981 ORTHO05D008719 1.1e-33 146.7 121 62.8
Manes.09G002400 Manihot esculenta HOM05D006981 ORTHO05D008719 1.9e-33 146.0 119 64.7
Lj2g0020265 Lotus japonicus HOM05D006981 ORTHO05D008719 2.4e-33 145.6 114 63.2
Migut.F00354 Erythranthe guttata HOM05D006981 ORTHO05D008719 3.2e-33 145.2 130 59.2
Hma1.2p1_0270F.1_g108180 Hydrangea macrophylla HOM05D006981 ORTHO05D008719 3.2e-33 145.2 119 65.5
Sopen06g017220 Solanum pennellii HOM05D006981 ORTHO05D008719 3.2e-33 145.2 117 62.4
PGR142G3060 Punica granatum HOM05D006981 ORTHO05D008719 4.1e-33 144.8 122 62.3
Gohir.A08G100300 Gossypium hirsutum HOM05D006981 ORTHO05D008719 5.4e-33 144.4 123 61.0
Atru.chr1.479 Acer truncatum HOM05D006981 ORTHO05D008719 7.1e-33 144.1 120 61.7
DCAR_009354 Daucus carota HOM05D006981 ORTHO05D008719 9.2e-33 143.7 121 62.0
CiPaw.03G105000 Carya illinoinensis HOM05D006981 ORTHO05D008719 1.6e-32 142.9 123 63.4
Potri.015G140200 Populus trichocarpa HOM05D006981 ORTHO05D008719 1.6e-32 142.9 127 61.4
Sabra15G0150900 Salix brachista HOM05D006981 ORTHO05D008719 2.1e-32 142.5 126 61.1
MSTRG.27124 Avicennia marina HOM05D006981 ORTHO05D008719 2.7e-32 142.1 121 62.0
arahy.Tifrunner.gnm1.ann1.T9EWQW Arachis hypogaea HOM05D006981 ORTHO05D008719 3.5e-32 141.7 123 59.3
MBI17_g21049_MAGBIO Magnolia biondii HOM05D006981 ORTHO05D008719 3.5e-32 141.7 119 61.3
Oeu056238.2 Olea europaea HOM05D006981 ORTHO05D008719 3.5e-32 141.7 121 62.8
Sc19g0001580 Simmondsia chinensis HOM05D006981 ORTHO05D008719 3.5e-32 141.7 117 64.1
arahy.Tifrunner.gnm1.ann1.8WRD93 Arachis hypogaea HOM05D006981 ORTHO05D008719 4.6e-32 141.4 124 58.9
Lalb_Chr19g0130931 Lupinus albus HOM05D006981 ORTHO05D008719 4.6e-32 141.4 117 62.4
FvH4_7g29270 Fragaria vesca HOM05D006981 ORTHO05D008719 6.0e-32 141.0 115 63.5
FAN03G1713 Fragaria x ananassa HOM05D006981 ORTHO05D008719 6.0e-32 141.0 115 63.5
FAN10G3446 Fragaria x ananassa HOM05D006981 ORTHO05D008719 6.0e-32 141.0 115 63.5
Medtr6g471020 Medicago truncatula HOM05D006981 ORTHO05D008719 6.0e-32 141.0 114 62.3
FAN03G1998 Fragaria x ananassa HOM05D006981 ORTHO05D008719 1.0e-31 140.2 115 63.5
FAN01G2034 Fragaria x ananassa HOM05D006981 ORTHO05D008719 1.7e-31 139.4 115 62.6
RcHm_v2.0_Chr1g0377021 Rosa chinensis HOM05D006981 ORTHO05D008719 1.7e-31 139.4 116 64.7
Sed0011448 Sechium edule HOM05D006981 ORTHO05D008719 1.7e-31 139.4 120 61.7
Cfa008306 Carpinus fangiana HOM05D006981 ORTHO05D008719 2.3e-31 139.0 121 62.0
Haze_13729 Corylus avellana HOM05D006981 ORTHO05D008719 3.0e-31 138.7 121 62.0
Nn4g26525 Nelumbo nucifera HOM05D006981 ORTHO05D008719 3.9e-31 138.3 121 61.2
HanXRQChr08g0209251 Helianthus annuus HOM05D006981 ORTHO05D008719 6.6e-31 137.5 123 60.2
Actinidia32871 Actinidia chinensis HOM05D006981 ORTHO05D008719 8.6e-31 137.1 141 53.9
Aqoxy7G00390 Aquilegia oxysepala HOM05D006981 ORTHO05D008719 1.1e-30 136.7 119 58.0
SalBow4G2131 Salvia bowleyana HOM05D006981 ORTHO05D008719 1.1e-30 136.7 118 61.0
Ca_25351_v3 Cicer arietinum L. HOM05D000367 ORTHO05D001438 1.5e-30 136.3 114 58.8
MD07G1267100 Malus domestica HOM05D006981 ORTHO05D008719 1.5e-30 136.3 119 60.5
CANSAT21G0349 Cannabis sativa HOM05D006981 ORTHO05D008719 1.9e-30 136.0 114 61.4
Cc02_g03150 Coffea canephora HOM05D006981 ORTHO05D008719 1.9e-30 136.0 134 54.5
ECA233G5478 Erigeron canadensis HOM05D006981 ORTHO05D008719 1.9e-30 136.0 133 54.9
Lj1C995G12 Lonicera japonica HOM05D006981 ORTHO05D008719 1.9e-30 136.0 123 57.7
CSS0044451 Camellia sinensis var. sinensis HOM05D006981 ORTHO05D008719 2.5e-30 135.6 113 64.6
Lsat_1_v5_gn_8_8340 Lactuca sativa HOM05D006981 ORTHO05D008719 2.5e-30 135.6 126 57.9
Prupe.2G292700 Prunus persica HOM05D006981 ORTHO05D008719 2.5e-30 135.6 116 62.1
PSO782G4575 Papaver somniferum HOM05D006981 ORTHO05D008719 3.3e-30 135.2 129 58.1
HPP92_028124 Vanilla planifolia HOM05D006981 ORTHO05D008719 4.3e-30 134.8 119 58.8
FAN06G1994 Fragaria x ananassa HOM05D006981 ORTHO05D008719 5.6e-30 134.4 114 62.3
SalBow4G1422 Salvia bowleyana HOM05D006981 ORTHO05D008719 5.6e-30 134.4 118 60.2
Zm00001eb309380 Zea mays HOM05D006981 ORTHO05D008719 5.6e-30 134.4 125 57.6
unitig_747.g21767 Utricularia gibba HOM05D006981 ORTHO05D008719 9.6e-30 133.7 121 55.4
PSO478G2189 Papaver somniferum HOM05D006981 ORTHO05D008719 2.1e-29 132.5 130 56.9
HPP92_020865 Vanilla planifolia HOM05D006981 ORTHO05D008719 4.7e-29 131.3 119 57.1
FAN06G2660 Fragaria x ananassa HOM05D006981 ORTHO05D008719 6.9e-28 127.5 114 60.5
SHI13798 Sapria himalayana HOM05D006981 ORTHO05D008719 2.6e-27 125.6 148 48.6
SMO141G0174 Selaginella moellendorffii HOM05D006981 ORTHO05D008719 7.1e-25 117.5 117 52.1
Pp3c14_5260 Physcomitrium patens HOM05D006981 ORTHO05D008719 3.5e-24 115.2 127 52.0
AagrBONN_evm.TU.Sc2ySwM_369.83 Anthoceros agrestis HOM05D006981 ORTHO05D008719 1.5e-22 109.8 121 47.9
Peaxi162Scf00040g00323 Petunia axillaris HOM05D006981 ORTHO05D008719 1.9e-22 109.4 119 52.1
Manes.14G129556 Manihot esculenta HOM05D006981 ORTHO05D008719 7.3e-22 107.5 80 68.8
Mapoly0027s0013 Marchantia polymorpha HOM05D006981 ORTHO05D008719 5.3e-20 101.3 129 50.4
Actinidia34099 Actinidia chinensis HOM05D006981 ORTHO05D008719 3.8e-18 95.1 72 62.5
Psat1g030600 Pisum sativum HOM05D006981 ORTHO05D008719 1.0e-15 87.0 63 66.7
PRCOL_00004746 Prasinoderma coloniale HOM05D006981 ORTHO05D008719 2.3e-15 85.9 121 38.0
Cre06.g281750 Chlamydomonas reinhardtii HOM05D006981 ORTHO05D008719 5.6e-14 81.3 115 40.0
Hma1.2p1_0270F.1_g108170 Hydrangea macrophylla HOM05D006981 ORTHO05D008719 2.0e-11 72.8 58 60.3
SEGI_30853 Sequoiadendron giganteum HOM05D006981 ORTHO05D008719 4.5e-11 71.6 84 48.8
Psat1g030360 Pisum sativum HOM05D006981 ORTHO05D008719 1.3e-10 70.1 58 53.4
CBR_g4805 Chara braunii HOM05D006981 ORTHO05D008719 3.5e-08 62.0 108 36.1


User provided reference genes

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