Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG3G8570 Aethionema arabicum HOM05D006363 ORTHO05D007920 1.7e-105 386.0 193 100.0
Thhalv10015742m.g Eutrema salsugineum HOM05D006363 ORTHO05D007920 3.4e-85 318.5 197 82.2
THA.LOC104811988 Tarenaya hassleriana HOM05D006363 ORTHO05D007920 2.9e-84 315.5 194 80.4
CARHR265110 Cardamine hirsuta HOM05D006363 ORTHO05D007920 3.8e-84 315.1 198 81.3
BcaC01g06171 Brassica carinata HOM05D006363 ORTHO05D007920 9.3e-83 310.5 197 80.2
BraA03t10870Z Brassica rapa HOM05D006363 ORTHO05D007920 2.7e-82 308.9 197 79.7
BolC3t14244H Brassica oleracea HOM05D006363 ORTHO05D007920 3.5e-82 308.5 197 79.2
C03p18470 Brassica napus HOM05D006363 ORTHO05D007920 4.6e-82 308.1 197 79.7
Carub.0008s1228 Capsella rubella HOM05D006363 ORTHO05D007920 6.1e-82 307.8 198 79.8
Sp6g14440 Schrenkiella parvula HOM05D006363 ORTHO05D007920 6.1e-82 307.8 199 79.4
BcaB01g04190 Brassica carinata HOM05D006363 ORTHO05D007920 5.1e-81 304.7 197 78.2
Psat6g200600 Pisum sativum HOM05D006363 ORTHO05D007920 5.1e-81 304.7 196 77.6
FAN10G0438 Fragaria x ananassa HOM05D006363 ORTHO05D007920 6.3e-79 297.7 195 75.9
FvH4_7g29240 Fragaria vesca HOM05D006363 ORTHO05D007920 8.2e-79 297.4 195 75.9
FAN06G3284 Fragaria x ananassa HOM05D006363 ORTHO05D007920 1.1e-78 297.0 195 75.4
CiPaw.03G104700 Carya illinoinensis HOM05D006363 ORTHO05D007920 1.4e-78 296.6 194 75.8
AL8G26570 Arabidopsis lyrata HOM05D006363 ORTHO05D007920 1.8e-78 296.2 201 76.6
FAN06G3928 Fragaria x ananassa HOM05D006363 ORTHO05D007920 1.8e-78 296.2 195 75.4
Medtr1g100753 Medicago truncatula HOM05D006363 ORTHO05D007920 1.8e-78 296.2 196 73.5
Atru.chr1.482 Acer truncatum HOM05D006363 ORTHO05D007920 3.1e-78 295.4 194 75.3
TWI39G0139 Tripterygium wilfordii HOM05D006363 ORTHO05D007920 5.3e-78 294.7 197 73.1
FAN03G1027 Fragaria x ananassa HOM05D006363 ORTHO05D007920 9.0e-78 293.9 195 74.9
RcHm_v2.0_Chr1g0376991 Rosa chinensis HOM05D006363 ORTHO05D007920 2.6e-77 292.4 195 73.8
Sabra15G0151200 Salix brachista HOM05D006363 ORTHO05D007920 3.4e-77 292.0 197 73.1
AT5G52190 Arabidopsis thaliana HOM05D006363 ORTHO05D007920 4.5e-77 291.6 201 74.1
Cfa008303 Carpinus fangiana HOM05D006363 ORTHO05D007920 7.7e-77 290.8 197 73.1
Ca_10782_v3 Cicer arietinum L. HOM05D006363 ORTHO05D007920 7.7e-77 290.8 197 73.1
Haze_13734 Corylus avellana HOM05D006363 ORTHO05D007920 7.7e-77 290.8 197 73.6
Glyma.10G237500 Glycine max HOM05D006363 ORTHO05D007920 7.7e-77 290.8 197 72.6
QL09p014582 Quercus lobata HOM05D006363 ORTHO05D007920 1.0e-76 290.4 196 74.0
TPR.G14326 Trifolium pratense HOM05D006363 ORTHO05D007920 1.3e-76 290.0 196 73.0
Manes.07G111200 Manihot esculenta HOM05D006363 ORTHO05D007920 6.5e-76 287.7 190 73.7
Potri.015G140600 Populus trichocarpa HOM05D006363 ORTHO05D007920 8.5e-76 287.3 199 70.9
Ciclev10007013m.g Citrus clementina HOM05D006363 ORTHO05D007920 7.2e-75 284.3 197 72.6
Glyma.20G157100 Glycine max HOM05D006363 ORTHO05D007920 7.2e-75 284.3 196 73.0
MD01G1199000 Malus domestica HOM05D006363 ORTHO05D007920 1.2e-74 283.5 197 72.6
FAN03G1282 Fragaria x ananassa HOM05D006363 ORTHO05D007920 2.1e-74 282.7 195 73.3
Phvul.007G068100 Phaseolus vulgaris HOM05D006363 ORTHO05D007920 2.1e-74 282.7 194 72.7
Prupe.2G292400 Prunus persica HOM05D006363 ORTHO05D007920 3.6e-74 282.0 198 73.7
MD07G1266800 Malus domestica HOM05D006363 ORTHO05D007920 4.6e-74 281.6 195 72.8
PGR042G3170 Punica granatum HOM05D006363 ORTHO05D007920 1.0e-73 280.4 199 70.9
VMungo0720G1872 Vigna mungo HOM05D006363 ORTHO05D007920 2.3e-73 279.3 196 70.9
LjContig00238g0019616 Lotus japonicus HOM05D006363 ORTHO05D007920 3.0e-73 278.9 193 70.5
Cpa.g.sc107.33 Carica papaya HOM05D006363 ORTHO05D007920 8.8e-73 277.3 197 69.0
Lalb_Chr02g0140961 Lupinus albus HOM05D006363 ORTHO05D007920 8.8e-73 277.3 191 71.2
Duzib205G1779 Durio zibethinus HOM05D006363 ORTHO05D007920 2.5e-72 275.8 197 71.1
Rhsim09G0197500 Rhododendron simsii HOM05D006363 ORTHO05D007920 2.8e-71 272.3 193 72.0
COL.COLO4_14288 Corchorus olitorius HOM05D006363 ORTHO05D007920 4.8e-71 271.6 194 71.1
Gohir.A12G258900 Gossypium hirsutum HOM05D006363 ORTHO05D007920 8.2e-71 270.8 194 70.6
Gorai.008G278600 Gossypium raimondii HOM05D006363 ORTHO05D007920 1.8e-70 269.6 194 70.1
CsaV3_3G016980 Cucumis sativus L. HOM05D006363 ORTHO05D007920 3.1e-70 268.9 196 67.9
Gohir.D12G260100 Gossypium hirsutum HOM05D006363 ORTHO05D007920 3.1e-70 268.9 194 70.1
Thecc.03G174500 Theobroma cacao HOM05D006363 ORTHO05D007920 3.1e-70 268.9 197 69.5
Oeu062762.2 Olea europaea HOM05D006363 ORTHO05D007920 5.3e-70 268.1 199 70.9
Peaxi162Scf00915g00018 Petunia axillaris HOM05D006363 ORTHO05D007920 1.5e-69 266.5 192 70.3
vmacro09843 Vaccinium macrocarpon HOM05D006363 ORTHO05D007920 2.6e-69 265.8 193 70.5
MELO3C006895.2 Cucumis melo HOM05D006363 ORTHO05D007920 4.5e-69 265.0 196 67.9
Sed0019375 Sechium edule HOM05D006363 ORTHO05D007920 1.0e-68 263.8 200 68.0
Solyc03g025990.1 Solanum lycopersicum HOM05D006363 ORTHO05D007920 1.9e-67 259.6 193 69.4
Migut.F01133 Erythranthe guttata HOM05D006363 ORTHO05D007920 2.5e-67 259.2 192 67.7
Nitab4.5_0000716g0210 Nicotiana tabacum HOM05D006363 ORTHO05D007920 3.2e-67 258.8 190 69.5
ECA238G0548 Erigeron canadensis HOM05D006363 ORTHO05D007920 5.5e-67 258.1 201 67.7
Sopen03g004810 Solanum pennellii HOM05D006363 ORTHO05D007920 5.5e-67 258.1 193 68.4
CANSAT21G0627 Cannabis sativa HOM05D006363 ORTHO05D007920 9.4e-67 257.3 195 68.7
CANSAT21G2254 Cannabis sativa HOM05D006363 ORTHO05D007920 9.4e-67 257.3 195 67.7
PGSC0003DMG400014325 Solanum tuberosum HOM05D006363 ORTHO05D007920 9.4e-67 257.3 193 68.4
HanXRQChr14g0462221 Helianthus annuus HOM05D006363 ORTHO05D007920 2.7e-66 255.8 197 69.0
Nitab4.5_0001508g0030 Nicotiana tabacum HOM05D006363 ORTHO05D007920 1.0e-65 253.8 193 69.4
AUR62021214 Chenopodium quinoa HOM05D006363 ORTHO05D007920 1.8e-65 253.1 196 66.3
CSS0002932 Camellia sinensis var. sinensis HOM05D006363 ORTHO05D007920 3.0e-65 252.3 196 66.8
AUR62016007 Chenopodium quinoa HOM05D006363 ORTHO05D007920 3.0e-65 252.3 194 67.0
CSS0028509 Camellia sinensis var. sinensis HOM05D006363 ORTHO05D007920 3.9e-65 251.9 197 66.5
Dinv28459 Davidia involucrata HOM05D006363 ORTHO05D007920 5.1e-65 251.5 200 64.0
Lj8C25T12 Lonicera japonica HOM05D006363 ORTHO05D007920 6.7e-65 251.1 196 66.8
Aqoxy7G00395 Aquilegia oxysepala HOM05D006363 ORTHO05D007920 1.1e-64 250.4 201 64.7
MSTRG.8448 Avicennia marina HOM05D006363 ORTHO05D007920 1.1e-64 250.4 192 65.6
Lsat_1_v5_gn_2_133820 Lactuca sativa HOM05D006363 ORTHO05D007920 1.1e-64 250.4 197 66.0
EL10Ac3g05667 Beta vulgaris HOM05D006363 ORTHO05D007920 1.5e-64 250.0 194 66.0
Cc03_g13850 Coffea canephora HOM05D006363 ORTHO05D007920 2.0e-64 249.6 196 65.8
unitig_60.g25545 Utricularia gibba HOM05D006363 ORTHO05D007920 3.3e-64 248.8 191 66.5
Eucgr.A02801 Eucalyptus grandis HOM05D006363 ORTHO05D007920 5.7e-64 248.1 202 63.9
PSO782G5704 Papaver somniferum HOM05D006363 ORTHO05D007920 5.7e-64 248.1 215 62.3
Nn6g34197 Nelumbo nucifera HOM05D006363 ORTHO05D007920 4.8e-63 245.0 201 63.2
GSVIVG01010552001 Vitis vinifera HOM05D006363 ORTHO05D007920 1.1e-62 243.8 198 64.6
DCAR_018188 Daucus carota HOM05D006363 ORTHO05D007920 9.1e-62 240.7 194 64.4
CAN.G947.11 Capsicum annuum HOM05D006363 ORTHO05D007920 2.0e-61 239.6 194 66.0
PSO478G1739 Papaver somniferum HOM05D006363 ORTHO05D007920 2.0e-61 239.6 214 59.8
Ah.13g075440 Amaranthus hybridus HOM05D006363 ORTHO05D007920 1.0e-60 237.3 184 66.8
A03p15800 Brassica napus HOM05D006363 ORTHO05D007920 5.2e-57 224.9 143 80.4
MBI04_g04731_MAGBIO Magnolia biondii HOM05D006363 ORTHO05D007920 4.4e-56 221.9 202 57.4
TAR375G0304 Trochodendron aralioides HOM05D006363 ORTHO05D007920 6.3e-55 218.0 179 62.6
ATR0757G111 Amborella trichopoda HOM05D006363 ORTHO05D007920 8.2e-55 217.6 199 58.3
FAN01G1422 Fragaria x ananassa HOM05D006363 ORTHO05D007920 2.6e-53 212.6 193 58.0
CDE04G1845 Ceratophyllum demersum HOM05D006363 ORTHO05D007920 4.5e-53 211.8 182 60.4
Zm00001eb428810 Zea mays HOM05D006363 ORTHO05D007920 1.0e-52 210.7 202 55.9
HPP92_021110 Vanilla planifolia HOM05D006363 ORTHO05D007920 6.5e-52 208.0 176 63.1
Os04g0568600 Oryza sativa ssp. japonica HOM05D006363 ORTHO05D007920 1.0e-49 200.7 194 55.2
SEGI_31787 Sequoiadendron giganteum HOM05D006363 ORTHO05D007920 7.7e-45 184.5 189 52.4
A08p37210 Brassica napus HOM05D006363 ORTHO05D007920 1.3e-44 183.7 133 72.2
SalBow2G2214 Salvia bowleyana HOM05D006363 ORTHO05D007920 2.7e-42 176.0 144 63.9
Sc25g0000440 Simmondsia chinensis HOM05D006363 ORTHO05D007920 7.5e-40 167.9 148 62.8
Pp3c6_24270 Physcomitrium patens HOM05D006363 ORTHO05D007920 1.1e-38 164.1 209 44.5
SMO367G0077 Selaginella moellendorffii HOM05D006363 ORTHO05D007920 2.9e-36 156.0 170 54.7
BcaC01g06168 Brassica carinata HOM05D006363 ORTHO05D007920 6.1e-34 148.3 92 80.4
BcaC06g36545 Brassica carinata HOM05D006363 ORTHO05D007920 2.3e-28 129.8 86 75.6
Mapoly0047s0087 Marchantia polymorpha HOM05D006363 ORTHO05D007920 4.1e-22 109.0 144 43.8
BolC5t32613H Brassica oleracea HOM05D006363 ORTHO05D007920 7.3e-19 98.2 66 75.8
C05p38730 Brassica napus HOM05D006363 ORTHO05D007920 2.8e-18 96.3 66 74.2
Pp3c17_12800 Physcomitrium patens HOM05D006363 ORTHO05D007920 3.6e-18 95.9 145 40.0
TPR.G33086 Trifolium pratense HOM05D006363 ORTHO05D007920 4.9e-15 85.5 59 74.6
TAR633G0106 Trochodendron aralioides HOM05D006363 ORTHO05D007920 4.9e-15 85.5 75 58.7
TAR291G0005 Trochodendron aralioides HOM05D006363 ORTHO05D007920 5.4e-14 82.0 74 59.5
TAR375G0495 Trochodendron aralioides HOM05D006363 ORTHO05D007920 5.4e-14 82.0 74 59.5
TAR624G1193 Trochodendron aralioides HOM05D006363 ORTHO05D007920 5.4e-14 82.0 74 59.5
BcaC01g06167 Brassica carinata HOM05D006363 ORTHO05D007920 7.1e-14 81.6 46 84.8
TAR614G0003 Trochodendron aralioides HOM05D006363 ORTHO05D007920 9.2e-14 81.3 74 59.5
TAR633G1276 Trochodendron aralioides HOM05D006363 ORTHO05D007920 3.5e-13 79.3 74 58.1
TAR629G0450 Trochodendron aralioides HOM05D006363 ORTHO05D007920 4.6e-13 79.0 74 58.1
TAR383G0849 Trochodendron aralioides HOM05D003653 ORTHO05D004249 7.8e-13 78.2 74 56.8
Actinidia03116 Actinidia chinensis HOM05D006363 ORTHO05D007920 1.9e-11 73.6 104 46.2
BcaC05g27871 Brassica carinata HOM05D006363 ORTHO05D007920 4.3e-11 72.4 103 51.5
A01p23910 Brassica napus HOM05D006363 ORTHO05D007920 9.9e-08 61.2 49 63.3
BraA01t02298Z Brassica rapa HOM05D006363 ORTHO05D007920 9.9e-08 61.2 49 63.3


User provided reference genes

Program Settings