Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG3G8240 Aethionema arabicum HOM05D005963 ORTHO05D006869 9.5e-239 829.7 399 100.0
A10p09630 Brassica napus HOM05D005963 ORTHO05D006869 3.7e-158 562.0 398 70.1
BraA10t43044Z Brassica rapa HOM05D005963 ORTHO05D006869 3.7e-158 562.0 398 70.1
Sp6g14050 Schrenkiella parvula HOM05D005963 ORTHO05D006869 3.7e-158 562.0 401 68.6
BolC9t56999H Brassica oleracea HOM05D005963 ORTHO05D006869 6.3e-158 561.2 398 70.1
CARHR264680 Cardamine hirsuta HOM05D005963 ORTHO05D006869 2.0e-156 556.2 403 68.0
Thhalv10015853m.g Eutrema salsugineum HOM05D005963 ORTHO05D006869 4.5e-156 555.1 406 68.2
Carub.0008s1182 Capsella rubella HOM05D005963 ORTHO05D006869 1.3e-155 553.5 406 67.0
AT5G51800 Arabidopsis thaliana HOM05D005963 ORTHO05D006869 3.8e-155 552.0 404 66.6
AL8G26090 Arabidopsis lyrata HOM05D005963 ORTHO05D006869 1.9e-154 549.7 405 67.4
BolC2t08150H Brassica oleracea HOM05D005963 ORTHO05D006869 1.0e-152 543.9 389 67.1
C02p20220 Brassica napus HOM05D005963 ORTHO05D006869 1.1e-151 540.4 398 66.1
BraA02t06276Z Brassica rapa HOM05D005963 ORTHO05D006869 1.5e-151 540.0 398 66.8
A02p12120 Brassica napus HOM05D005963 ORTHO05D006869 4.4e-151 538.5 398 66.6
BcaC04g20635 Brassica carinata HOM05D005963 ORTHO05D006869 1.0e-147 527.3 398 66.8
THA.LOC104825083 Tarenaya hassleriana HOM05D005963 ORTHO05D006869 1.8e-144 516.5 407 63.1
BcaB08g35527 Brassica carinata HOM05D005963 ORTHO05D006869 4.4e-143 511.9 398 64.8
BcaC03g14575 Brassica carinata HOM05D005963 ORTHO05D006869 3.4e-135 485.7 398 61.1
Gohir.A07G040200 Gossypium hirsutum HOM05D005963 ORTHO05D006869 5.0e-131 471.9 406 58.4
Gorai.001G047400 Gossypium raimondii HOM05D005963 ORTHO05D006869 1.1e-130 470.7 406 58.1
CiPaw.03G099400 Carya illinoinensis HOM05D005963 ORTHO05D006869 3.6e-129 465.7 407 56.5
COL.COLO4_14220 Corchorus olitorius HOM05D005963 ORTHO05D006869 6.1e-129 464.9 405 56.8
Duzib205G1443 Durio zibethinus HOM05D005963 ORTHO05D006869 8.0e-129 464.5 406 56.7
Prupe.2G286400 Prunus persica HOM05D005963 ORTHO05D006869 1.8e-128 463.4 405 56.0
Thecc.03G166100 Theobroma cacao HOM05D005963 ORTHO05D006869 1.8e-128 463.4 407 56.8
Gohir.D07G044301 Gossypium hirsutum HOM05D005963 ORTHO05D006869 2.3e-128 463.0 400 58.0
QL12p038851 Quercus lobata HOM05D005963 ORTHO05D006869 2.3e-128 463.0 418 56.2
Manes.06G140900 Manihot esculenta HOM05D005963 ORTHO05D006869 3.0e-128 462.6 410 56.8
GSVIVG01018456001 Vitis vinifera HOM05D005963 ORTHO05D006869 5.2e-128 461.8 407 56.0
Gorai.008G282200 Gossypium raimondii HOM05D005963 ORTHO05D006869 5.7e-127 458.4 391 57.8
Gohir.A12G262600 Gossypium hirsutum HOM05D005963 ORTHO05D006869 1.7e-126 456.8 391 57.0
Gohir.D12G263300 Gossypium hirsutum HOM05D005963 ORTHO05D006869 1.7e-126 456.8 391 57.5
Sabra12G0099600 Salix brachista HOM05D005963 ORTHO05D006869 1.7e-126 456.8 407 56.5
Cpa.g.sc4.183 Carica papaya HOM05D005963 ORTHO05D006869 2.8e-126 456.1 394 57.9
Ciclev10004233m.g Citrus clementina HOM05D005963 ORTHO05D006869 2.8e-126 456.1 401 56.9
CSS0028871 Camellia sinensis var. sinensis HOM05D005963 ORTHO05D006869 3.7e-126 455.7 403 55.8
Dinv35132 Davidia involucrata HOM05D005963 ORTHO05D006869 4.9e-126 455.3 405 55.3
Dinv28513 Davidia involucrata HOM05D005963 ORTHO05D006869 8.3e-126 454.5 392 57.1
Duzib068G1175 Durio zibethinus HOM05D005963 ORTHO05D006869 7.0e-125 451.4 407 55.0
CiPaw.04G064800 Carya illinoinensis HOM05D005963 ORTHO05D006869 1.2e-124 450.7 394 56.1
Potri.012G132300 Populus trichocarpa HOM05D005963 ORTHO05D006869 1.2e-124 450.7 410 55.4
MD01G1192000 Malus domestica HOM05D005963 ORTHO05D006869 1.6e-124 450.3 409 55.3
FAN06G4856 Fragaria x ananassa HOM05D005963 ORTHO05D006869 2.7e-124 449.5 404 55.4
Haze_13797 Corylus avellana HOM05D005963 ORTHO05D006869 1.0e-123 447.6 402 55.7
FAN06G2356 Fragaria x ananassa HOM05D005963 ORTHO05D006869 1.0e-123 447.6 404 55.0
PGR142G0011 Punica granatum HOM05D005963 ORTHO05D006869 1.3e-123 447.2 391 57.0
TWI14G0479 Tripterygium wilfordii HOM05D005963 ORTHO05D006869 1.3e-123 447.2 409 56.2
Lj2g0022710 Lotus japonicus HOM05D005963 ORTHO05D006869 1.7e-123 446.8 406 54.4
FvH4_7g28640 Fragaria vesca HOM05D005963 ORTHO05D006869 3.8e-123 445.7 404 55.4
FAN01G2646 Fragaria x ananassa HOM05D005963 ORTHO05D006869 5.0e-123 445.3 404 55.0
vmacro22547 Vaccinium macrocarpon HOM05D005963 ORTHO05D006869 5.0e-123 445.3 396 55.8
MD00G1003400 Malus domestica HOM05D005963 ORTHO05D006869 1.1e-122 444.1 408 55.4
SHI13839 Sapria himalayana HOM05D005963 ORTHO05D006869 1.1e-122 444.1 407 55.0
DCAR_018136 Daucus carota HOM05D005963 ORTHO05D006869 2.5e-122 443.0 403 53.3
FAN03G0518 Fragaria x ananassa HOM05D005963 ORTHO05D006869 3.3e-122 442.6 404 53.5
Rhsim03G0174100 Rhododendron simsii HOM05D005963 ORTHO05D006869 5.6e-122 441.8 402 55.2
Nn6g34339 Nelumbo nucifera HOM05D005963 ORTHO05D006869 7.2e-122 441.4 397 55.4
Actinidia25056 Actinidia chinensis HOM05D005963 ORTHO05D006869 9.5e-122 441.0 392 56.6
Hma1.2p1_0488F.1_g163860 Hydrangea macrophylla HOM05D005963 ORTHO05D006869 1.6e-121 440.3 396 54.5
Cc02_g03640 Coffea canephora HOM05D005963 ORTHO05D006869 3.6e-121 439.1 400 54.2
RcHm_v2.0_Chr1g0376121 Rosa chinensis HOM05D005963 ORTHO05D006869 4.7e-121 438.7 403 53.8
Solyc03g006900.2 Solanum lycopersicum HOM05D005963 ORTHO05D006869 4.7e-121 438.7 405 54.3
Eucgr.K00183 Eucalyptus grandis HOM05D005963 ORTHO05D006869 1.0e-120 437.6 415 54.5
Sopen03g002900 Solanum pennellii HOM05D005963 ORTHO05D006869 1.8e-120 436.8 405 54.6
Actinidia13537 Actinidia chinensis HOM05D005963 ORTHO05D006869 2.3e-120 436.4 395 54.7
Glyma.09G149700 Glycine max HOM05D005963 ORTHO05D006869 2.3e-120 436.4 398 55.0
Lsat_1_v5_gn_9_53261 Lactuca sativa HOM05D005963 ORTHO05D006869 2.3e-120 436.4 412 54.6
Oeu030146.1 Olea europaea HOM05D005963 ORTHO05D006869 2.3e-120 436.4 396 54.8
MELO3C006856.2 Cucumis melo HOM05D005963 ORTHO05D006869 4.0e-120 435.6 406 53.2
Oeu030148.1 Olea europaea HOM05D005963 ORTHO05D006869 5.2e-120 435.3 396 54.8
Aqoxy7G00515 Aquilegia oxysepala HOM05D005963 ORTHO05D006869 6.8e-120 434.9 402 55.2
Nitab4.5_0000124g0020 Nicotiana tabacum HOM05D005963 ORTHO05D006869 4.4e-119 432.2 406 52.7
PGSC0003DMG400007557 Solanum tuberosum HOM05D005963 ORTHO05D006869 4.4e-119 432.2 408 53.4
Peaxi162Scf00192g00613 Petunia axillaris HOM05D005963 ORTHO05D006869 5.7e-119 431.8 408 53.9
Sed0018627 Sechium edule HOM05D005963 ORTHO05D006869 7.5e-119 431.4 404 54.5
CAN.G1257.1 Capsicum annuum HOM05D005963 ORTHO05D006869 1.7e-118 430.3 408 53.2
HanXRQChr15g0486261 Helianthus annuus HOM05D005963 ORTHO05D006869 1.7e-118 430.3 413 53.5
TAR374G1343 Trochodendron aralioides HOM05D005963 ORTHO05D006869 1.7e-118 430.3 406 54.2
TPR.G26590 Trifolium pratense HOM05D005963 ORTHO05D006869 1.1e-117 427.6 396 53.5
PSO782G2761 Papaver somniferum HOM05D005963 ORTHO05D006869 1.4e-117 427.2 394 54.6
Nitab4.5_0000371g0030 Nicotiana tabacum HOM05D005963 ORTHO05D006869 2.4e-117 426.4 406 52.2
PSO478G0110 Papaver somniferum HOM05D005963 ORTHO05D006869 5.4e-117 425.2 394 54.6
EL10Ac3g05753 Beta vulgaris HOM05D005963 ORTHO05D006869 7.0e-117 424.9 395 53.9
ECA232G0907 Erigeron canadensis HOM05D005963 ORTHO05D006869 9.2e-117 424.5 411 53.5
VMungo0464G1720 Vigna mungo HOM05D005963 ORTHO05D006869 1.6e-116 423.7 396 55.1
CsaV3_3G016590 Cucumis sativus L. HOM05D005963 ORTHO05D006869 5.9e-116 421.8 407 51.6
Phvul.004G124000 Phaseolus vulgaris HOM05D005963 ORTHO05D006869 5.9e-116 421.8 394 54.8
ClCG05G007670 Citrullus lanatus HOM05D005963 ORTHO05D006869 7.8e-116 421.4 408 50.7
arahy.Tifrunner.gnm1.ann1.G2RQNR Arachis hypogaea HOM05D005963 ORTHO05D006869 2.9e-115 419.5 401 53.1
arahy.Tifrunner.gnm1.ann1.R4K09I Arachis hypogaea HOM05D005963 ORTHO05D006869 6.6e-115 418.3 406 52.0
Medtr0007s0220 Medicago truncatula HOM05D005963 ORTHO05D006869 3.3e-114 416.0 405 52.3
HanXRQChr14g0433491 Helianthus annuus HOM05D005963 ORTHO05D006869 1.6e-113 413.7 406 53.2
Psat1g106960 Pisum sativum HOM05D005963 ORTHO05D006869 1.0e-112 411.0 407 52.3
Lalb_Chr19g0131211 Lupinus albus HOM05D005963 ORTHO05D006869 6.8e-112 408.3 397 51.6
Hund04676 Selenicereus undatus HOM05D005963 ORTHO05D006869 6.8e-112 408.3 396 53.0
EL10Ac7g16401 Beta vulgaris HOM05D005963 ORTHO05D006869 3.7e-110 402.5 395 50.9
Sc25g0000220 Simmondsia chinensis HOM05D005963 ORTHO05D006869 1.4e-109 400.6 400 51.0
AUR62016071 Chenopodium quinoa HOM05D005963 ORTHO05D006869 1.9e-109 400.2 396 50.5
FAN10G3242 Fragaria x ananassa HOM05D005963 ORTHO05D006869 2.7e-108 396.4 404 50.7
CDE08G0260 Ceratophyllum demersum HOM05D005963 ORTHO05D006869 3.5e-108 396.0 384 50.8
AUR62021279 Chenopodium quinoa HOM05D005963 ORTHO05D006869 4.6e-108 395.6 397 50.6
Ah.13g067680 Amaranthus hybridus HOM05D005963 ORTHO05D006869 4.3e-106 389.0 409 47.9
SEGI_31852 Sequoiadendron giganteum HOM05D005963 ORTHO05D006869 1.2e-105 387.5 390 49.7
ATR0661G117 Amborella trichopoda HOM05D005963 ORTHO05D006869 4.0e-104 382.5 392 50.5
Lj8C34G2 Lonicera japonica HOM05D005963 ORTHO05D006869 6.6e-99 365.2 360 52.8
FAN03G0902 Fragaria x ananassa HOM05D005963 ORTHO05D006869 5.6e-90 335.5 336 50.6
Atru.chr1.580 Acer truncatum HOM05D005963 ORTHO05D006869 6.7e-67 258.8 255 51.8
PGSC0003DMG400007558 Solanum tuberosum HOM05D005963 ORTHO05D006869 2.0e-47 194.1 316 37.7
MBI05_g12587_MAGBIO Magnolia biondii HOM05D005963 ORTHO05D006869 9.4e-45 185.3 161 53.4
Pp3c2_90 Physcomitrium patens HOM05D005963 ORTHO05D006869 6.1e-44 182.6 379 33.5
Pp3c26_6160 Physcomitrium patens HOM05D005963 ORTHO05D006869 3.9e-43 179.9 379 33.5
Pp3c26_6250 Physcomitrium patens HOM05D005963 ORTHO05D006869 3.9e-43 179.9 379 33.5
Pp3c18_1570 Physcomitrium patens HOM05D005963 ORTHO05D006869 6.7e-43 179.1 379 33.2
Ca_05417_v3 Cicer arietinum L. HOM05D005963 ORTHO05D006869 4.7e-36 156.4 144 55.6
MBI05_g12586_MAGBIO Magnolia biondii HOM05D005963 ORTHO05D006869 6.1e-36 156.0 196 45.9
SMO174G0009 Selaginella moellendorffii HOM05D005963 ORTHO05D006869 1.2e-31 141.7 393 28.0
SMO276G0013 Selaginella moellendorffii HOM05D005963 ORTHO05D006869 7.2e-29 132.5 311 29.9
Ca_30119_v3 Cicer arietinum L. HOM05D005963 ORTHO05D006869 4.4e-26 123.2 129 51.2
C09p41240 Brassica napus HOM05D005963 ORTHO05D006869 5.7e-26 122.9 96 66.7
SMO358G0565 Selaginella moellendorffii HOM05D001046 ORTHO05D007174 7.5e-26 122.5 396 27.0
SMO116G0123 Selaginella moellendorffii HOM05D005963 ORTHO05D006869 2.2e-17 94.4 323 25.7
SMO195G0003 Selaginella moellendorffii HOM05D005963 ORTHO05D006869 2.8e-17 94.0 319 26.0
SMO268G0015 Selaginella moellendorffii HOM05D005963 ORTHO05D006869 3.5e-15 87.0 374 24.3
Cre02.g095117 Chlamydomonas reinhardtii HOM05D010267 ORTHO05D010759 9.8e-10 68.9 357 24.1


User provided reference genes

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