Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG3G8110 Aethionema arabicum HOM05D007548 ORTHO05D009527 8.6e-202 706.8 371 100.0
AL8G25930 Arabidopsis lyrata HOM05D007548 ORTHO05D009527 2.8e-104 382.9 367 65.7
CARHR264530 Cardamine hirsuta HOM05D007548 ORTHO05D009527 3.3e-100 369.4 363 63.9
AT5G51680 Arabidopsis thaliana HOM05D007548 ORTHO05D009527 2.2e-96 356.7 363 64.2
Thhalv10014011m.g Eutrema salsugineum HOM05D007548 ORTHO05D009527 2.5e-92 343.2 364 61.5
Carub.0008s1170 Capsella rubella HOM05D007548 ORTHO05D009527 3.3e-92 342.8 363 60.9
Sp6g13900 Schrenkiella parvula HOM05D007548 ORTHO05D009527 6.6e-85 318.5 409 54.3
A10p09560 Brassica napus HOM05D007548 ORTHO05D009527 6.4e-72 275.4 365 54.5
BcaC04g20644 Brassica carinata HOM05D007548 ORTHO05D009527 3.5e-70 269.6 365 53.4
C09p41110 Brassica napus HOM05D007548 ORTHO05D009527 3.5e-70 269.6 365 53.4
BolC9t56989H Brassica oleracea HOM05D007548 ORTHO05D009527 3.5e-70 269.6 365 53.4
BcaB08g35518 Brassica carinata HOM05D007548 ORTHO05D009527 2.3e-69 266.9 367 54.2
BraA10t43031Z Brassica rapa HOM05D007548 ORTHO05D009527 1.2e-67 261.2 364 52.5
THA.LOC104798720 Tarenaya hassleriana HOM05D007548 ORTHO05D009527 3.6e-67 259.6 387 46.0
Duzib068G0425 Durio zibethinus HOM05D007548 ORTHO05D009527 1.6e-46 191.0 368 40.5
Thecc.03G162900 Theobroma cacao HOM05D007548 ORTHO05D009527 1.3e-43 181.4 371 40.2
A02p12160 Brassica napus HOM05D007548 ORTHO05D009527 4.0e-42 176.4 415 37.6
Gohir.D12G264100 Gossypium hirsutum HOM05D007548 ORTHO05D009527 1.3e-40 171.4 368 34.8
Haze_13820 Corylus avellana HOM05D007548 ORTHO05D009527 1.9e-39 167.5 358 41.1
BolC2t08158H Brassica oleracea HOM05D007548 ORTHO05D009527 2.5e-39 167.2 416 36.8
BcaB05g23992 Brassica carinata HOM05D007548 ORTHO05D009527 3.2e-39 166.8 376 39.9
FvH4_7g28270 Fragaria vesca HOM05D007548 ORTHO05D009527 3.5e-38 163.3 360 34.2
FAN06G3028 Fragaria x ananassa HOM05D007548 ORTHO05D009527 3.5e-38 163.3 360 34.2
FAN06G3476 Fragaria x ananassa HOM05D007548 ORTHO05D009527 3.5e-38 163.3 360 34.2
BraA02t06280Z Brassica rapa HOM05D007548 ORTHO05D009527 1.8e-37 161.0 414 35.3
FAN03G1824 Fragaria x ananassa HOM05D007548 ORTHO05D009527 2.3e-37 160.6 360 33.3
CiPaw.03G097400 Carya illinoinensis HOM05D007548 ORTHO05D009527 6.7e-37 159.1 342 40.4
Potri.015G132000 Populus trichocarpa HOM05D007548 ORTHO05D009527 1.6e-35 154.5 372 34.4
Cfa008236 Carpinus fangiana HOM05D007548 ORTHO05D009527 8.2e-35 152.1 358 36.3
Gohir.A12G263800 Gossypium hirsutum HOM05D007548 ORTHO05D009527 1.8e-34 151.0 368 36.4
BcaC03g14581 Brassica carinata HOM05D007548 ORTHO05D009527 1.2e-33 148.3 465 32.9
TWI39G0023 Tripterygium wilfordii HOM05D007548 ORTHO05D009527 4.5e-33 146.4 384 38.5
Gorai.008G283300 Gossypium raimondii HOM05D007548 ORTHO05D009527 1.0e-32 145.2 368 36.4
Prupe.2G283000 Prunus persica HOM05D007548 ORTHO05D009527 1.7e-32 144.4 374 35.8
Atru.chr1.619 Acer truncatum HOM05D007548 ORTHO05D009527 2.2e-32 144.1 329 39.8
FAN01G2764 Fragaria x ananassa HOM05D007548 ORTHO05D009527 2.9e-32 143.7 368 32.1
FAN03G2953 Fragaria x ananassa HOM05D007548 ORTHO05D009527 2.9e-32 143.7 336 33.0
RcHm_v2.0_Chr1g0375221 Rosa chinensis HOM05D007548 ORTHO05D009527 6.5e-32 142.5 335 32.8
Ciclev10007148m.g Citrus clementina HOM05D007548 ORTHO05D009527 1.1e-31 141.7 318 39.3
Manes.06G138600 Manihot esculenta HOM05D007548 ORTHO05D009527 4.2e-31 139.8 371 36.1
PGR142G1046 Punica granatum HOM05D007548 ORTHO05D009527 2.1e-30 137.5 387 34.9
Oeu021734.1 Olea europaea HOM05D007548 ORTHO05D009527 1.0e-29 135.2 373 37.3
DCAR_018129 Daucus carota HOM05D007548 ORTHO05D009527 3.9e-29 133.3 360 37.5
Oeu021733.1 Olea europaea HOM05D007548 ORTHO05D009527 1.1e-28 131.7 373 37.0
Eucgr.K00142 Eucalyptus grandis HOM05D007548 ORTHO05D009527 1.6e-27 127.9 322 35.7
Cpa.g.sc13.212 Carica papaya HOM05D007548 ORTHO05D009527 6.3e-27 125.9 359 32.6
MSTRG.27166 Avicennia marina HOM05D007548 ORTHO05D009527 1.4e-26 124.8 365 37.0
TAR636G2044 Trochodendron aralioides HOM05D007548 ORTHO05D009527 4.5e-25 119.8 364 31.0
SalBow4G1498 Salvia bowleyana HOM05D007548 ORTHO05D009527 5.9e-25 119.4 369 37.1
Glyma.10G242400 Glycine max HOM05D007548 ORTHO05D009527 1.7e-24 117.9 357 35.0
Cc02_g03840 Coffea canephora HOM05D007548 ORTHO05D009527 3.8e-24 116.7 343 36.2
Peaxi162Scf00192g00096 Petunia axillaris HOM05D007548 ORTHO05D009527 6.5e-24 115.9 351 35.3
COL.COLO4_14190 Corchorus olitorius HOM05D007548 ORTHO05D009527 1.1e-23 115.2 267 39.3
Lj8A35G80 Lonicera japonica HOM05D007548 ORTHO05D009527 1.4e-23 114.8 334 36.2
Nn4g26440 Nelumbo nucifera HOM05D007548 ORTHO05D009527 1.9e-23 114.4 336 33.3
Glyma.20G151700 Glycine max HOM05D007548 ORTHO05D009527 7.9e-22 109.0 356 34.6
Lj5g0018367 Lotus japonicus HOM05D007548 ORTHO05D009527 1.4e-21 108.2 364 35.2
Solyc03g007080.4 Solanum lycopersicum HOM05D007548 ORTHO05D009527 1.4e-21 108.2 269 36.8
Actinidia13550 Actinidia chinensis HOM05D007548 ORTHO05D009527 5.1e-21 106.3 357 32.2
Medtr1g102510 Medicago truncatula HOM05D007548 ORTHO05D009527 1.1e-20 105.1 270 35.2
Actinidia25043 Actinidia chinensis HOM05D007548 ORTHO05D009527 7.4e-20 102.4 355 32.4
Nitab4.5_0008495g0030 Nicotiana tabacum HOM05D007548 ORTHO05D009527 7.4e-20 102.4 377 33.7
CANSAT80G1542 Cannabis sativa HOM05D007548 ORTHO05D009527 1.7e-19 101.3 331 36.3
Nitab4.5_0000072g0300 Nicotiana tabacum HOM05D007548 ORTHO05D009527 8.2e-19 99.0 367 33.8
Nn1g01184 Nelumbo nucifera HOM05D007548 ORTHO05D009527 1.1e-18 98.6 316 34.5
Manes.14G032600 Manihot esculenta HOM05D007548 ORTHO05D009527 1.8e-18 97.8 341 32.8
SalBow4G2379 Salvia bowleyana HOM05D007548 ORTHO05D009527 5.3e-18 96.3 328 31.1
Sopen03g003070 Solanum pennellii HOM05D007548 ORTHO05D009527 2.0e-17 94.4 378 34.7
Migut.F00422 Erythranthe guttata HOM05D007548 ORTHO05D009527 5.0e-16 89.7 346 34.4
EL10Ac3g05788 Beta vulgaris HOM05D007548 ORTHO05D009527 6.5e-16 89.4 332 32.8
Ah.07g208330 Amaranthus hybridus HOM05D007548 ORTHO05D009527 1.4e-15 88.2 331 32.3
AUR62035044 Chenopodium quinoa HOM05D007548 ORTHO05D009527 1.6e-14 84.7 349 31.2
arahy.Tifrunner.gnm1.ann1.WA56KQ Arachis hypogaea HOM05D001870 ORTHO05D001797 2.1e-14 84.3 361 26.0
Psat6g202320 Pisum sativum HOM05D007548 ORTHO05D009527 2.1e-14 84.3 253 32.0
Rhsim03G0172300 Rhododendron simsii HOM05D007548 ORTHO05D009527 2.7e-14 84.0 368 32.6
GSVIVG01018495001 Vitis vinifera HOM05D007548 ORTHO05D009527 2.7e-14 84.0 173 38.2
VMungo0720G2396 Vigna mungo HOM05D007548 ORTHO05D009527 3.6e-14 83.6 321 33.6
AUR62016096 Chenopodium quinoa HOM05D007548 ORTHO05D009527 6.1e-14 82.8 332 32.2
HanXRQChr05g0141371 Helianthus annuus HOM05D007548 ORTHO05D009527 1.4e-13 81.6 271 29.2
Phvul.007G063100 Phaseolus vulgaris HOM05D007548 ORTHO05D009527 5.2e-13 79.7 360 31.1
PGSC0003DMG400031012 Solanum tuberosum HOM05D007548 ORTHO05D009527 6.7e-13 79.3 373 30.6
Sc25g0000160 Simmondsia chinensis HOM05D007548 ORTHO05D009527 1.1e-12 78.6 357 27.2
arahy.Tifrunner.gnm1.ann1.J4U887 Arachis hypogaea HOM05D001870 ORTHO05D001797 2.0e-12 77.8 359 25.9
TPR.G26079 Trifolium pratense HOM05D007548 ORTHO05D009527 3.3e-12 77.0 149 40.3
Lsat_1_v5_gn_8_8041 Lactuca sativa HOM05D007548 ORTHO05D009527 7.4e-12 75.9 145 35.2
Lalb_Chr21g0304861 Lupinus albus HOM05D007548 ORTHO05D009527 9.7e-12 75.5 356 28.9
arahy.Tifrunner.gnm1.ann1.Z61DE3 Arachis hypogaea HOM05D007548 ORTHO05D009527 1.3e-11 75.1 261 28.7
arahy.Tifrunner.gnm1.ann1.1QTB59 Arachis hypogaea HOM05D007548 ORTHO05D009527 2.2e-11 74.3 267 28.1
Dinv07997 Davidia involucrata HOM05D007548 ORTHO05D009527 3.1e-10 70.5 254 33.1
PSO782G0883 Papaver somniferum HOM05D007548 ORTHO05D009527 4.1e-10 70.1 338 31.7
Aqoxy7G00579 Aquilegia oxysepala HOM05D007548 ORTHO05D009527 4.5e-09 66.6 325 30.8
ECA233G0652 Erigeron canadensis HOM05D007548 ORTHO05D009527 2.9e-08 63.9 359 29.0
FAN10G1395 Fragaria x ananassa HOM05D007548 ORTHO05D009527 6.5e-08 62.8 254 24.8


User provided reference genes

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