Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG3G800 Aethionema arabicum HOM05D007488 ORTHO05D009461 1.3e-39 166.0 87 100.0
AL4G39170 Arabidopsis lyrata HOM05D007488 ORTHO05D009461 1.2e-34 149.4 83 90.4
AT2G41200 Arabidopsis thaliana HOM05D007488 ORTHO05D009461 3.6e-34 147.9 83 88.0
BcaB01g03485 Brassica carinata HOM05D007488 ORTHO05D009461 4.7e-34 147.5 85 85.9
Thhalv10017345m.g Eutrema salsugineum HOM05D007488 ORTHO05D009461 4.7e-34 147.5 85 85.9
CARHR136300 Cardamine hirsuta HOM05D007488 ORTHO05D009461 6.2e-34 147.1 85 85.9
Sp4g23500 Schrenkiella parvula HOM05D007488 ORTHO05D009461 1.8e-33 145.6 85 85.9
BcaC01g05355 Brassica carinata HOM05D007488 ORTHO05D009461 3.1e-33 144.8 85 84.7
A03p23120 Brassica napus HOM05D007488 ORTHO05D009461 3.1e-33 144.8 85 84.7
C03p27550 Brassica napus HOM05D007488 ORTHO05D009461 3.1e-33 144.8 85 84.7
BolC3t15128H Brassica oleracea HOM05D007488 ORTHO05D009461 3.1e-33 144.8 85 84.7
BraA03t11533Z Brassica rapa HOM05D007488 ORTHO05D009461 3.1e-33 144.8 85 84.7
THA.LOC104803261 Tarenaya hassleriana HOM05D007488 ORTHO05D009461 6.8e-33 143.7 85 82.4
Carub.0004s2351 Capsella rubella HOM05D007488 ORTHO05D009461 3.4e-32 141.4 83 83.1
BolC4t21895H Brassica oleracea HOM05D007488 ORTHO05D009461 2.7e-29 131.7 87 77.0
C04p02520 Brassica napus HOM05D007488 ORTHO05D009461 4.6e-29 131.0 79 83.5
BcaC02g12760 Brassica carinata HOM05D007488 ORTHO05D009461 1.7e-28 129.0 83 77.1
Manes.09G005400 Manihot esculenta HOM05D007488 ORTHO05D009461 5.2e-25 117.5 85 69.4
Cpa.g.sc5.171 Carica papaya HOM05D007488 ORTHO05D009461 6.8e-25 117.1 80 68.8
Prupe.7G038600 Prunus persica HOM05D007488 ORTHO05D009461 6.8e-25 117.1 87 62.1
EL10Ac3g07236 Beta vulgaris HOM05D007488 ORTHO05D009461 2.4e-22 108.6 84 60.7
SalBow1G5076 Salvia bowleyana HOM05D007488 ORTHO05D009461 3.2e-22 108.2 84 57.1
SalBow1G6194 Salvia bowleyana HOM05D007488 ORTHO05D009461 3.2e-22 108.2 84 57.1
Ciclev10006109m.g Citrus clementina HOM05D007488 ORTHO05D009461 7.1e-22 107.1 85 56.5
Lsat_1_v5_gn_5_157940 Lactuca sativa HOM05D007488 ORTHO05D009461 9.2e-22 106.7 84 58.3
MD14G1087900 Malus domestica HOM05D007488 ORTHO05D009461 1.2e-21 106.3 85 61.2
Potri.006G038600 Populus trichocarpa HOM05D007488 ORTHO05D009461 1.2e-21 106.3 84 58.3
TWI74G0203 Tripterygium wilfordii HOM05D007488 ORTHO05D009461 2.7e-21 105.1 83 57.8
Lj1P1093T64 Lonicera japonica HOM05D007488 ORTHO05D009461 3.5e-21 104.8 85 54.1
MSTRG.19810 Avicennia marina HOM05D007488 ORTHO05D009461 4.6e-21 104.4 84 59.5
PGR142G4416 Punica granatum HOM05D007488 ORTHO05D009461 4.6e-21 104.4 85 57.6
Rhsim03G0039700 Rhododendron simsii HOM05D007488 ORTHO05D009461 1.0e-20 103.2 85 57.6
Cfa003623 Carpinus fangiana HOM05D007488 ORTHO05D009461 1.7e-20 102.4 83 60.2
Cc06_g19180 Coffea canephora HOM05D007488 ORTHO05D009461 1.7e-20 102.4 84 58.3
Haze_15889 Corylus avellana HOM05D007488 ORTHO05D009461 1.7e-20 102.4 83 59.0
Migut.K00133 Erythranthe guttata HOM05D007488 ORTHO05D009461 3.0e-20 101.7 85 58.8
Eucgr.A02247 Eucalyptus grandis HOM05D007488 ORTHO05D009461 3.9e-20 101.3 83 56.6
ECA248G2641 Erigeron canadensis HOM05D007488 ORTHO05D009461 5.1e-20 100.9 84 58.3
HanXRQChr03g0061531 Helianthus annuus HOM05D007488 ORTHO05D009461 8.6e-20 100.1 84 54.8
Sc18g0003830 Simmondsia chinensis HOM05D007488 ORTHO05D009461 1.1e-19 99.8 84 53.6
A05p02110 Brassica napus HOM05D007488 ORTHO05D009461 1.5e-19 99.4 84 65.5
BraA05t19207Z Brassica rapa HOM05D007488 ORTHO05D009461 1.5e-19 99.4 84 65.5
DCAR_016880 Daucus carota HOM05D007488 ORTHO05D009461 1.5e-19 99.4 79 63.3
Actinidia01825 Actinidia chinensis HOM05D007488 ORTHO05D009461 1.9e-19 99.0 84 56.0
Nn4g25823 Nelumbo nucifera HOM05D007488 ORTHO05D009461 2.5e-19 98.6 86 59.3
QL07p010346 Quercus lobata HOM05D007488 ORTHO05D009461 3.3e-19 98.2 84 53.6
Ah.04g150940 Amaranthus hybridus HOM05D007488 ORTHO05D009461 5.6e-19 97.4 84 56.0
Duzib106G1788 Durio zibethinus HOM05D007488 ORTHO05D009461 1.6e-18 95.9 84 63.1
Oeu063781.2 Olea europaea HOM05D004518 ORTHO05D005434 1.6e-18 95.9 85 56.5
Hund19096 Selenicereus undatus HOM05D007488 ORTHO05D009461 2.1e-18 95.5 85 54.1
Medtr7g089940 Medicago truncatula HOM05D007488 ORTHO05D009461 4.7e-18 94.4 83 54.2
AUR62030320 Chenopodium quinoa HOM05D007488 ORTHO05D009461 8.1e-18 93.6 85 51.8
Peaxi162Scf00076g00524 Petunia axillaris HOM05D007488 ORTHO05D009461 8.1e-18 93.6 85 50.6
Ca_08393_v3 Cicer arietinum L. HOM05D007488 ORTHO05D009461 1.1e-17 93.2 85 54.1
Psat3g078680 Pisum sativum HOM05D007488 ORTHO05D009461 1.4e-17 92.8 83 55.4
Gohir.A11G307200 Gossypium hirsutum HOM05D007488 ORTHO05D009461 3.1e-17 91.7 79 64.6
CANSAT64G0776 Cannabis sativa HOM05D007488 ORTHO05D009461 4.0e-17 91.3 81 56.8
Thecc.05G135000 Theobroma cacao HOM05D007488 ORTHO05D009461 4.0e-17 91.3 84 61.9
Atru.chr1.1442 Acer truncatum HOM05D007488 ORTHO05D009461 5.2e-17 90.9 84 52.4
Gohir.D11G322700 Gossypium hirsutum HOM05D007488 ORTHO05D009461 8.9e-17 90.1 79 64.6
Peaxi162Scf00701g00057 Petunia axillaris HOM05D007488 ORTHO05D009461 8.9e-17 90.1 80 51.2
CiPaw.09G047600 Carya illinoinensis HOM05D007488 ORTHO05D009461 1.5e-16 89.4 83 54.2
FAN05G4359 Fragaria x ananassa HOM05D007488 ORTHO05D009461 1.5e-16 89.4 85 55.3
FAN14G1565 Fragaria x ananassa HOM05D007488 ORTHO05D009461 1.5e-16 89.4 83 56.6
Dinv09710 Davidia involucrata HOM05D007488 ORTHO05D009461 2.0e-16 89.0 85 50.6
FAN02G3897 Fragaria x ananassa HOM05D007488 ORTHO05D009461 2.0e-16 89.0 85 55.3
Nitab4.5_0001937g0020 Nicotiana tabacum HOM05D007488 ORTHO05D009461 2.0e-16 89.0 85 52.9
Aqoxy2G00394 Aquilegia oxysepala HOM05D007488 ORTHO05D009461 2.6e-16 88.6 86 52.3
AUR62018346 Chenopodium quinoa HOM05D007488 ORTHO05D009461 3.4e-16 88.2 77 53.2
FvH4_6g45840 Fragaria vesca HOM05D007488 ORTHO05D009461 4.4e-16 87.8 83 55.4
Gorai.007G352800 Gossypium raimondii HOM05D007488 ORTHO05D009461 4.4e-16 87.8 79 62.0
Lj1g0022068 Lotus japonicus HOM05D007488 ORTHO05D009461 4.4e-16 87.8 85 50.6
TPR.G30624 Trifolium pratense HOM05D007488 ORTHO05D009461 5.8e-16 87.4 85 50.6
PSO339G1058 Papaver somniferum HOM05D007488 ORTHO05D009461 7.6e-16 87.0 76 52.6
CAN.G317.6 Capsicum annuum HOM05D007488 ORTHO05D009461 9.9e-16 86.7 78 51.3
Nitab4.5_0000424g0040 Nicotiana tabacum HOM05D007488 ORTHO05D009461 1.7e-15 85.9 77 53.2
Nitab4.5_0000812g0120 Nicotiana tabacum HOM05D007488 ORTHO05D009461 3.8e-15 84.7 86 48.8
Sopen03g012080 Solanum pennellii HOM05D007488 ORTHO05D009461 8.4e-15 83.6 87 46.0
PSO384G4473 Papaver somniferum HOM05D007488 ORTHO05D009461 1.1e-14 83.2 86 47.7
TAR369G0408 Trochodendron aralioides HOM05D007488 ORTHO05D009461 1.4e-14 82.8 75 57.3
SGA_v2.0_scaffold94G28540 Striga asiatica HOM05D007488 ORTHO05D009461 1.9e-14 82.4 75 54.7
Glyma.19G130600 Glycine max HOM05D007488 ORTHO05D009461 2.4e-14 82.0 77 51.9
Lalb_Chr22g0357421 Lupinus albus HOM05D007488 ORTHO05D009461 2.4e-14 82.0 77 57.1
Phvul.001G123700 Phaseolus vulgaris HOM05D007488 ORTHO05D009461 4.2e-14 81.3 85 47.1
RcHm_v2.0_Chr2g0164041 Rosa chinensis HOM05D007488 ORTHO05D009461 5.4e-14 80.9 86 50.0
VMungo1383G0792 Vigna mungo HOM05D007488 ORTHO05D009461 5.4e-14 80.9 86 45.3
Nitab4.5_0006279g0050 Nicotiana tabacum HOM05D007488 ORTHO05D009461 9.2e-14 80.1 86 47.7
Glyma.03G128000 Glycine max HOM05D007488 ORTHO05D009461 2.7e-13 78.6 77 50.6
arahy.Tifrunner.gnm1.ann1.8RZU3Q Arachis hypogaea HOM05D007488 ORTHO05D009461 1.9e-11 72.4 90 44.4
Solyc03g058440.1 Solanum lycopersicum HOM05D007488 ORTHO05D009461 2.5e-11 72.0 67 52.2
arahy.Tifrunner.gnm1.ann1.Z4B7ZU Arachis hypogaea HOM05D007488 ORTHO05D009461 5.6e-11 70.9 90 45.6
Sopen10g029120 Solanum pennellii HOM05D000484 ORTHO05D000346 6.2e-10 67.4 73 49.3
GSVIVG01033626001 Vitis vinifera HOM05D007488 ORTHO05D009461 2.6e-08 62.0 75 41.3
CDE09G0800 Ceratophyllum demersum HOM05D007488 ORTHO05D009461 8.4e-07 57.0 75 37.3


User provided reference genes

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