Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG3G7960 Aethionema arabicum HOM05D007220 ORTHO05D009058 2.6e-79 298.9 180 100.0
Sp6g13740 Schrenkiella parvula HOM05D007220 ORTHO05D009058 1.4e-61 240.0 181 78.5
BcaB01g04168 Brassica carinata HOM05D007220 ORTHO05D009058 1.4e-59 233.4 180 75.0
BcaC01g06128 Brassica carinata HOM05D007220 ORTHO05D009058 3.9e-59 231.9 180 67.2
C03p18980 Brassica napus HOM05D007220 ORTHO05D009058 3.9e-59 231.9 180 67.2
BolC3t14287H Brassica oleracea HOM05D007220 ORTHO05D009058 3.9e-59 231.9 180 67.2
AL8G25850 Arabidopsis lyrata HOM05D007220 ORTHO05D009058 1.7e-57 226.5 189 65.1
BraA03t10902Z Brassica rapa HOM05D007220 ORTHO05D009058 4.8e-57 224.9 181 65.7
AT5G51545 Arabidopsis thaliana HOM05D007220 ORTHO05D009058 1.4e-56 223.4 188 66.0
Carub.0008s1158 Capsella rubella HOM05D007220 ORTHO05D009058 4.5e-55 218.4 183 64.5
A03p16110 Brassica napus HOM05D007220 ORTHO05D009058 7.7e-55 217.6 180 74.4
CARHR264320 Cardamine hirsuta HOM05D007220 ORTHO05D009058 3.6e-52 208.8 189 63.0
THA.LOC104811513 Tarenaya hassleriana HOM05D007220 ORTHO05D009058 1.7e-49 199.9 176 62.5
Cpa.g.sc3.292 Carica papaya HOM05D007220 ORTHO05D009058 2.4e-40 169.5 193 61.1
COL.COLO4_14153 Corchorus olitorius HOM05D007220 ORTHO05D009058 8.5e-38 161.0 191 60.2
Duzib205G1715 Durio zibethinus HOM05D007220 ORTHO05D009058 7.2e-37 157.9 195 49.2
Gohir.D07G043100 Gossypium hirsutum HOM05D007220 ORTHO05D009058 1.6e-36 156.8 104 72.1
ClCG05G007450 Citrullus lanatus HOM05D007220 ORTHO05D009058 2.7e-36 156.0 198 51.0
Gohir.A07G038900 Gossypium hirsutum HOM05D007220 ORTHO05D009058 2.7e-36 156.0 104 72.1
Gorai.001G046100 Gossypium raimondii HOM05D007220 ORTHO05D009058 2.7e-36 156.0 104 72.1
Manes.14G034000 Manihot esculenta HOM05D007220 ORTHO05D009058 3.6e-36 155.6 199 47.2
Thecc.03G158900 Theobroma cacao HOM05D007220 ORTHO05D009058 3.6e-36 155.6 194 53.6
MELO3C006826.2 Cucumis melo HOM05D007220 ORTHO05D009058 6.1e-36 154.8 198 49.0
CsaV3_3G016270 Cucumis sativus L. HOM05D007220 ORTHO05D009058 8.0e-36 154.5 193 49.7
Nn4g26358 Nelumbo nucifera HOM05D007220 ORTHO05D009058 3.0e-35 152.5 97 75.3
TWI39G1186 Tripterygium wilfordii HOM05D007220 ORTHO05D009058 4.0e-35 152.1 192 48.4
Sabra15G0142900 Salix brachista HOM05D007220 ORTHO05D009058 1.5e-34 150.2 104 68.3
Eucgr.A02878 Eucalyptus grandis HOM05D007220 ORTHO05D009058 2.0e-34 149.8 197 51.3
PGR042G1708 Punica granatum HOM05D007220 ORTHO05D009058 2.0e-34 149.8 101 71.3
Dinv22967 Davidia involucrata HOM05D007220 ORTHO05D009058 7.5e-34 147.9 104 67.3
MD01G1184500 Malus domestica HOM05D007220 ORTHO05D009058 7.5e-34 147.9 182 50.5
Potri.015G129600 Populus trichocarpa HOM05D007220 ORTHO05D009058 1.3e-33 147.1 192 58.3
QL09p019051 Quercus lobata HOM05D007220 ORTHO05D009058 1.3e-33 147.1 104 70.2
Dinv28549 Davidia involucrata HOM05D007220 ORTHO05D009058 1.7e-33 146.7 173 48.6
Glyma.09G232600 Glycine max HOM05D007220 ORTHO05D009058 2.8e-33 146.0 146 50.7
GSVIVG01018558001 Vitis vinifera HOM05D007220 ORTHO05D009058 2.8e-33 146.0 164 47.6
CiPaw.04G061800 Carya illinoinensis HOM05D007220 ORTHO05D009058 4.8e-33 145.2 203 55.7
Cfa008220 Carpinus fangiana HOM05D007220 ORTHO05D009058 6.3e-33 144.8 189 48.1
vmacro09892 Vaccinium macrocarpon HOM05D007220 ORTHO05D009058 6.3e-33 144.8 105 70.5
Actinidia25024 Actinidia chinensis HOM05D007220 ORTHO05D009058 8.3e-33 144.4 189 54.0
FAN03G0488 Fragaria x ananassa HOM05D007220 ORTHO05D009058 8.3e-33 144.4 163 48.5
FAN03G2818 Fragaria x ananassa HOM05D007220 ORTHO05D009058 8.3e-33 144.4 163 48.5
Atru.chr1.664 Acer truncatum HOM05D007220 ORTHO05D009058 1.4e-32 143.7 101 66.3
arahy.Tifrunner.gnm1.ann1.0IXC5E Arachis hypogaea HOM05D007220 ORTHO05D009058 1.4e-32 143.7 104 65.4
Ciclev10005924m.g Citrus clementina HOM05D007220 ORTHO05D009058 5.4e-32 141.7 104 65.4
FAN10G3220 Fragaria x ananassa HOM05D007220 ORTHO05D009058 7.0e-32 141.4 163 52.8
SGA_v2.0_scaffold2G01175 Striga asiatica HOM05D007220 ORTHO05D009058 7.0e-32 141.4 189 54.5
Cc02_g04040 Coffea canephora HOM05D007220 ORTHO05D009058 9.1e-32 141.0 104 64.4
FAN06G0674 Fragaria x ananassa HOM05D007220 ORTHO05D009058 2.0e-31 139.8 163 52.8
FAN01G2832 Fragaria x ananassa HOM05D007220 ORTHO05D009058 2.7e-31 139.4 163 52.1
FAN06G4318 Fragaria x ananassa HOM05D007220 ORTHO05D009058 2.7e-31 139.4 166 49.4
Haze_13838 Corylus avellana HOM05D007220 ORTHO05D009058 3.5e-31 139.0 189 47.1
FvH4_7g27960 Fragaria vesca HOM05D007220 ORTHO05D009058 3.5e-31 139.0 166 50.0
Rhsim09G0192800 Rhododendron simsii HOM05D007220 ORTHO05D009058 4.5e-31 138.7 105 68.6
RcHm_v2.0_Chr1g0374911 Rosa chinensis HOM05D007220 ORTHO05D009058 4.5e-31 138.7 164 47.0
VMungo1127G0384 Vigna mungo HOM05D007220 ORTHO05D009058 5.9e-31 138.3 172 56.4
CSS0026352 Camellia sinensis var. sinensis HOM05D007220 ORTHO05D009058 1.3e-30 137.1 107 66.4
Phvul.011G004500 Phaseolus vulgaris HOM05D007220 ORTHO05D009058 3.8e-30 135.6 104 65.4
SGA_v2.0_scaffold486G52391 Striga asiatica HOM05D007220 ORTHO05D009058 3.8e-30 135.6 187 44.9
MSTRG.27183 Avicennia marina HOM05D007220 ORTHO05D009058 8.6e-30 134.4 190 52.6
Aqoxy7G00673 Aquilegia oxysepala HOM05D007220 ORTHO05D009058 3.2e-29 132.5 96 66.7
AUR62016183 Chenopodium quinoa HOM05D007220 ORTHO05D009058 3.2e-29 132.5 194 41.2
Sc19g0001910 Simmondsia chinensis HOM05D007220 ORTHO05D009058 4.2e-29 132.1 104 62.5
CAN.G152.17 Capsicum annuum HOM05D007220 ORTHO05D009058 1.2e-28 130.6 107 62.6
Ca_30916_v3 Cicer arietinum L. HOM05D007220 ORTHO05D009058 2.8e-28 129.4 101 62.4
Nitab4.5_0000072g0560 Nicotiana tabacum HOM05D007220 ORTHO05D009058 3.6e-28 129.0 105 61.0
SalBow4G2286 Salvia bowleyana HOM05D007220 ORTHO05D009058 6.1e-28 128.3 184 53.3
Lj8A39T34 Lonicera japonica HOM05D007220 ORTHO05D009058 1.0e-27 127.5 106 63.2
Nitab4.5_0001548g0050 Nicotiana tabacum HOM05D007220 ORTHO05D009058 1.0e-27 127.5 107 61.7
HanXRQChr08g0223851 Helianthus annuus HOM05D007220 ORTHO05D009058 1.4e-27 127.1 176 44.9
EL10Ac3g05813 Beta vulgaris HOM05D007220 ORTHO05D009058 2.3e-27 126.3 104 61.5
Peaxi162Scf00241g00624 Petunia axillaris HOM05D007220 ORTHO05D009058 2.3e-27 126.3 105 60.0
Migut.F00451 Erythranthe guttata HOM05D007220 ORTHO05D009058 6.8e-27 124.8 96 61.5
Lj3g0016008 Lotus japonicus HOM05D007220 ORTHO05D009058 6.8e-27 124.8 106 58.5
Psat7g150000 Pisum sativum HOM05D007220 ORTHO05D009058 1.2e-26 124.0 104 59.6
unitig_46.g18768 Utricularia gibba HOM05D007220 ORTHO05D009058 1.2e-26 124.0 98 60.2
ECA233G2338 Erigeron canadensis HOM05D007220 ORTHO05D009058 2.0e-26 123.2 103 63.1
Lsat_1_v5_gn_8_9340 Lactuca sativa HOM05D007220 ORTHO05D009058 2.6e-26 122.9 183 44.8
Solyc03g083570.3 Solanum lycopersicum HOM05D007220 ORTHO05D009058 2.6e-26 122.9 108 59.3
Sopen03g023380 Solanum pennellii HOM05D007220 ORTHO05D009058 2.6e-26 122.9 108 59.3
CDE09G0763 Ceratophyllum demersum HOM05D007220 ORTHO05D009058 1.7e-25 120.2 97 62.9
PSO782G3417 Papaver somniferum HOM05D007220 ORTHO05D009058 2.8e-25 119.4 102 56.9
PSO478G4327 Papaver somniferum HOM05D007220 ORTHO05D009058 3.7e-25 119.0 102 57.8
Thhalv10015015m.g Eutrema salsugineum HOM05D007220 ORTHO05D009058 1.1e-24 117.5 118 69.5
Medtr4g035825 Medicago truncatula HOM05D007220 ORTHO05D009058 1.1e-24 117.5 182 41.8
SEGI_29714 Sequoiadendron giganteum HOM05D007220 ORTHO05D009058 2.4e-24 116.3 91 65.9
Zm00001eb230760 Zea mays HOM05D007220 ORTHO05D009058 2.4e-24 116.3 84 71.4
HPP92_002073 Vanilla planifolia HOM05D007220 ORTHO05D009058 1.0e-22 110.9 170 51.8
arahy.Tifrunner.gnm1.ann1.83G6QR Arachis hypogaea HOM05D007220 ORTHO05D009058 2.3e-22 109.8 78 64.1
TPR.G15117 Trifolium pratense HOM05D007220 ORTHO05D009058 3.0e-19 99.4 71 66.2
ATR0730G016 Amborella trichopoda HOM05D007220 ORTHO05D009058 8.9e-19 97.8 64 73.4
Potri.012G128000 Populus trichocarpa HOM05D007220 ORTHO05D009058 4.4e-18 95.5 104 46.2
PGSC0003DMG400023001 Solanum tuberosum HOM05D007220 ORTHO05D009058 1.8e-16 90.1 175 36.0
AUR62035102 Chenopodium quinoa HOM05D007220 ORTHO05D009058 7.0e-16 88.2 193 32.6
MD07G1256600 Malus domestica HOM05D007220 ORTHO05D009058 7.8e-15 84.7 53 73.6
AagrBONN_evm.TU.Sc2ySwM_228.5821 Anthoceros agrestis HOM05D007220 ORTHO05D009058 1.7e-14 83.6 94 44.7
Pp3c26_11240 Physcomitrium patens HOM05D007220 ORTHO05D009058 2.5e-13 79.7 94 48.9
Mapoly0002s0242 Marchantia polymorpha HOM05D007220 ORTHO05D009058 1.2e-12 77.4 70 52.9
MBI12_g20320_MAGBIO Magnolia biondii HOM05D007220 ORTHO05D009058 5.2e-11 72.0 44 75.0
TAR629G2293 Trochodendron aralioides HOM05D007220 ORTHO05D009058 1.2e-10 70.9 52 61.5
Prupe.2G280700 Prunus persica HOM05D007220 ORTHO05D009058 9.8e-10 67.8 140 37.9
DCAR_009422 Daucus carota HOM05D007220 ORTHO05D009058 1.7e-09 67.0 142 36.6
DCAR_009423 Daucus carota HOM05D007220 ORTHO05D009058 1.7e-09 67.0 142 36.6
Sed0003033 Sechium edule HOM05D007220 ORTHO05D009058 4.9e-09 65.5 158 38.0
MBI12_g14970_MAGBIO Magnolia biondii HOM05D007220 ORTHO05D009058 1.4e-08 63.9 55 58.2
MBI12_g25331_MAGBIO Magnolia biondii HOM05D007220 ORTHO05D009058 4.1e-08 62.4 58 55.2
Ca_20051_v3 Cicer arietinum L. HOM05D007220 ORTHO05D009058 3.5e-07 59.3 53 50.9
HanXRQChr04g0107801 Helianthus annuus HOM05D000901 ORTHO05D001160 7.8e-07 58.2 84 40.5


User provided reference genes

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