Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG3G7620 Aethionema arabicum HOM05D001603 ORTHO05D001393 1.5e-67 260.8 331 100.0
Aa31LG3G7600 Aethionema arabicum HOM05D001603 ORTHO05D058788 2.1e-13 80.9 69 53.6
AL8G25360 Arabidopsis lyrata HOM05D001603 ORTHO05D001393 5.1e-12 76.3 71 46.5
AT5G51105 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 1.5e-11 74.7 71 45.1
BcaC01g06072 Brassica carinata HOM05D001603 ORTHO05D001393 5.6e-11 72.8 70 50.0
CARHR042770 Cardamine hirsuta HOM05D001603 ORTHO05D001393 5.6e-11 72.8 73 47.9
AT4G09545 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 7.3e-11 72.4 73 46.6
CARHR181490 Cardamine hirsuta HOM05D001603 ORTHO05D001393 1.3e-10 71.6 64 50.0
AT3G42565 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 2.8e-10 70.5 73 45.2
BolC3t14309H Brassica oleracea HOM05D001603 ORTHO05D001393 2.8e-10 70.5 69 49.3
CARHR187420 Cardamine hirsuta HOM05D001603 ORTHO05D001393 2.8e-10 70.5 77 44.2
BcaC01g06071 Brassica carinata HOM05D001603 ORTHO05D001393 4.8e-10 69.7 71 45.1
A03p16350 Brassica napus HOM05D001603 ORTHO05D001393 4.8e-10 69.7 71 45.1
BcaC01g06102 Brassica carinata HOM05D001603 ORTHO05D001393 6.2e-10 69.3 70 45.7
BcaC01g06105 Brassica carinata HOM05D001603 ORTHO05D001393 6.2e-10 69.3 70 45.7
THA.LOC104809119 Tarenaya hassleriana HOM05D001603 ORTHO05D001393 6.2e-10 69.3 76 44.7
C03p19220 Brassica napus HOM05D001603 ORTHO05D001393 1.1e-09 68.6 69 47.8
Sp1g35035 Schrenkiella parvula HOM05D001603 ORTHO05D001393 1.4e-09 68.2 77 45.5
BcaC07g37176 Brassica carinata HOM05D001603 ORTHO05D001393 1.8e-09 67.8 77 45.5
C03p19230 Brassica napus HOM05D001603 ORTHO05D001393 1.8e-09 67.8 71 43.7
AT5G42895 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 2.4e-09 67.4 73 45.2
A03p16340 Brassica napus HOM05D001603 ORTHO05D001393 2.4e-09 67.4 69 46.4
A08p05250 Brassica napus HOM05D001603 ORTHO05D001393 2.4e-09 67.4 77 46.8
BraA03t10924Z Brassica rapa HOM05D001603 ORTHO05D001393 2.4e-09 67.4 69 46.4
A08p05310 Brassica napus HOM05D001603 ORTHO05D001393 3.1e-09 67.0 77 45.5
A08p05280 Brassica napus HOM05D001603 ORTHO05D001393 4.0e-09 66.6 75 48.0
A08p05260 Brassica napus HOM05D001603 ORTHO05D001393 5.3e-09 66.2 77 46.8
THA.LOC104801737 Tarenaya hassleriana HOM05D001603 ORTHO05D001393 5.3e-09 66.2 76 42.1
BcaC07g37175 Brassica carinata HOM05D001603 ORTHO05D001393 6.9e-09 65.9 77 45.5
BcaC07g37179 Brassica carinata HOM05D001603 ORTHO05D001393 6.9e-09 65.9 77 45.5
CARHR256980 Cardamine hirsuta HOM05D001603 ORTHO05D001393 6.9e-09 65.9 71 40.8
CARHR016560 Cardamine hirsuta HOM05D001603 ORTHO05D001393 9.0e-09 65.5 73 42.5
C08p05560 Brassica napus HOM05D001603 ORTHO05D001393 1.2e-08 65.1 76 46.1
BcaC07g37177 Brassica carinata HOM05D001603 ORTHO05D001393 1.5e-08 64.7 73 46.6
C08p05610 Brassica napus HOM05D001603 ORTHO05D001393 1.5e-08 64.7 77 46.8
C08p05590 Brassica napus HOM05D001603 ORTHO05D001393 2.0e-08 64.3 75 42.7
AT5G36490 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 2.6e-08 63.9 73 45.2
AT5G36500 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 2.6e-08 63.9 73 45.2
A08p06940 Brassica napus HOM05D001603 ORTHO05D001393 2.6e-08 63.9 77 44.2
CARHR283690 Cardamine hirsuta HOM05D001603 ORTHO05D001393 2.6e-08 63.9 77 42.9
BcaC07g37231 Brassica carinata HOM05D001603 ORTHO05D001393 3.4e-08 63.5 77 44.2
A08p05320 Brassica napus HOM05D001603 ORTHO05D001393 3.4e-08 63.5 72 45.8
THA.LOC104807891 Tarenaya hassleriana HOM05D001603 ORTHO05D001393 3.4e-08 63.5 72 43.1
A08p06930 Brassica napus HOM05D001603 ORTHO05D001393 4.5e-08 63.2 77 42.9
A08p06960 Brassica napus HOM05D001603 ORTHO05D001393 4.5e-08 63.2 72 44.4
AT5G36480 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 5.8e-08 62.8 73 43.8
AT5G36350 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 7.6e-08 62.4 73 43.8
AT5G36360 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 7.6e-08 62.4 73 43.8
AT5G36370 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 7.6e-08 62.4 73 43.8
AT5G36380 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 7.6e-08 62.4 73 43.8
AT5G36390 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 7.6e-08 62.4 73 43.8
AT5G36400 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 7.6e-08 62.4 73 43.8
AT5G36410 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 7.6e-08 62.4 73 43.8
AT5G36420 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 7.6e-08 62.4 73 43.8
AT5G36430 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 7.6e-08 62.4 73 43.8
AT5G36440 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 7.6e-08 62.4 73 43.8
AT5G36450 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 7.6e-08 62.4 73 43.8
AT5G36460 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 7.6e-08 62.4 73 43.8
AT5G36470 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 7.6e-08 62.4 73 43.8
AT5G36658 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 7.6e-08 62.4 73 43.8
AT5G44495 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 7.6e-08 62.4 64 46.9
C08p05570 Brassica napus HOM05D001603 ORTHO05D001393 7.6e-08 62.4 69 44.9
AT5G36662 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 1.3e-07 61.6 73 43.8
AT5G36739 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 1.3e-07 61.6 73 43.8
BcaC07g37174 Brassica carinata HOM05D001603 ORTHO05D001393 1.3e-07 61.6 77 44.2
THA.LOC104807823 Tarenaya hassleriana HOM05D001603 ORTHO05D001393 1.3e-07 61.6 70 41.4
A08p06920 Brassica napus HOM05D001603 ORTHO05D001393 1.7e-07 61.2 72 43.1
C03p17510 Brassica napus HOM05D001603 ORTHO05D001393 1.7e-07 61.2 65 44.6
C08p05580 Brassica napus HOM05D001603 ORTHO05D001393 1.7e-07 61.2 77 42.9
BolC3t14164H Brassica oleracea HOM05D001603 ORTHO05D001393 1.7e-07 61.2 65 44.6
CARHR119910 Cardamine hirsuta HOM05D001603 ORTHO05D001393 1.7e-07 61.2 65 43.1
Sp6g09890 Schrenkiella parvula HOM05D001603 ORTHO05D001393 1.7e-07 61.2 65 44.6
AT5G36550 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 2.2e-07 60.8 73 42.5
C02p62770 Brassica napus HOM05D001603 ORTHO05D001393 2.2e-07 60.8 65 40.0
BolC2t12348H Brassica oleracea HOM05D001603 ORTHO05D001393 2.2e-07 60.8 65 40.0
AT5G36520 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 2.9e-07 60.5 64 45.3
BcaB07g29691 Brassica carinata HOM05D001603 ORTHO05D001393 2.9e-07 60.5 65 40.0
BcaC07g37178 Brassica carinata HOM05D001603 ORTHO05D001393 2.9e-07 60.5 64 45.3
AL8G40580 Arabidopsis lyrata HOM05D001603 ORTHO05D001393 3.8e-07 60.1 65 41.5
BcaB07g30090 Brassica carinata HOM05D001603 ORTHO05D001393 3.8e-07 60.1 65 40.0
A03p15020 Brassica napus HOM05D001603 ORTHO05D001393 3.8e-07 60.1 65 44.6
A08p05290 Brassica napus HOM05D001603 ORTHO05D001393 3.8e-07 60.1 72 43.1
BraA03t10796Z Brassica rapa HOM05D001603 ORTHO05D001393 3.8e-07 60.1 65 44.6
Thhalv10005396m.g Eutrema salsugineum HOM05D001603 ORTHO05D001393 3.8e-07 60.1 65 43.1
AL7G16040 Arabidopsis lyrata HOM05D001603 ORTHO05D001393 4.9e-07 59.7 65 43.1
AT5G36657 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 4.9e-07 59.7 73 42.5
A08p05270 Brassica napus HOM05D001603 ORTHO05D001393 4.9e-07 59.7 72 43.1
THA.LOC104809637 Tarenaya hassleriana HOM05D001603 ORTHO05D001393 4.9e-07 59.7 76 42.1
AT4G35165 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 6.4e-07 59.3 65 43.1
A02p42780 Brassica napus HOM05D001603 ORTHO05D001393 6.4e-07 59.3 65 38.5
A08p05300 Brassica napus HOM05D001603 ORTHO05D001393 6.4e-07 59.3 72 43.1
BraA02t09204Z Brassica rapa HOM05D001603 ORTHO05D001393 6.4e-07 59.3 65 38.5
AT5G36540 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 8.4e-07 58.9 64 43.8
THA.LOC104811299 Tarenaya hassleriana HOM05D001603 ORTHO05D001393 8.4e-07 58.9 75 42.7
Carub.0008s2422 Capsella rubella HOM05D001603 ORTHO05D001393 1.1e-06 58.5 65 40.0
AL8G27490 Arabidopsis lyrata HOM05D001603 ORTHO05D001393 1.4e-06 58.2 65 41.5
Carub.0008s1421 Capsella rubella HOM05D001603 ORTHO05D001393 1.4e-06 58.2 65 43.1
Carub.0007s0514 Capsella rubella HOM05D001603 ORTHO05D001393 1.9e-06 57.8 65 40.0
Sp2g17840 Schrenkiella parvula HOM05D001603 ORTHO05D001393 1.9e-06 57.8 65 40.0
Sp6g15130 Schrenkiella parvula HOM05D001603 ORTHO05D001393 1.9e-06 57.8 65 41.5
THA.LOC104811131 Tarenaya hassleriana HOM05D001603 ORTHO05D001393 1.9e-06 57.8 75 41.3
Carub.0008s1450 Capsella rubella HOM05D001603 ORTHO05D001393 5.4e-06 56.2 65 43.1
AT5G54062 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 7.1e-06 55.8 65 41.5
Carub.0008s1315 Capsella rubella HOM05D001603 ORTHO05D001393 7.1e-06 55.8 65 40.0
AT5G36330 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 9.3e-06 55.5 73 41.1
BcaB05g21994 Brassica carinata HOM05D001603 ORTHO05D001393 9.3e-06 55.5 65 40.0
A03p28440 Brassica napus HOM05D001603 ORTHO05D001393 9.3e-06 55.5 73 39.7
C03p34370 Brassica napus HOM05D001603 ORTHO05D001393 9.3e-06 55.5 73 39.7
BolC3t15747H Brassica oleracea HOM05D001603 ORTHO05D001393 9.3e-06 55.5 73 39.7
BraA03t12049Z Brassica rapa HOM05D001603 ORTHO05D001393 9.3e-06 55.5 73 39.7


User provided reference genes

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