Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG3G7440 Aethionema arabicum HOM05D003971 ORTHO05D004762 8.1e-36 153.3 82 100.0
Sp6g13140 Schrenkiella parvula HOM05D003971 ORTHO05D004762 1.3e-22 109.4 81 71.6
AT5G50970 Arabidopsis thaliana HOM05D003971 ORTHO05D004762 1.1e-19 99.8 77 71.4
CARHR257220 Cardamine hirsuta HOM05D003971 ORTHO05D004762 1.1e-19 99.8 77 71.4
AL8G25160 Arabidopsis lyrata HOM05D003971 ORTHO05D004762 1.8e-19 99.0 77 68.8
THA.LOC104825039 Tarenaya hassleriana HOM05D003971 ORTHO05D004762 3.1e-19 98.2 82 69.5
Thhalv10013209m.g Eutrema salsugineum HOM05D003971 ORTHO05D004762 5.8e-18 94.0 89 60.7
Carub.0008s1099 Capsella rubella HOM05D003971 ORTHO05D004762 1.1e-13 79.7 77 66.2
A03p16430 Brassica napus HOM05D003971 ORTHO05D004762 1.5e-13 79.3 76 60.5
BraA03t10933Z Brassica rapa HOM05D003971 ORTHO05D004762 1.5e-13 79.3 76 60.5
BcaC01g06062 Brassica carinata HOM05D003971 ORTHO05D004762 2.1e-12 75.5 78 56.4
C03p19320 Brassica napus HOM05D003971 ORTHO05D004762 2.1e-12 75.5 78 56.4
BolC3t14318H Brassica oleracea HOM05D003971 ORTHO05D004762 2.1e-12 75.5 78 56.4
Glyma.04G201300 Glycine max HOM05D003971 ORTHO05D004762 2.2e-09 65.5 59 57.6
Glyma.06G163900 Glycine max HOM05D003971 ORTHO05D004762 2.2e-09 65.5 59 57.6
Psat5g055040 Pisum sativum HOM05D003971 ORTHO05D004762 8.4e-09 63.5 61 60.7
ClCG03G004040 Citrullus lanatus HOM05D003971 ORTHO05D004762 1.4e-08 62.8 60 58.3
GSVIVG01008647001 Vitis vinifera HOM05D003971 ORTHO05D004762 1.4e-08 62.8 78 46.2
MELO3C002386.2 Cucumis melo HOM05D003971 ORTHO05D004762 1.9e-08 62.4 60 56.7
Peaxi162Scf01168g00013 Petunia axillaris HOM05D003971 ORTHO05D004762 2.5e-08 62.0 73 46.6
arahy.Tifrunner.gnm1.ann1.9UH1TF Arachis hypogaea HOM05D003971 ORTHO05D004762 3.2e-08 61.6 54 57.4
Duzib084G0567 Durio zibethinus HOM05D003971 ORTHO05D004762 3.2e-08 61.6 69 53.6
Phvul.009G161300 Phaseolus vulgaris HOM05D003971 ORTHO05D004762 3.2e-08 61.6 58 55.2
CsaV3_1G009920 Cucumis sativus L. HOM05D003971 ORTHO05D004762 4.2e-08 61.2 63 50.8
MD06G1130900 Malus domestica HOM05D003971 ORTHO05D004762 4.2e-08 61.2 63 52.4
MD14G1147500 Malus domestica HOM05D003971 ORTHO05D004762 5.5e-08 60.8 63 52.4
CSS0040569 Camellia sinensis var. sinensis HOM05D003971 ORTHO05D004762 7.1e-08 60.5 65 52.3
VMungo1309G0830 Vigna mungo HOM05D003971 ORTHO05D004762 7.1e-08 60.5 71 47.9
Ciclev10031176m.g Citrus clementina HOM05D003971 ORTHO05D004762 9.3e-08 60.1 73 47.9
Sed0008211 Sechium edule HOM05D003971 ORTHO05D004762 1.2e-07 59.7 61 59.0
Lj1g0015188 Lotus japonicus HOM05D003971 ORTHO05D004762 1.6e-07 59.3 60 53.3
Medtr3g098600 Medicago truncatula HOM05D003971 ORTHO05D004762 1.6e-07 59.3 60 51.7
TAR622G0096 Trochodendron aralioides HOM05D003971 ORTHO05D004762 1.6e-07 59.3 80 45.0
Aqoxy1G00170 Aquilegia oxysepala HOM05D003971 ORTHO05D004762 2.1e-07 58.9 72 48.6
Gorai.003G116700 Gossypium raimondii HOM05D003971 ORTHO05D004762 2.1e-07 58.9 84 50.0
Prupe.5G142100 Prunus persica HOM05D003971 ORTHO05D004762 2.1e-07 58.9 55 56.4
TPR.G25960 Trifolium pratense HOM05D003971 ORTHO05D004762 2.7e-07 58.5 60 51.7
Dinv23223 Davidia involucrata HOM05D003971 ORTHO05D004762 7.9e-07 57.0 80 43.8
HanXRQChr05g0155401 Helianthus annuus HOM05D003971 ORTHO05D004762 7.9e-07 57.0 62 51.6
Nitab4.5_0002584g0020 Nicotiana tabacum HOM05D003971 ORTHO05D004762 7.9e-07 57.0 76 46.1
VMungo0251G1950 Vigna mungo HOM05D000512 ORTHO05D000861 7.9e-07 57.0 53 58.5
Gohir.A03G056200 Gossypium hirsutum HOM05D003971 ORTHO05D004762 1.0e-06 56.6 84 48.8
Nn4g22021 Nelumbo nucifera HOM05D003971 ORTHO05D004762 1.0e-06 56.6 75 45.3
Nitab4.5_0008403g0010 Nicotiana tabacum HOM05D003971 ORTHO05D004762 1.3e-06 56.2 79 41.8
Cpa.g.sc13.168 Carica papaya HOM05D003971 ORTHO05D004762 1.8e-06 55.8 46 63.0
FvH4_5g09480 Fragaria vesca HOM05D003971 ORTHO05D004762 1.8e-06 55.8 55 52.7
FAN18G1571 Fragaria x ananassa HOM05D003971 ORTHO05D004762 1.8e-06 55.8 55 52.7
Gohir.D03G110400 Gossypium hirsutum HOM05D003971 ORTHO05D004762 3.9e-06 54.7 53 58.5
Lalb_Chr11g0069181 Lupinus albus HOM05D003971 ORTHO05D004762 5.1e-06 54.3 64 50.0
PSO384G2792 Papaver somniferum HOM05D003971 ORTHO05D004762 5.1e-06 54.3 77 44.2
CDE02G2184 Ceratophyllum demersum HOM05D003971 ORTHO05D004762 8.7e-06 53.5 73 45.2


User provided reference genes

Program Settings