Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG3G6930 Aethionema arabicum HOM05D007169 ORTHO05D007243 1.3e-154 549.7 276 100.0
Thhalv10014456m.g Eutrema salsugineum HOM05D007169 ORTHO05D007243 1.6e-120 436.4 255 85.1
Sp6g12560 Schrenkiella parvula HOM05D007169 ORTHO05D007243 3.0e-119 432.2 255 85.9
SpUn0015_0080 Schrenkiella parvula HOM05D007169 ORTHO05D007243 3.0e-119 432.2 255 85.9
SpUn0039_0020 Schrenkiella parvula HOM05D007169 ORTHO05D007243 3.0e-119 432.2 255 85.9
AT5G50410 Arabidopsis thaliana HOM05D007169 ORTHO05D007243 3.1e-116 422.2 256 85.5
AL8G24630 Arabidopsis lyrata HOM05D007169 ORTHO05D007243 1.2e-115 420.2 252 86.1
Carub.0008s1052 Capsella rubella HOM05D007169 ORTHO05D007243 5.9e-115 417.9 256 84.4
BcaB05g24052 Brassica carinata HOM05D007169 ORTHO05D007243 3.6e-112 408.7 256 81.2
BolC2t08225H Brassica oleracea HOM05D007169 ORTHO05D007243 6.8e-111 404.4 251 83.7
A02p12790 Brassica napus HOM05D007169 ORTHO05D007243 2.2e-109 399.4 256 81.6
BraA02t06336Z Brassica rapa HOM05D007169 ORTHO05D007243 2.2e-109 399.4 256 81.6
BcaC03g14651 Brassica carinata HOM05D007169 ORTHO05D007243 3.7e-109 398.7 251 82.1
C02p20850 Brassica napus HOM05D007169 ORTHO05D007243 1.8e-108 396.4 247 83.0
THA.LOC104803148 Tarenaya hassleriana HOM05D007169 ORTHO05D007243 8.3e-101 370.9 256 75.4
CARHR257950 Cardamine hirsuta HOM05D007169 ORTHO05D007243 2.1e-91 339.7 253 71.9
Cpa.g.sc13.118 Carica papaya HOM05D007169 ORTHO05D007243 8.1e-80 301.2 249 63.9
Duzib068G0521 Durio zibethinus HOM05D007169 ORTHO05D007243 2.6e-78 296.2 254 60.2
Thecc.03G128900 Theobroma cacao HOM05D007169 ORTHO05D007243 8.4e-77 291.2 249 61.8
Gohir.D09G247400 Gossypium hirsutum HOM05D007169 ORTHO05D007243 5.6e-73 278.5 251 60.2
Gorai.006G271900 Gossypium raimondii HOM05D007169 ORTHO05D007243 5.6e-73 278.5 251 60.2
Gohir.A09G246900 Gossypium hirsutum HOM05D007169 ORTHO05D007243 4.8e-72 275.4 250 59.6
Manes.01G190300 Manihot esculenta HOM05D007169 ORTHO05D007243 4.8e-72 275.4 251 61.8
Ciclev10018838m.g Citrus clementina HOM05D003858 ORTHO05D005878 1.1e-71 274.2 270 56.7
Sabra15G0116800 Salix brachista HOM05D007169 ORTHO05D007243 3.4e-70 269.2 252 59.9
TWI23G0849 Tripterygium wilfordii HOM05D007169 ORTHO05D007243 5.8e-70 268.5 253 59.3
Atru.chr9.1127 Acer truncatum HOM05D007169 ORTHO05D007243 4.9e-69 265.4 261 55.6
Potri.015G096000 Populus trichocarpa HOM05D007169 ORTHO05D007243 4.2e-68 262.3 252 58.7
Eucgr.K02727 Eucalyptus grandis HOM05D007169 ORTHO05D007243 5.1e-66 255.4 224 57.6
Potri.012G097500 Populus trichocarpa HOM05D007169 ORTHO05D007243 6.7e-66 255.0 251 57.4
CiPaw.12G042700 Carya illinoinensis HOM05D007169 ORTHO05D007243 8.7e-66 254.6 249 55.4
arahy.Tifrunner.gnm1.ann1.NVZ1RT Arachis hypogaea HOM05D007169 ORTHO05D007243 7.4e-65 251.5 220 60.5
arahy.Tifrunner.gnm1.ann1.ZT3MCZ Arachis hypogaea HOM05D007169 ORTHO05D007243 7.4e-65 251.5 220 60.5
Phvul.009G166500 Phaseolus vulgaris HOM05D007169 ORTHO05D007243 7.4e-65 251.5 221 60.2
QL10p002966 Quercus lobata HOM05D007169 ORTHO05D007243 2.1e-64 250.0 257 53.3
Lj1g0026378 Lotus japonicus HOM05D007169 ORTHO05D007243 3.7e-64 249.2 219 60.3
Prupe.5G151300 Prunus persica HOM05D007169 ORTHO05D007243 6.2e-64 248.4 260 54.6
CsaV3_1G009620 Cucumis sativus L. HOM05D007169 ORTHO05D007243 1.4e-63 247.3 254 54.7
FvH4_5g08300 Fragaria vesca HOM05D007169 ORTHO05D007243 4.0e-63 245.7 221 57.5
MELO3C002358.2 Cucumis melo HOM05D007169 ORTHO05D007243 9.0e-63 244.6 259 54.4
Ca_16044_v3 Cicer arietinum L. HOM05D007169 ORTHO05D007243 1.5e-62 243.8 236 54.2
Glyma.06G170200 Glycine max HOM05D007169 ORTHO05D007243 2.0e-62 243.4 250 53.6
ClCG03G003730 Citrullus lanatus HOM05D007169 ORTHO05D007243 2.6e-62 243.0 253 54.2
RcHm_v2.0_Chr7g0190221 Rosa chinensis HOM05D007169 ORTHO05D007243 2.9e-61 239.6 226 56.2
Psat5g051240 Pisum sativum HOM05D007169 ORTHO05D007243 4.9e-61 238.8 236 55.5
Gorai.004G276100 Gossypium raimondii HOM05D007169 ORTHO05D007243 8.4e-61 238.0 211 60.7
FAN04G2393 Fragaria x ananassa HOM05D007169 ORTHO05D007243 1.4e-60 237.3 260 51.9
PGR044G0546 Punica granatum HOM05D007169 ORTHO05D007243 1.9e-60 236.9 250 50.4
Lalb_Chr08g0237141 Lupinus albus HOM05D007169 ORTHO05D007243 2.1e-59 233.4 251 53.0
TPR.G14220 Trifolium pratense HOM05D007169 ORTHO05D007243 3.5e-59 232.6 224 54.5
FAN18G0310 Fragaria x ananassa HOM05D007169 ORTHO05D007243 1.3e-58 230.7 260 50.0
Sed0023866 Sechium edule HOM05D007169 ORTHO05D007243 3.9e-58 229.2 254 53.5
Medtr3g099350 Medicago truncatula HOM05D007169 ORTHO05D007243 6.7e-58 228.4 226 54.0
MD06G1142100 Malus domestica HOM05D007169 ORTHO05D007243 1.6e-56 223.8 261 49.4
RhsimUnG0231000 Rhododendron simsii HOM05D007169 ORTHO05D007243 1.6e-56 223.8 243 50.6
CANSAT80G1416 Cannabis sativa HOM05D007169 ORTHO05D007243 6.2e-56 221.9 236 55.1
MD14G1157400 Malus domestica HOM05D007169 ORTHO05D007243 3.1e-55 219.5 275 45.8
GSVIVG01008542001 Vitis vinifera HOM05D003858 ORTHO05D005878 4.5e-54 215.7 243 49.8
Cfa018798 Carpinus fangiana HOM05D007169 ORTHO05D007243 2.9e-53 213.0 208 55.3
Sed0005692 Sechium edule HOM05D007169 ORTHO05D007243 2.9e-53 213.0 244 49.2
Gohir.D08G258666 Gossypium hirsutum HOM05D007169 ORTHO05D007243 3.8e-53 212.6 158 67.7
Haze_07134 Corylus avellana HOM05D007169 ORTHO05D007243 4.2e-52 209.1 208 54.3
Gorai.008G206100 Gossypium raimondii HOM05D007169 ORTHO05D007243 4.2e-52 209.1 210 54.3
Gohir.D12G191801 Gossypium hirsutum HOM05D007169 ORTHO05D007243 1.6e-51 207.2 210 53.8
Sc04g0000670 Simmondsia chinensis HOM05D007169 ORTHO05D007243 1.6e-51 207.2 233 50.6
Hma1.2p1_0014F.1_g009470 Hydrangea macrophylla HOM05D007169 ORTHO05D007243 1.8e-50 203.8 220 51.4
VMungo1309G2045 Vigna mungo HOM05D007169 ORTHO05D007243 3.3e-49 199.5 179 58.7
Nn3g16473 Nelumbo nucifera HOM05D007169 ORTHO05D007243 1.3e-48 197.6 251 46.6
TAR371G0734 Trochodendron aralioides HOM05D007169 ORTHO05D007243 4.1e-47 192.6 239 45.2
CANSAT80G0844 Cannabis sativa HOM05D007169 ORTHO05D007243 9.0e-47 191.4 157 63.1
COL.COLO4_28120 Corchorus olitorius HOM05D007169 ORTHO05D007243 1.2e-46 191.0 249 47.8
Rhsim08G0190100 Rhododendron simsii HOM05D007169 ORTHO05D007243 2.6e-46 189.9 224 48.2
Medtr2g045120 Medicago truncatula HOM05D007169 ORTHO05D007243 5.9e-46 188.7 181 54.7
Medtr2g445400 Medicago truncatula HOM05D007169 ORTHO05D007243 5.9e-46 188.7 181 54.7
Dinv23144 Davidia involucrata HOM05D007169 ORTHO05D007243 2.9e-45 186.4 207 51.2
Lsat_1_v5_gn_1_28980 Lactuca sativa HOM05D007169 ORTHO05D007243 3.8e-45 186.0 248 42.7
Lalb_Chr23g0273701 Lupinus albus HOM05D007169 ORTHO05D007243 3.8e-45 186.0 210 48.1
HanXRQChr02g0034741 Helianthus annuus HOM05D007169 ORTHO05D007243 8.5e-45 184.9 262 39.7
TAR374G1569 Trochodendron aralioides HOM05D007169 ORTHO05D007243 1.6e-43 180.6 269 39.4
Actinidia18344 Actinidia chinensis HOM05D007169 ORTHO05D007243 2.1e-43 180.3 147 61.9
CSS0048648 Camellia sinensis var. sinensis HOM05D007169 ORTHO05D007243 6.1e-43 178.7 160 58.8
vmacro07808 Vaccinium macrocarpon HOM05D007169 ORTHO05D007243 1.0e-42 177.9 238 43.7
AUR62029615 Chenopodium quinoa HOM05D007169 ORTHO05D007243 1.1e-41 174.5 159 56.6
DCAR_016391 Daucus carota HOM05D007169 ORTHO05D007243 4.3e-41 172.6 208 49.5
SalBow5G3517 Salvia bowleyana HOM05D007169 ORTHO05D007243 5.7e-41 172.2 151 56.3
Lj5A96T48 Lonicera japonica HOM05D007169 ORTHO05D007243 1.7e-40 170.6 153 57.5
Oeu006492.1 Olea europaea HOM05D007169 ORTHO05D007243 1.7e-40 170.6 139 62.6
MSTRG.11390 Avicennia marina HOM05D007169 ORTHO05D007243 2.2e-40 170.2 154 55.8
SalBow5G4624 Salvia bowleyana HOM05D007169 ORTHO05D007243 2.2e-40 170.2 151 55.6
ECA247G3219 Erigeron canadensis HOM05D007169 ORTHO05D007243 4.8e-40 169.1 243 41.6
TAR622G0369 Trochodendron aralioides HOM05D007169 ORTHO05D007243 6.3e-40 168.7 167 52.7
DCAR_021617 Daucus carota HOM05D007169 ORTHO05D007243 1.4e-39 167.5 215 44.7
EL10Ac5g11418 Beta vulgaris HOM05D007169 ORTHO05D007243 1.8e-39 167.2 136 61.8
Peaxi162Scf00089g01624 Petunia axillaris HOM05D007169 ORTHO05D007243 6.9e-39 165.2 141 61.0
Migut.I00155 Erythranthe guttata HOM05D007169 ORTHO05D007243 5.9e-38 162.2 139 55.4
SGA_v2.0_scaffold56G20032 Striga asiatica HOM05D007169 ORTHO05D007243 5.9e-38 162.2 137 57.7
Solyc03g112570.2 Solanum lycopersicum HOM05D007169 ORTHO05D007243 1.7e-37 160.6 143 57.3
Sopen03g031630 Solanum pennellii HOM05D007169 ORTHO05D007243 1.7e-37 160.6 143 57.3
Ah.02g111120 Amaranthus hybridus HOM05D007169 ORTHO05D007243 2.9e-37 159.8 142 58.5
PGSC0003DMG400018172 Solanum tuberosum HOM05D007169 ORTHO05D007243 1.1e-36 157.9 143 58.0
Cc06_g22780 Coffea canephora HOM05D007169 ORTHO05D007243 2.1e-35 153.7 145 55.2
Aqoxy3G00802 Aquilegia oxysepala HOM05D007169 ORTHO05D007243 2.7e-35 153.3 175 45.7
PSO017G4677 Papaver somniferum HOM05D007169 ORTHO05D007243 4.7e-35 152.5 156 50.6
PSO478G3704 Papaver somniferum HOM05D007169 ORTHO05D007243 4.7e-35 152.5 182 48.4
CAN.G338.2 Capsicum annuum HOM05D007169 ORTHO05D007243 1.0e-34 151.4 142 57.0
FAN08G0105 Fragaria x ananassa HOM05D007169 ORTHO05D007243 1.4e-34 151.0 163 50.9
HPP92_011766 Vanilla planifolia HOM05D007169 ORTHO05D007243 3.9e-34 149.4 221 40.3
unitig_0.g2530 Utricularia gibba HOM05D007169 ORTHO05D007243 1.8e-31 140.6 146 50.0
HPP92_011770 Vanilla planifolia HOM05D007169 ORTHO05D007243 1.8e-31 140.6 149 47.0
ATR0561G062 Amborella trichopoda HOM05D011398 ORTHO05D007243 5.3e-31 139.0 223 38.1
Hund26053 Selenicereus undatus HOM05D007169 ORTHO05D007243 3.9e-26 122.9 90 63.3
Os08g0531200 Oryza sativa ssp. japonica HOM05D011398 ORTHO05D007243 1.5e-25 120.9 237 33.8
Zm00001eb175120 Zea mays HOM05D011398 ORTHO05D007243 6.3e-24 115.5 169 39.6
SEGI_24222 Sequoiadendron giganteum HOM05D007169 ORTHO05D007243 1.0e-21 108.2 88 54.5
Nitab4.5_0011992g0030 Nicotiana tabacum HOM05D007169 ORTHO05D007243 1.7e-21 107.5 85 62.4
Sabra12G0071300 Salix brachista HOM05D000677 ORTHO05D000727 2.1e-19 100.5 79 64.6
arahy.Tifrunner.gnm1.ann1.M1N3UH Arachis hypogaea HOM05D002218 ORTHO05D007243 1.4e-15 87.8 67 64.2
CBR_g46730 Chara braunii HOM05D011398 ORTHO05D007243 1.0e-13 81.6 88 42.0
Mapoly0022s0039 Marchantia polymorpha HOM05D011398 ORTHO05D007243 6.1e-11 72.4 60 46.7
CBR_g30247 Chara braunii HOM05D011398 ORTHO05D007243 5.2e-10 69.3 86 37.2
Pp3c9_18230 Physcomitrium patens HOM05D011398 ORTHO05D007243 7.0e-07 58.9 67 35.8
AagrBONN_evm.TU.Sc2ySwM_344.3697 Anthoceros agrestis HOM05D011398 ORTHO05D007243 7.7e-06 55.5 64 37.5


User provided reference genes

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