Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG3G6480 Aethionema arabicum HOM05D005138 ORTHO05D006318 6.3e-70 267.3 134 100.0
BcaC09g48226 Brassica carinata HOM05D005138 ORTHO05D006318 3.8e-67 258.1 134 94.8
A03p37550 Brassica napus HOM05D005138 ORTHO05D006318 3.8e-67 258.1 134 94.8
C01p53060 Brassica napus HOM05D005138 ORTHO05D006318 3.8e-67 258.1 134 94.8
C03p45540 Brassica napus HOM05D005138 ORTHO05D006318 3.8e-67 258.1 134 94.8
BcaB04g18689 Brassica carinata HOM05D005138 ORTHO05D006318 8.5e-67 256.9 134 94.0
Sp3g10480 Schrenkiella parvula HOM05D005138 ORTHO05D006318 1.1e-66 256.5 134 94.0
AL3G23920 Arabidopsis lyrata HOM05D005138 ORTHO05D006318 2.5e-66 255.4 134 93.3
CARHR086810 Cardamine hirsuta HOM05D005138 ORTHO05D006318 3.2e-66 255.0 134 93.3
AT3G12260 Arabidopsis thaliana HOM05D005138 ORTHO05D006318 9.4e-66 253.4 134 92.5
Carub.0003s1162 Capsella rubella HOM05D005138 ORTHO05D006318 9.4e-66 253.4 134 91.8
Thhalv10021751m.g Eutrema salsugineum HOM05D005138 ORTHO05D006318 9.4e-66 253.4 134 92.5
BraA03t12909Z Brassica rapa HOM05D005138 ORTHO05D006318 1.0e-64 250.0 144 88.2
C05p55530 Brassica napus HOM05D005138 ORTHO05D006318 1.8e-64 249.2 143 87.4
BolC3t16831H Brassica oleracea HOM05D005138 ORTHO05D006318 1.8e-64 249.2 143 88.1
BolC1t05249H Brassica oleracea HOM05D005138 ORTHO05D006318 2.3e-64 248.8 147 86.4
BolC5t34219H Brassica oleracea HOM05D005138 ORTHO05D006318 5.2e-64 247.7 143 86.7
A05p37100 Brassica napus HOM05D005138 ORTHO05D006318 1.1e-63 246.5 141 87.2
BraA05t22507Z Brassica rapa HOM05D005138 ORTHO05D006318 1.1e-63 246.5 141 87.2
THA.LOC104826756 Tarenaya hassleriana HOM05D005138 ORTHO05D006318 5.5e-58 227.6 135 83.7
THA.LOC104799320 Tarenaya hassleriana HOM05D005138 ORTHO05D006318 2.8e-54 215.3 135 81.5
PGR044G2178 Punica granatum HOM05D005138 ORTHO05D006318 1.2e-52 209.9 131 80.2
Actinidia34769 Actinidia chinensis HOM05D005138 ORTHO05D006318 2.7e-52 208.8 129 81.4
CiPaw.13G015300 Carya illinoinensis HOM05D005138 ORTHO05D006318 1.7e-51 206.1 129 77.5
vmacro10390 Vaccinium macrocarpon HOM05D005138 ORTHO05D006318 1.7e-51 206.1 131 77.1
CiPaw.14G008900 Carya illinoinensis HOM05D005138 ORTHO05D006318 6.5e-51 204.1 131 77.1
FAN03G2670 Fragaria x ananassa HOM05D005138 ORTHO05D006318 1.1e-50 203.4 131 77.1
FAN06G4838 Fragaria x ananassa HOM05D005138 ORTHO05D006318 1.1e-50 203.4 131 77.1
TAR362G0697 Trochodendron aralioides HOM05D005138 ORTHO05D006318 1.1e-50 203.4 131 78.6
Duzib128G1035 Durio zibethinus HOM05D005138 ORTHO05D006318 1.5e-50 203.0 131 77.1
Gorai.011G218700 Gossypium raimondii HOM05D005138 ORTHO05D006318 1.5e-50 203.0 131 77.1
FvH4_7g03540 Fragaria vesca HOM05D005138 ORTHO05D006318 1.9e-50 202.6 131 77.1
Gohir.A10G188000 Gossypium hirsutum HOM05D005138 ORTHO05D006318 3.2e-50 201.8 131 77.1
Duzib114G0920 Durio zibethinus HOM05D005138 ORTHO05D006318 4.2e-50 201.4 131 77.1
Gohir.D10G195900 Gossypium hirsutum HOM05D005138 ORTHO05D006318 4.2e-50 201.4 131 76.3
RcHm_v2.0_Chr1g0325871 Rosa chinensis HOM05D005138 ORTHO05D006318 5.5e-50 201.1 131 75.6
Manes.11G007200 Manihot esculenta HOM05D005138 ORTHO05D006318 9.4e-50 200.3 131 77.9
CSS0020361 Camellia sinensis var. sinensis HOM05D005138 ORTHO05D006318 1.2e-49 199.9 130 76.2
Eucgr.G03216 Eucalyptus grandis HOM05D005138 ORTHO05D006318 1.2e-49 199.9 134 75.4
Hma1.2p1_0837F.1_g226140 Hydrangea macrophylla HOM05D005138 ORTHO05D006318 1.2e-49 199.9 131 76.3
Manes.04G157100 Manihot esculenta HOM05D005138 ORTHO05D006318 1.2e-49 199.9 131 76.3
DCAR_029715 Daucus carota HOM05D005138 ORTHO05D006318 2.1e-49 199.1 131 74.0
FAN10G0593 Fragaria x ananassa HOM05D005138 ORTHO05D006318 3.6e-49 198.4 131 75.6
FAN10G2449 Fragaria x ananassa HOM05D005138 ORTHO05D006318 3.6e-49 198.4 131 75.6
Thecc.10G149000 Theobroma cacao HOM05D005138 ORTHO05D006318 4.7e-49 198.0 131 74.0
Lsat_1_v5_gn_1_116501 Lactuca sativa HOM05D005138 ORTHO05D006318 6.1e-49 197.6 125 78.4
MD07G1047200 Malus domestica HOM05D005138 ORTHO05D006318 6.1e-49 197.6 131 75.6
Sed0002262 Sechium edule HOM05D005138 ORTHO05D006318 6.1e-49 197.6 131 74.0
PSO384G1335 Papaver somniferum HOM05D005138 ORTHO05D006318 1.4e-48 196.4 131 74.0
Haze_03004 Corylus avellana HOM05D005138 ORTHO05D006318 1.8e-48 196.1 129 72.9
PSO135G0826 Papaver somniferum HOM05D005138 ORTHO05D006318 1.8e-48 196.1 131 74.0
MBI13_g09225_MAGBIO Magnolia biondii HOM05D005138 ORTHO05D006318 2.3e-48 195.7 131 75.6
Cpa.g.sc169.49 Carica papaya HOM05D005138 ORTHO05D006318 3.0e-48 195.3 131 74.8
Zm00001eb001400 Zea mays HOM05D005138 ORTHO05D006318 5.2e-48 194.5 131 72.5
Atru.chr12.1279 Acer truncatum HOM05D005138 ORTHO05D006318 8.8e-48 193.7 131 72.5
HanXRQChr11g0341771 Helianthus annuus HOM05D005138 ORTHO05D006318 8.8e-48 193.7 127 75.6
Cfa010943 Carpinus fangiana HOM05D005138 ORTHO05D006318 1.2e-47 193.4 129 71.3
Dinv44706 Davidia involucrata HOM05D005138 ORTHO05D006318 2.0e-47 192.6 129 73.6
Prupe.2G041500 Prunus persica HOM05D005138 ORTHO05D006318 2.0e-47 192.6 131 73.3
SGA_v2.0_scaffold43G16284 Striga asiatica HOM05D005138 ORTHO05D006318 2.0e-47 192.6 130 72.3
MD02G1279300 Malus domestica HOM05D005138 ORTHO05D006318 2.6e-47 192.2 131 72.5
Aqoxy2G00421 Aquilegia oxysepala HOM05D005138 ORTHO05D006318 5.7e-47 191.0 128 72.7
MELO3C012486.2 Cucumis melo HOM05D005138 ORTHO05D006318 1.3e-46 189.9 139 69.8
Migut.N01855 Erythranthe guttata HOM05D005138 ORTHO05D006318 1.3e-46 189.9 129 70.5
Ah.12g059980 Amaranthus hybridus HOM05D005138 ORTHO05D006318 1.7e-46 189.5 123 74.8
CDE04G1620 Ceratophyllum demersum HOM05D005138 ORTHO05D006318 1.7e-46 189.5 131 72.5
Os07g0640100 Oryza sativa ssp. japonica HOM05D005138 ORTHO05D006318 1.7e-46 189.5 129 73.6
CsaV3_5G036890 Cucumis sativus L. HOM05D005138 ORTHO05D006318 3.7e-46 188.3 125 72.8
Ciclev10002826m.g Citrus clementina HOM05D005138 ORTHO05D006318 4.9e-46 188.0 131 70.2
QL04p018722 Quercus lobata HOM05D005138 ORTHO05D006318 4.9e-46 188.0 130 71.5
CANSAT56G0322 Cannabis sativa HOM05D005138 ORTHO05D006318 1.4e-45 186.4 131 71.8
Glyma.15G231900 Glycine max HOM05D005138 ORTHO05D006318 1.4e-45 186.4 134 67.2
Sc10g0004520 Simmondsia chinensis HOM05D005138 ORTHO05D006318 2.4e-45 185.7 127 70.1
SGA_v2.0_scaffold232G43489 Striga asiatica HOM05D005138 ORTHO05D006318 2.4e-45 185.7 130 70.8
Cc07_g21240 Coffea canephora HOM05D005138 ORTHO05D006318 3.1e-45 185.3 127 68.5
TWI74G0500 Tripterygium wilfordii HOM05D005138 ORTHO05D006318 3.1e-45 185.3 131 68.7
AUR62031745 Chenopodium quinoa HOM05D005138 ORTHO05D006318 4.1e-45 184.9 124 71.8
AUR62032630 Chenopodium quinoa HOM05D005138 ORTHO05D006318 4.1e-45 184.9 124 71.8
TWI38G0338 Tripterygium wilfordii HOM05D005138 ORTHO05D006318 4.1e-45 184.9 133 66.2
PGSC0003DMG400004276 Solanum tuberosum HOM05D005138 ORTHO05D006318 1.2e-44 183.3 128 66.4
arahy.Tifrunner.gnm1.ann1.EVE7SV Arachis hypogaea HOM05D005138 ORTHO05D006318 1.6e-44 183.0 127 68.5
arahy.Tifrunner.gnm1.ann1.K7P4IE Arachis hypogaea HOM05D005138 ORTHO05D006318 1.6e-44 183.0 127 68.5
Glyma.09G091002 Glycine max HOM05D005138 ORTHO05D006318 1.6e-44 183.0 128 68.0
HPP92_021197 Vanilla planifolia HOM05D005138 ORTHO05D006318 1.6e-44 183.0 124 72.6
Glyma.13G193600 Glycine max HOM05D005138 ORTHO05D006318 2.0e-44 182.6 128 68.0
ATR1096G082 Amborella trichopoda HOM05D005138 ORTHO05D006318 3.5e-44 181.8 128 68.8
EL10Ac2g02769 Beta vulgaris HOM05D005138 ORTHO05D000392 3.5e-44 181.8 122 72.1
Aqoxy2G00420 Aquilegia oxysepala HOM05D000001 ORTHO05D007291 5.9e-44 181.0 126 70.6
Lalb_Chr03g0032141 Lupinus albus HOM05D005138 ORTHO05D006318 2.3e-43 179.1 134 66.4
Nitab4.5_0010402g0010 Nicotiana tabacum HOM05D005138 ORTHO05D006318 2.3e-43 179.1 127 68.5
Ah.10g030100 Amaranthus hybridus HOM05D005138 ORTHO05D006318 3.8e-43 178.3 124 71.0
Hund13385 Selenicereus undatus HOM05D005138 ORTHO05D006318 3.8e-43 178.3 135 65.9
Hund15745 Selenicereus undatus HOM05D005138 ORTHO05D006318 1.5e-42 176.4 127 71.7
Psat4g099920 Pisum sativum HOM05D005138 ORTHO05D006318 1.9e-42 176.0 128 67.2
Sabra01G0021400 Salix brachista HOM05D005138 ORTHO05D006318 2.5e-42 175.6 129 66.7
Solyc01g022750.3 Solanum lycopersicum HOM05D005138 ORTHO05D006318 2.5e-42 175.6 127 66.1
Potri.001G029900 Populus trichocarpa HOM05D005138 ORTHO05D006318 3.3e-42 175.3 129 67.4
Medtr8g040150 Medicago truncatula HOM05D005138 ORTHO05D006318 4.2e-42 174.9 128 65.6
Sopen01g016660 Solanum pennellii HOM05D005138 ORTHO05D006318 4.2e-42 174.9 127 66.1
VMungo1127G1184 Vigna mungo HOM05D005138 ORTHO05D006318 4.2e-42 174.9 129 64.3
unitig_899.g15579 Utricularia gibba HOM05D005138 ORTHO05D006318 5.6e-42 174.5 129 67.4
Ca_23972_v3 Cicer arietinum L. HOM05D005138 ORTHO05D006318 9.5e-42 173.7 128 64.8
CAN.G1362.7 Capsicum annuum HOM05D005138 ORTHO05D006318 6.1e-41 171.0 131 64.1
TPR.G8538 Trifolium pratense HOM05D005138 ORTHO05D006318 6.1e-41 171.0 128 64.8
Nitab4.5_0004389g0010 Nicotiana tabacum HOM05D005138 ORTHO05D006318 1.4e-40 169.9 154 55.8
Phvul.011G203300 Phaseolus vulgaris HOM05D005138 ORTHO05D006318 2.3e-40 169.1 135 61.5
Lj3g0022103 Lotus japonicus HOM05D005138 ORTHO05D006318 3.0e-40 168.7 130 63.1
MSTRG.5074 Avicennia marina HOM05D005138 ORTHO05D006318 4.4e-39 164.9 130 65.4
SalBow5G1163 Salvia bowleyana HOM05D005138 ORTHO05D006318 7.5e-39 164.1 169 52.7
ECA248G2587 Erigeron canadensis HOM05D005138 ORTHO05D006318 1.4e-37 159.8 98 78.6
Peaxi162Scf00062g02216 Petunia axillaris HOM05D005138 ORTHO05D006318 3.5e-36 155.2 129 61.2
Actinidia38920 Actinidia chinensis HOM05D005138 ORTHO05D006318 5.0e-35 151.4 127 63.8
Nitab4.5_0000254g0180 Nicotiana tabacum HOM05D005138 ORTHO05D006318 5.0e-35 151.4 127 62.2
Mapoly0055s0110 Marchantia polymorpha HOM05D005138 ORTHO05D006318 3.1e-32 142.1 130 54.6
BcaC01g04057 Brassica carinata HOM05D005138 ORTHO05D006318 2.0e-31 139.4 74 91.9
GSVIVG01036643001 Vitis vinifera HOM05D005138 ORTHO05D006318 3.4e-31 138.7 95 70.5
Pp3c2_3180 Physcomitrium patens HOM05D005138 ORTHO05D006318 2.2e-30 136.0 129 53.5
Pp3c1_37620 Physcomitrium patens HOM05D005138 ORTHO05D006318 2.9e-30 135.6 129 52.7
Peaxi162Scf01042g00115 Petunia axillaris HOM05D005138 ORTHO05D006318 8.3e-30 134.0 126 56.3
PGSC0003DMG400005271 Solanum tuberosum HOM05D005138 ORTHO05D006318 5.4e-29 131.3 93 65.6
CBR_g52457 Chara braunii HOM05D005138 ORTHO05D006318 3.5e-28 128.6 134 49.3
Rhsim09G0131900 Rhododendron simsii HOM05D005138 ORTHO05D006318 6.2e-25 117.9 70 81.4
Lj2A602G38 Lonicera japonica HOM05D005138 ORTHO05D006318 2.0e-23 112.8 69 78.3
Gorai.004G120800 Gossypium raimondii HOM05D005138 ORTHO05D006318 9.8e-23 110.5 70 75.7
COL.COLO4_20706 Corchorus olitorius HOM05D005138 ORTHO05D006318 6.4e-22 107.8 69 75.4
Gohir.A10G188200 Gossypium hirsutum HOM05D005138 ORTHO05D006318 8.3e-22 107.5 70 74.3
SMO364G0517 Selaginella moellendorffii HOM05D005138 ORTHO05D006318 2.4e-21 105.9 118 44.1
ClCG05G026950 Citrullus lanatus HOM05D005138 ORTHO05D006318 1.6e-20 103.2 74 66.2
ClCG00G004230 Citrullus lanatus HOM05D005138 ORTHO05D006318 3.5e-20 102.1 62 82.3
ClCG05G026940 Citrullus lanatus HOM05D005138 ORTHO05D006318 3.5e-20 102.1 62 82.3
Gohir.D03G123000 Gossypium hirsutum HOM05D005138 ORTHO05D006318 3.5e-20 102.1 69 72.5
RcHm_v2.0_Chr1g0325941 Rosa chinensis HOM05D005138 ORTHO05D006318 7.8e-20 100.9 71 69.0
Lalb_Chr19g0132971 Lupinus albus HOM05D005138 ORTHO05D006318 1.0e-19 100.5 77 64.9
Nn7g36804 Nelumbo nucifera HOM05D005138 ORTHO05D006318 8.6e-19 97.4 65 75.4
COL.COLO4_20705 Corchorus olitorius HOM05D005138 ORTHO05D006318 1.9e-18 96.3 62 75.8
MD07G1046900 Malus domestica HOM05D005138 ORTHO05D006318 4.3e-18 95.1 62 74.2
PGSC0003DMG401025557 Solanum tuberosum HOM05D005138 ORTHO05D006318 9.5e-18 94.0 68 61.8
CAN.G575.4 Capsicum annuum HOM05D005138 ORTHO05D006318 2.1e-17 92.8 72 56.9
Lalb_Chr19g0132981 Lupinus albus HOM05D005138 ORTHO05D006318 5.8e-15 84.7 64 64.1
Oeu064133.1 Olea europaea HOM05D005138 ORTHO05D006318 3.7e-14 82.0 53 67.9
AUR62042115 Chenopodium quinoa HOM05D005138 ORTHO05D006318 7.1e-13 77.8 50 72.0
SEGI_36145 Sequoiadendron giganteum HOM05D005138 ORTHO05D006318 9.2e-13 77.4 76 50.0
MCO10G366 Micromonas commoda HOM05D005138 ORTHO05D006318 3.5e-12 75.5 121 36.4
Atru.chr10.1194 Acer truncatum HOM05D005527 ORTHO05D006480 1.3e-11 73.6 75 50.7
Cre12.g555250 Chlamydomonas reinhardtii HOM05D005138 ORTHO05D006318 6.2e-09 64.7 132 28.8
VMungo0464G2031 Vigna mungo HOM05D005138 ORTHO05D011906 4.0e-08 62.0 54 51.9
SEGI_02182 Sequoiadendron giganteum HOM05D005138 ORTHO05D006318 1.2e-07 60.5 76 36.8
BcaC04g23227 Brassica carinata HOM05D004238 ORTHO05D004934 3.4e-07 58.9 28 96.4
C08p35620 Brassica napus HOM05D004238 ORTHO05D004934 3.4e-07 58.9 28 96.4
BolC9t53984H Brassica oleracea HOM05D004238 ORTHO05D004934 3.4e-07 58.9 28 96.4
BcaC08g45100 Brassica carinata HOM05D004238 ORTHO05D004934 1.7e-06 56.6 28 89.3
BolC6t37880H Brassica oleracea HOM05D004238 ORTHO05D004934 1.7e-06 56.6 28 89.3
PRCOL_00003180 Prasinoderma coloniale HOM05D000737 ORTHO05D000581 4.9e-06 55.1 103 29.1
PGSC0003DMG400003395 Solanum tuberosum HOM05D005138 ORTHO05D006318 8.4e-06 54.3 69 39.1


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