Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG3G6010 Aethionema arabicum HOM05D001579 ORTHO05D003470 3.4e-83 311.6 156 100.0
Aa31LG7G14810 Aethionema arabicum HOM05D001579 ORTHO05D003470 1.4e-65 253.1 144 88.2
AL7G11270 Arabidopsis lyrata HOM05D001579 ORTHO05D003470 2.5e-62 242.3 140 85.7
THA.LOC104824827 Tarenaya hassleriana HOM05D001579 ORTHO05D003470 1.3e-61 240.0 141 82.3
AT4G39280 Arabidopsis thaliana HOM05D001579 ORTHO05D003470 2.1e-61 239.2 140 84.3
CARHR247410 Cardamine hirsuta HOM05D001579 ORTHO05D003470 6.2e-61 237.7 140 84.3
Carub.0007s0120 Capsella rubella HOM05D001579 ORTHO05D003470 1.4e-60 236.5 140 81.4
THA.LOC104804143 Tarenaya hassleriana HOM05D001579 ORTHO05D003470 4.0e-60 235.0 141 80.9
Ciclev10028310m.g Citrus clementina HOM05D001579 ORTHO05D003470 5.3e-60 234.6 141 82.3
Gohir.D04G167200 Gossypium hirsutum HOM05D001579 ORTHO05D003470 5.3e-60 234.6 141 81.6
COL.COLO4_25932 Corchorus olitorius HOM05D001579 ORTHO05D003470 1.2e-59 233.4 141 82.3
Gorai.012G155500 Gossypium raimondii HOM05D001579 ORTHO05D003470 1.2e-59 233.4 141 80.9
Gohir.A04G130900 Gossypium hirsutum HOM05D001579 ORTHO05D003470 2.6e-59 232.3 141 80.9
Thecc.02G085100 Theobroma cacao HOM05D001579 ORTHO05D003470 2.6e-59 232.3 141 79.4
Duzib132G0542 Durio zibethinus HOM05D001579 ORTHO05D003470 7.6e-59 230.7 141 78.7
Cpa.g.sc62.152 Carica papaya HOM05D001579 ORTHO05D003470 1.3e-58 229.9 145 77.2
Atru.chr5.3017 Acer truncatum HOM05D001579 ORTHO05D003470 2.9e-58 228.8 141 78.7
TWI79G0010 Tripterygium wilfordii HOM05D001579 ORTHO05D003470 1.6e-56 223.0 141 76.6
Manes.17G101200 Manihot esculenta HOM05D001579 ORTHO05D003470 2.1e-56 222.6 141 75.9
Duzib052G0487 Durio zibethinus HOM05D001579 ORTHO05D003470 1.9e-54 216.1 134 78.4
Carub.0004s0076 Capsella rubella HOM05D001579 ORTHO05D003470 1.5e-51 206.5 144 72.9
Eucgr.D00245 Eucalyptus grandis HOM05D001579 ORTHO05D003470 1.5e-51 206.5 141 70.9
Prupe.8G096800 Prunus persica HOM05D001579 ORTHO05D003470 2.6e-51 205.7 142 71.8
Sabra04G0102800 Salix brachista HOM05D001579 ORTHO05D003470 5.8e-51 204.5 140 72.1
Glyma.12G043200 Glycine max HOM05D001579 ORTHO05D003470 6.4e-50 201.1 141 70.2
CANSAT80G0427 Cannabis sativa HOM05D001579 ORTHO05D003470 1.1e-49 200.3 141 70.2
Glyma.11G117800 Glycine max HOM05D001579 ORTHO05D003470 1.9e-49 199.5 141 68.8
TPR.G19411 Trifolium pratense HOM05D001579 ORTHO05D003470 1.9e-49 199.5 141 70.2
Potri.004G155000 Populus trichocarpa HOM05D001579 ORTHO05D003470 2.4e-49 199.1 143 69.2
TPR.G23438 Trifolium pratense HOM05D001579 ORTHO05D003470 3.2e-49 198.7 141 70.2
Cfa005003 Carpinus fangiana HOM05D001579 ORTHO05D003470 7.1e-49 197.6 140 66.4
Haze_02385 Corylus avellana HOM05D001579 ORTHO05D003470 9.3e-49 197.2 140 67.9
BraA09t41189Z Brassica rapa HOM05D001579 ORTHO05D003470 1.6e-48 196.4 145 71.0
arahy.Tifrunner.gnm1.ann1.D5Q7RU Arachis hypogaea HOM05D001579 ORTHO05D003470 2.1e-48 196.1 141 69.5
arahy.Tifrunner.gnm1.ann1.IB6GCN Arachis hypogaea HOM05D001579 ORTHO05D003470 2.1e-48 196.1 141 69.5
A09p57990 Brassica napus HOM05D001579 ORTHO05D003470 2.1e-48 196.1 145 71.7
VMungo1127G1806 Vigna mungo HOM05D001579 ORTHO05D003470 2.1e-48 196.1 141 67.4
Phvul.011G045200 Phaseolus vulgaris HOM05D001579 ORTHO05D003470 3.5e-48 195.3 141 66.7
Potri.009G116100 Populus trichocarpa HOM05D001579 ORTHO05D003470 4.6e-48 194.9 140 68.6
Medtr4g070040 Medicago truncatula HOM05D001579 ORTHO05D003470 6.0e-48 194.5 145 66.9
AL4G10950 Arabidopsis lyrata HOM05D001579 ORTHO05D003470 7.9e-48 194.1 152 67.8
BcaC07g41119 Brassica carinata HOM05D001579 ORTHO05D003470 7.9e-48 194.1 145 71.0
MELO3C013873.2 Cucumis melo HOM05D001579 ORTHO05D003470 7.9e-48 194.1 142 67.6
Lalb_Chr01g0002541 Lupinus albus HOM05D001579 ORTHO05D003470 7.9e-48 194.1 141 67.4
MD10G1076200 Malus domestica HOM05D001579 ORTHO05D003470 1.0e-47 193.7 142 68.3
CsaV3_3G002020 Cucumis sativus L. HOM05D001579 ORTHO05D003470 1.3e-47 193.4 142 67.6
C09p46380 Brassica napus HOM05D001579 ORTHO05D003470 1.8e-47 193.0 144 68.1
Ca_01102_v3 Cicer arietinum L. HOM05D001579 ORTHO05D003470 2.3e-47 192.6 141 66.7
Lj3g0013700 Lotus japonicus HOM05D001579 ORTHO05D003470 2.3e-47 192.6 141 66.0
Sed0021732 Sechium edule HOM05D001579 ORTHO05D003470 2.3e-47 192.6 142 67.6
Psat7g141360 Pisum sativum HOM05D001579 ORTHO05D003470 3.0e-47 192.2 141 67.4
Lj1g0020223 Lotus japonicus HOM05D001579 ORTHO05D003470 6.7e-47 191.0 141 65.2
BcaB08g35003 Brassica carinata HOM05D001579 ORTHO05D003470 8.7e-47 190.7 145 68.3
MD05G1066200 Malus domestica HOM05D001579 ORTHO05D003470 1.1e-46 190.3 142 66.2
Hund14641 Selenicereus undatus HOM05D001579 ORTHO05D003470 1.5e-46 189.9 141 67.4
BolC8t51687H Brassica oleracea HOM05D001579 ORTHO05D003470 1.9e-46 189.5 146 70.5
Cc02_g25820 Coffea canephora HOM05D001579 ORTHO05D003470 1.9e-46 189.5 142 66.9
C08p41200 Brassica napus HOM05D001579 ORTHO05D003470 2.5e-46 189.1 146 69.9
Lalb_Chr03g0025691 Lupinus albus HOM05D001579 ORTHO05D003470 2.5e-46 189.1 141 64.5
GSVIVG01031967001 Vitis vinifera HOM05D001579 ORTHO05D003470 5.6e-46 188.0 142 68.3
Actinidia27894 Actinidia chinensis HOM05D001579 ORTHO05D003470 2.1e-45 186.0 142 66.2
Migut.B00751 Erythranthe guttata HOM05D001579 ORTHO05D003470 2.8e-45 185.7 142 64.1
BcaC03g13561 Brassica carinata HOM05D001579 ORTHO05D017611 3.7e-45 185.3 139 68.3
Oeu041647.1 Olea europaea HOM05D001579 ORTHO05D003470 3.7e-45 185.3 140 64.3
Nitab4.5_0004172g0030 Nicotiana tabacum HOM05D001579 ORTHO05D003470 4.8e-45 184.9 142 64.8
HanXRQChr14g0437911 Helianthus annuus HOM05D001579 ORTHO05D003470 6.2e-45 184.5 141 67.4
Nn1g01939 Nelumbo nucifera HOM05D001579 ORTHO05D003470 6.2e-45 184.5 144 67.4
Nitab4.5_0000974g0080 Nicotiana tabacum HOM05D001579 ORTHO05D003470 6.2e-45 184.5 142 64.8
TAR376G1017 Trochodendron aralioides HOM05D001579 ORTHO05D003470 6.2e-45 184.5 142 62.7
TAR628G1064 Trochodendron aralioides HOM05D001579 ORTHO05D003470 8.2e-45 184.1 142 62.0
Actinidia00524 Actinidia chinensis HOM05D001579 ORTHO05D003470 1.1e-44 183.7 142 64.8
QL11p043704 Quercus lobata HOM05D001579 ORTHO05D003470 1.1e-44 183.7 145 60.7
ClCG10G001880 Citrullus lanatus HOM05D001579 ORTHO05D003470 4.0e-44 181.8 159 61.0
Nitab4.5_0011688g0020 Nicotiana tabacum HOM05D001579 ORTHO05D003470 5.3e-44 181.4 142 63.4
MBI01_g34891_MAGBIO Magnolia biondii HOM05D001579 ORTHO05D003470 9.0e-44 180.6 141 65.2
EL10Ac3g05071 Beta vulgaris HOM05D001579 ORTHO05D003470 1.2e-43 180.3 141 64.5
CAN.G1412.7 Capsicum annuum HOM05D001579 ORTHO05D003470 1.2e-43 180.3 146 63.0
CDE04G1236 Ceratophyllum demersum HOM05D001579 ORTHO05D003470 1.2e-43 180.3 142 64.1
HanXRQChr14g0446281 Helianthus annuus HOM05D001579 ORTHO05D003470 1.2e-43 180.3 141 66.0
Nitab4.5_0000308g0090 Nicotiana tabacum HOM05D001579 ORTHO05D003470 1.2e-43 180.3 142 62.7
CSS0049673 Camellia sinensis var. sinensis HOM05D001579 ORTHO05D003470 1.5e-43 179.9 142 61.3
CiPaw.05G064600 Carya illinoinensis HOM05D001579 ORTHO05D003470 2.0e-43 179.5 141 66.0
Solyc02g090860.3 Solanum lycopersicum HOM05D001579 ORTHO05D003470 2.0e-43 179.5 142 63.4
ATR0051G048 Amborella trichopoda HOM05D001579 ORTHO05D003470 2.6e-43 179.1 142 64.8
AUR62034498 Chenopodium quinoa HOM05D001579 ORTHO05D003470 2.6e-43 179.1 142 64.8
Sopen02g035480 Solanum pennellii HOM05D001579 ORTHO05D003470 2.6e-43 179.1 142 63.4
Duzib248G0143 Durio zibethinus HOM05D001579 ORTHO05D003470 3.4e-43 178.7 126 70.6
Ah.12g056180 Amaranthus hybridus HOM05D001579 ORTHO05D003470 4.5e-43 178.3 141 61.7
CSS0031219 Camellia sinensis var. sinensis HOM05D001579 ORTHO05D003470 5.8e-43 177.9 141 62.4
Solyc10g007060.4 Solanum lycopersicum HOM05D001579 ORTHO05D003470 5.8e-43 177.9 142 62.0
Sopen10g002960 Solanum pennellii HOM05D001579 ORTHO05D003470 5.8e-43 177.9 142 62.0
Ah.02g117280 Amaranthus hybridus HOM05D001579 ORTHO05D003470 1.3e-42 176.8 141 61.0
Sc13g0008990 Simmondsia chinensis HOM05D001579 ORTHO05D003470 3.8e-42 175.3 142 62.7
PGSC0003DMG400025010 Solanum tuberosum HOM05D001579 ORTHO05D003470 4.9e-42 174.9 142 61.3
PGSC0003DMG400004021 Solanum tuberosum HOM05D001579 ORTHO05D003470 8.4e-42 174.1 142 62.0
ECA240G1027 Erigeron canadensis HOM05D001579 ORTHO05D003470 1.4e-41 173.3 141 64.5
Lj2C359T3 Lonicera japonica HOM05D001579 ORTHO05D003470 2.5e-41 172.6 142 62.7
MSTRG.16808 Avicennia marina HOM05D001579 ORTHO05D003470 4.2e-41 171.8 154 58.4
C02p09550 Brassica napus HOM05D001579 ORTHO05D017611 7.1e-41 171.0 126 69.0
Oeu015994.1 Olea europaea HOM05D001579 ORTHO05D003470 9.3e-41 170.6 155 58.1
BcaC02g08772 Brassica carinata HOM05D001579 ORTHO05D003470 1.2e-40 170.2 141 63.1
A10p12820 Brassica napus HOM05D001579 ORTHO05D003470 1.2e-40 170.2 162 58.0
C04p50830 Brassica napus HOM05D001579 ORTHO05D003470 1.2e-40 170.2 141 63.1
BolC4t26677H Brassica oleracea HOM05D001579 ORTHO05D003470 1.2e-40 170.2 141 63.1
BraA10t43375Z Brassica rapa HOM05D001579 ORTHO05D003470 1.2e-40 170.2 162 58.0
A04p16340 Brassica napus HOM05D001579 ORTHO05D003470 1.6e-40 169.9 141 63.8
BcaB06g27782 Brassica carinata HOM05D001579 ORTHO05D003470 2.7e-40 169.1 141 63.1
AUR62034190 Chenopodium quinoa HOM05D001579 ORTHO05D003470 2.7e-40 169.1 154 59.1
Hma1.2p1_0633F.1_g192550 Hydrangea macrophylla HOM05D001579 ORTHO05D003470 4.6e-40 168.3 143 60.1
BraA04t17272Z Brassica rapa HOM05D001579 ORTHO05D003470 6.0e-40 167.9 141 63.1
PGR042G0613 Punica granatum HOM05D001579 ORTHO05D003470 6.0e-40 167.9 144 59.0
BcaB03g12963 Brassica carinata HOM05D001579 ORTHO05D003470 1.0e-39 167.2 143 62.9
Hma1.2p1_1375F.1_g279070 Hydrangea macrophylla HOM05D001579 ORTHO05D003470 1.3e-39 166.8 142 59.9
BraA01t04658Z Brassica rapa HOM05D001579 ORTHO05D017611 3.9e-39 165.2 125 68.8
AL7G31990 Arabidopsis lyrata HOM05D001579 ORTHO05D003470 1.1e-38 163.7 143 60.8
CSS0013099 Camellia sinensis var. sinensis HOM05D001579 ORTHO05D003470 4.3e-38 161.8 131 60.3
A10p05500 Brassica napus HOM05D001579 ORTHO05D017611 9.7e-38 160.6 125 68.0
RcHm_v2.0_Chr6g0264251 Rosa chinensis HOM05D001579 ORTHO05D003470 2.8e-37 159.1 145 58.6
FvH4_3g28200 Fragaria vesca HOM05D001579 ORTHO05D003470 3.7e-37 158.7 148 56.1
FAN11G3917 Fragaria x ananassa HOM05D001579 ORTHO05D003470 3.7e-37 158.7 148 56.1
FAN21G0623 Fragaria x ananassa HOM05D001579 ORTHO05D003470 6.3e-37 157.9 148 56.1
FAN16G2055 Fragaria x ananassa HOM05D001579 ORTHO05D003470 1.4e-36 156.8 148 56.1
CAN.G1298.23 Capsicum annuum HOM05D001579 ORTHO05D003470 1.8e-36 156.4 146 56.8
Lj7A253G28 Lonicera japonica HOM05D001579 ORTHO05D003470 1.8e-36 156.4 183 51.9
Rhsim11G0177200 Rhododendron simsii HOM05D001579 ORTHO05D003470 2.4e-36 156.0 186 47.8
FAN16G0460 Fragaria x ananassa HOM05D001579 ORTHO05D003470 3.1e-36 155.6 148 55.4
A03p60490 Brassica napus HOM05D001579 ORTHO05D017611 9.0e-36 154.1 118 66.9
FAN20G1104 Fragaria x ananassa HOM05D001579 ORTHO05D003470 1.2e-35 153.7 148 57.4
FAN27G2756 Fragaria x ananassa HOM05D001579 ORTHO05D003470 1.5e-35 153.3 148 57.4
Carub.0005s1088 Capsella rubella HOM05D001579 ORTHO05D003470 2.6e-35 152.5 139 58.3
BcaB01g00883 Brassica carinata HOM05D001579 ORTHO05D003470 7.7e-35 151.0 147 56.5
Peaxi162Scf00016g00732 Petunia axillaris HOM05D001579 ORTHO05D003470 7.7e-35 151.0 142 56.3
FAN15G0032 Fragaria x ananassa HOM05D001579 ORTHO05D003470 1.3e-34 150.2 148 56.1
AUR62003165 Chenopodium quinoa HOM05D001579 ORTHO05D003470 1.7e-34 149.8 172 53.5
Thhalv10007412m.g Eutrema salsugineum HOM05D001579 ORTHO05D003470 1.7e-34 149.8 148 54.7
RcHm_v2.0_Chr7g0204471 Rosa chinensis HOM05D001579 ORTHO05D003470 2.9e-34 149.1 146 54.8
FvH4_2g08790 Fragaria vesca HOM05D001579 ORTHO05D003470 5.0e-34 148.3 148 55.4
FAN24G0111 Fragaria x ananassa HOM05D001579 ORTHO05D003470 5.0e-34 148.3 148 55.4
DCAR_006199 Daucus carota HOM05D001579 ORTHO05D003470 1.1e-33 147.1 146 53.4
Lj7A248G13 Lonicera japonica HOM05D001579 ORTHO05D003470 5.5e-33 144.8 209 45.0
AUR62007985 Chenopodium quinoa HOM05D001579 ORTHO05D003470 7.9e-32 141.0 196 45.9
SMO119G0093 Selaginella moellendorffii HOM05D001579 ORTHO05D003470 2.3e-31 139.4 145 50.3
Aqoxy7G01384 Aquilegia oxysepala HOM05D001579 ORTHO05D003470 6.7e-31 137.9 140 50.7
BcaB03g15109 Brassica carinata HOM05D001579 ORTHO05D003470 1.5e-30 136.7 145 57.9
SalBow6G0592 Salvia bowleyana HOM05D001579 ORTHO05D003470 4.3e-30 135.2 142 50.0
PSO447G0328 Papaver somniferum HOM05D001579 ORTHO05D003470 2.2e-29 132.9 143 49.7
SalBow6G1678 Salvia bowleyana HOM05D001579 ORTHO05D003470 4.8e-29 131.7 153 47.1
vmacro11112 Vaccinium macrocarpon HOM05D001579 ORTHO05D003470 4.8e-29 131.7 111 63.1
A09p15640 Brassica napus HOM05D001579 ORTHO05D017611 1.8e-28 129.8 125 58.4
BraA09t37204Z Brassica rapa HOM05D001579 ORTHO05D003470 5.3e-28 128.3 125 57.6
PSO478G3633 Papaver somniferum HOM05D001579 ORTHO05D003470 6.9e-28 127.9 142 48.6
CDE06G0853 Ceratophyllum demersum HOM05D001579 ORTHO05D003470 2.0e-27 126.3 95 67.4
RcHm_v2.0_Chr6g0259031 Rosa chinensis HOM05D001579 ORTHO05D003470 2.0e-27 126.3 123 53.7
BraA10t42813Z Brassica rapa HOM05D001579 ORTHO05D017611 6.5e-26 121.3 158 48.7
AagrBONN_evm.TU.Sc2ySwM_344.2010 Anthoceros agrestis HOM05D001579 ORTHO05D003470 8.5e-26 120.9 146 47.9
Pp3c2_16770 Physcomitrium patens HOM05D001579 ORTHO05D003470 1.9e-25 119.8 140 47.1
BcaC08g46255 Brassica carinata HOM05D001579 ORTHO05D003470 3.2e-25 119.0 111 64.0
BcaC08g46253 Brassica carinata HOM05D001579 ORTHO05D003470 7.9e-24 114.4 111 64.0
CARHR112750 Cardamine hirsuta HOM05D001579 ORTHO05D003470 5.1e-23 111.7 100 61.0
unitig_0.g66 Utricularia gibba HOM05D001579 ORTHO05D003470 1.1e-22 110.5 98 59.2
Os10g0400800 Oryza sativa ssp. japonica HOM05D001579 ORTHO05D003470 2.0e-22 109.8 144 45.1
Mapoly0012s0145 Marchantia polymorpha HOM05D001579 ORTHO05D003470 3.3e-22 109.0 141 41.8
SGA_v2.0_scaffold58G20534 Striga asiatica HOM05D001579 ORTHO05D003470 4.4e-22 108.6 132 43.9
Sp4g00870 Schrenkiella parvula HOM05D001579 ORTHO05D003470 2.2e-21 106.3 77 70.1
Rhsim05G0074300 Rhododendron simsii HOM05D001579 ORTHO05D003470 1.1e-20 104.0 175 41.7
CBR_g23301 Chara braunii HOM05D001579 ORTHO05D003470 4.1e-20 102.1 135 42.2
BNapus_Darmor_BZH_scaffold_97p00330 Brassica napus HOM05D001579 ORTHO05D017611 5.3e-20 101.7 99 57.6
Glyma.17G231300 Glycine max HOM05D001579 ORTHO05D003470 5.9e-19 98.2 76 59.2
HPP92_002580 Vanilla planifolia HOM05D001579 ORTHO05D003470 1.3e-18 97.1 127 45.7
A04p16550 Brassica napus HOM05D001264 ORTHO05D017611 1.7e-18 96.7 110 55.5
Zm00001eb255720 Zea mays HOM05D001579 ORTHO05D003470 2.2e-18 96.3 144 40.3
Cre09.g389430 Chlamydomonas reinhardtii HOM05D001579 ORTHO05D003470 1.9e-17 93.2 147 39.5
SEGI_12575 Sequoiadendron giganteum HOM05D001579 ORTHO05D003470 1.9e-17 93.2 73 65.8
Hma1.2p1_0052F.1_g030760 Hydrangea macrophylla HOM05D001579 ORTHO05D003470 9.4e-17 90.9 120 45.8
SHI02914 Sapria himalayana HOM05D001579 ORTHO05D003470 4.7e-16 88.6 69 56.5
SHI02915 Sapria himalayana HOM05D001579 ORTHO05D003470 1.1e-14 84.0 53 69.8
PRCOL_00000627 Prasinoderma coloniale HOM05D001579 ORTHO05D003470 2.2e-13 79.7 144 36.1
Hma1.2p1_0681F.1_g202440 Hydrangea macrophylla HOM05D001579 ORTHO05D003470 1.1e-12 77.4 151 37.1
MCO10G005 Micromonas commoda HOM05D001579 ORTHO05D003470 9.1e-12 74.3 139 36.0
Hund11566 Selenicereus undatus HOM05D001579 ORTHO05D003470 5.9e-11 71.6 49 61.2
BcaC01g00633 Brassica carinata HOM05D001579 ORTHO05D003470 2.7e-08 62.8 41 70.7
SGA_v2.0_scaffold335G49103 Striga asiatica HOM05D001579 ORTHO05D003470 6.1e-08 61.6 44 61.4
Hma1.2p1_3239F.1_g334310 Hydrangea macrophylla HOM05D001579 ORTHO05D003470 8.0e-08 61.2 81 42.0


User provided reference genes

Program Settings