Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG3G600 Aethionema arabicum HOM05D006529 ORTHO05D008380 4.0e-125 451.4 226 100.0
CARHR233790 Cardamine hirsuta HOM05D006529 ORTHO05D008380 1.0e-59 234.2 164 70.1
Carub.0007s1471 Capsella rubella HOM05D006529 ORTHO05D008380 1.3e-59 233.8 164 70.1
AL7G26720 Arabidopsis lyrata HOM05D006529 ORTHO05D008380 6.5e-59 231.5 164 70.1
Sp7g24240 Schrenkiella parvula HOM05D006529 ORTHO05D008380 4.2e-58 228.8 162 71.0
Thhalv10026289m.g Eutrema salsugineum HOM05D006529 ORTHO05D008380 5.5e-58 228.4 191 62.3
AT4G26240 Arabidopsis thaliana HOM05D006529 ORTHO05D008380 3.5e-57 225.7 164 68.3
A03p56550 Brassica napus HOM05D006529 ORTHO05D008380 1.5e-55 220.3 166 66.9
C07p54750 Brassica napus HOM05D006529 ORTHO05D008380 8.2e-54 214.5 166 65.7
BolC7t45964H Brassica oleracea HOM05D006529 ORTHO05D008380 8.2e-54 214.5 166 65.7
BcaC06g32765 Brassica carinata HOM05D006529 ORTHO05D008380 1.1e-53 214.2 167 64.1
THA.LOC104813489 Tarenaya hassleriana HOM05D006529 ORTHO05D008380 2.4e-53 213.0 163 63.2
BraA03t14725Z Brassica rapa HOM05D006529 ORTHO05D008380 6.9e-53 211.5 167 64.7
Cfa003138 Carpinus fangiana HOM05D006529 ORTHO05D008380 2.0e-44 183.3 163 57.1
TAR624G0297 Trochodendron aralioides HOM05D006529 ORTHO05D008380 3.8e-43 179.1 164 55.5
MD02G1072300 Malus domestica HOM05D006529 ORTHO05D008380 3.2e-42 176.0 164 56.1
Gohir.D05G029600 Gossypium hirsutum HOM05D006529 ORTHO05D008380 7.2e-42 174.9 163 55.8
Gorai.009G029800 Gossypium raimondii HOM05D006529 ORTHO05D008380 7.2e-42 174.9 163 55.8
Prupe.7G215100 Prunus persica HOM05D006529 ORTHO05D008380 7.2e-42 174.9 198 51.0
Gohir.A05G027800 Gossypium hirsutum HOM05D006529 ORTHO05D008380 2.1e-41 173.3 163 55.2
QL02p063543 Quercus lobata HOM05D006529 ORTHO05D008380 2.7e-41 172.9 188 50.5
Duzib150G0994 Durio zibethinus HOM05D006529 ORTHO05D008380 4.6e-41 172.2 163 54.0
TWI63G1011 Tripterygium wilfordii HOM05D006529 ORTHO05D008380 6.1e-41 171.8 163 54.6
COL.COLO4_18251 Corchorus olitorius HOM05D006529 ORTHO05D008380 1.4e-40 170.6 176 52.8
arahy.Tifrunner.gnm1.ann1.YG2MQU Arachis hypogaea HOM05D006529 ORTHO05D008380 1.8e-40 170.2 163 52.8
GSVIVG01015253001 Vitis vinifera HOM05D006529 ORTHO05D008380 1.8e-40 170.2 164 56.1
Lalb_Chr05g0223501 Lupinus albus HOM05D006529 ORTHO05D008380 2.3e-40 169.9 163 54.6
PGR142G1231 Punica granatum HOM05D006529 ORTHO05D008380 2.3e-40 169.9 166 54.2
Thecc.09G094900 Theobroma cacao HOM05D006529 ORTHO05D008380 2.3e-40 169.9 170 54.1
arahy.Tifrunner.gnm1.ann1.HB8I5Y Arachis hypogaea HOM05D006529 ORTHO05D008380 1.1e-39 167.5 163 52.1
FvH4_1g06740 Fragaria vesca HOM05D006529 ORTHO05D008380 1.1e-39 167.5 195 48.7
FAN19G1593 Fragaria x ananassa HOM05D006529 ORTHO05D008380 1.1e-39 167.5 195 48.7
RcHm_v2.0_Chr2g0092481 Rosa chinensis HOM05D006529 ORTHO05D008380 1.5e-39 167.2 195 49.2
CiPaw.04G153200 Carya illinoinensis HOM05D006529 ORTHO05D008380 2.0e-39 166.8 190 48.4
FAN23G2505 Fragaria x ananassa HOM05D006529 ORTHO05D008380 2.0e-39 166.8 195 48.2
Manes.16G105400 Manihot esculenta HOM05D006529 ORTHO05D008380 2.5e-39 166.4 186 49.5
Ciclev10009577m.g Citrus clementina HOM05D006529 ORTHO05D008380 4.3e-39 165.6 160 56.2
MD15G1202100 Malus domestica HOM05D006529 ORTHO05D008380 4.3e-39 165.6 197 48.7
Potri.006G153800 Populus trichocarpa HOM05D006529 ORTHO05D008380 4.3e-39 165.6 163 54.6
Atru.chr7.1518 Acer truncatum HOM05D006529 ORTHO05D008380 5.7e-39 165.2 164 53.7
CSS0016193 Camellia sinensis var. sinensis HOM05D006529 ORTHO05D008380 9.7e-39 164.5 165 52.1
Ca_17386_v3 Cicer arietinum L. HOM05D006529 ORTHO05D008380 2.2e-38 163.3 194 50.5
Glyma.05G223900 Glycine max HOM05D006529 ORTHO05D008380 4.8e-38 162.2 163 54.0
Nitab4.5_0004011g0030 Nicotiana tabacum HOM05D006529 ORTHO05D008380 6.3e-38 161.8 167 52.7
CAN.G142.8 Capsicum annuum HOM05D006529 ORTHO05D008380 8.2e-38 161.4 190 47.4
Eucgr.C00932 Eucalyptus grandis HOM05D006529 ORTHO05D008380 8.2e-38 161.4 170 50.0
FAN14G0658 Fragaria x ananassa HOM05D006529 ORTHO05D008380 1.1e-37 161.0 184 48.4
Glyma.08G031000 Glycine max HOM05D006529 ORTHO05D008380 1.1e-37 161.0 163 54.0
ClCG03G015880 Citrullus lanatus HOM05D006529 ORTHO05D008380 1.4e-37 160.6 164 54.3
Lj4g0018594 Lotus japonicus HOM05D006529 ORTHO05D008380 1.4e-37 160.6 163 52.8
Dinv42286 Davidia involucrata HOM05D006529 ORTHO05D008380 2.4e-37 159.8 175 49.1
ECA240G3812 Erigeron canadensis HOM05D006529 ORTHO05D008380 5.3e-37 158.7 171 49.7
Haze_25864 Corylus avellana HOM05D006529 ORTHO05D008380 9.1e-37 157.9 163 50.3
Medtr8g101990 Medicago truncatula HOM05D006529 ORTHO05D008380 9.1e-37 157.9 163 53.4
Hund07265 Selenicereus undatus HOM05D006529 ORTHO05D008380 9.1e-37 157.9 165 50.3
AUR62000487 Chenopodium quinoa HOM05D006529 ORTHO05D008380 1.5e-36 157.1 164 50.0
AUR62006831 Chenopodium quinoa HOM05D006529 ORTHO05D008380 2.6e-36 156.4 164 50.0
Psat7g019320 Pisum sativum HOM05D006529 ORTHO05D008380 2.6e-36 156.4 163 51.5
Dinv36729 Davidia involucrata HOM05D006529 ORTHO05D008380 3.4e-36 156.0 166 48.8
Cc06_g10920 Coffea canephora HOM05D006529 ORTHO05D008380 5.9e-36 155.2 163 52.8
Nn8g38953 Nelumbo nucifera HOM05D006529 ORTHO05D008380 7.7e-36 154.8 189 47.6
Lj7C671T1 Lonicera japonica HOM05D006529 ORTHO05D008380 1.0e-35 154.5 177 47.5
HanXRQChr09g0238511 Helianthus annuus HOM05D006529 ORTHO05D008380 1.3e-35 154.1 163 49.1
Actinidia29893 Actinidia chinensis HOM05D006529 ORTHO05D008380 2.9e-35 152.9 165 49.7
Sc18g0001790 Simmondsia chinensis HOM05D006529 ORTHO05D008380 2.9e-35 152.9 165 53.9
VMungo0251G0255 Vigna mungo HOM05D006529 ORTHO05D008380 3.8e-35 152.5 194 46.4
Nn6g35394 Nelumbo nucifera HOM05D006529 ORTHO05D008380 8.5e-35 151.4 167 48.5
vmacro06269 Vaccinium macrocarpon HOM05D006529 ORTHO05D008380 1.4e-34 150.6 168 49.4
Ah.06g190810 Amaranthus hybridus HOM05D006529 ORTHO05D008380 3.2e-34 149.4 165 48.5
Sed0011062 Sechium edule HOM05D006529 ORTHO05D008380 3.2e-34 149.4 164 48.8
Oeu052123.2 Olea europaea HOM05D006529 ORTHO05D008380 5.5e-34 148.7 171 46.2
CDE05G3131 Ceratophyllum demersum HOM05D006529 ORTHO05D008380 1.6e-33 147.1 165 46.1
Aqoxy199s004 Aquilegia oxysepala HOM05D006529 ORTHO05D008380 6.1e-33 145.2 164 48.8
Aqoxy7G01329 Aquilegia oxysepala HOM05D006529 ORTHO05D008380 6.1e-33 145.2 164 48.8
CANSAT56G2962 Cannabis sativa HOM05D006529 ORTHO05D008380 7.9e-33 144.8 174 47.7
Phvul.002G305700 Phaseolus vulgaris HOM05D006529 ORTHO05D008380 1.4e-32 144.1 163 49.7
DCAR_012008 Daucus carota HOM05D006529 ORTHO05D008380 2.3e-32 143.3 173 43.9
CsaV3_1G040070 Cucumis sativus L. HOM05D006529 ORTHO05D008380 3.9e-32 142.5 181 45.9
Migut.K00572 Erythranthe guttata HOM05D006529 ORTHO05D008380 1.5e-31 140.6 165 48.5
MSTRG.10586 Avicennia marina HOM05D006529 ORTHO05D008380 2.0e-31 140.2 164 47.6
SalBow1G6632 Salvia bowleyana HOM05D006529 ORTHO05D008380 2.0e-31 140.2 173 46.8
SGA_v2.0_scaffold210G42089 Striga asiatica HOM05D006529 ORTHO05D008380 2.6e-31 139.8 164 48.2
PSO063G6648 Papaver somniferum HOM05D006529 ORTHO05D008380 2.8e-30 136.3 161 44.7
CSS0046887 Camellia sinensis var. sinensis HOM05D006529 ORTHO05D008380 6.3e-30 135.2 166 48.8
PSO832G0687 Papaver somniferum HOM05D006529 ORTHO05D008380 8.2e-30 134.8 161 44.7
Zm00001eb356780 Zea mays HOM05D006529 ORTHO05D008380 3.5e-28 129.4 136 50.7
Cpa.g.sc78.59 Carica papaya HOM05D006529 ORTHO05D008380 1.1e-26 124.4 200 41.0
Os01g0559300 Oryza sativa ssp. japonica HOM05D006529 ORTHO05D008380 1.6e-25 120.6 139 48.9
MELO3C015437.2 Cucumis melo HOM05D006529 ORTHO05D008380 4.7e-25 119.0 164 43.9
CsaV3_UNG050340 Cucumis sativus L. HOM05D006529 ORTHO05D008380 4.0e-24 115.9 98 55.1
Lsat_1_v5_gn_7_38121 Lactuca sativa HOM05D006529 ORTHO05D008380 8.8e-24 114.8 123 48.0
TPR.G17281 Trifolium pratense HOM05D006529 ORTHO05D008380 2.4e-21 106.7 139 43.2
SHI02792 Sapria himalayana HOM05D006529 ORTHO05D008380 1.2e-20 104.4 135 43.0
Nitab4.5_0009098g0020 Nicotiana tabacum HOM05D006529 ORTHO05D008380 1.6e-20 104.0 102 57.8
Peaxi162Scf00883g01013 Petunia axillaris HOM05D006529 ORTHO05D008380 2.7e-20 103.2 170 37.1
Sabra06G0122000 Salix brachista HOM05D006529 ORTHO05D008380 2.2e-19 100.1 114 52.6
CANSAT56G3512 Cannabis sativa HOM05D006529 ORTHO05D008380 2.9e-19 99.8 174 37.4
FAN26G1500 Fragaria x ananassa HOM05D006529 ORTHO05D008380 3.6e-17 92.8 201 36.3
FAN27G1398 Fragaria x ananassa HOM05D006529 ORTHO05D008380 1.7e-14 84.0 73 61.6
HanXRQChr03g0061031 Helianthus annuus HOM05D006529 ORTHO05D008380 2.0e-12 77.0 89 50.6
SalBow1G6389 Salvia bowleyana HOM05D006529 ORTHO05D008380 4.2e-10 69.3 66 43.9
FAN26G3434 Fragaria x ananassa HOM05D006529 ORTHO05D008380 1.8e-08 63.9 61 44.3
Lalb_Chr09g0331711 Lupinus albus HOM05D006529 ORTHO05D008380 5.2e-08 62.4 45 66.7
PGSC0003DMG400015618 Solanum tuberosum HOM05D006529 ORTHO05D008380 2.6e-07 60.1 74 51.4
C01p22040 Brassica napus HOM05D006529 ORTHO05D008380 4.4e-07 59.3 42 61.9
BolC1t02133H Brassica oleracea HOM05D006529 ORTHO05D008380 4.4e-07 59.3 42 61.9
RcHm_v2.0_Chr7g0226351 Rosa chinensis HOM05D006529 ORTHO05D008380 4.4e-07 59.3 55 56.4
HPP92_005506 Vanilla planifolia HOM05D006529 ORTHO05D008380 5.7e-07 58.9 165 31.5
SMO164G0011 Selaginella moellendorffii HOM05D006529 ORTHO05D008380 1.3e-06 57.8 155 26.5


User provided reference genes

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