Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG3G5820 Aethionema arabicum HOM05D005518 ORTHO05D001269 8.2e-282 973.4 621 100.0
Thhalv10013029m.g Eutrema salsugineum HOM05D005518 ORTHO05D001269 6.9e-188 661.4 639 68.7
Sp6g12480 Schrenkiella parvula HOM05D005518 ORTHO05D001269 2.7e-184 649.4 639 67.1
AL8G24460 Arabidopsis lyrata HOM05D005518 ORTHO05D001269 8.2e-181 637.9 639 66.0
BraA03t11991Z Brassica rapa HOM05D005518 ORTHO05D001269 1.4e-172 610.5 632 65.5
Carub.0008s1043 Capsella rubella HOM05D005518 ORTHO05D001269 5.3e-172 608.6 638 71.2
A03p27800 Brassica napus HOM05D005518 ORTHO05D001269 1.2e-171 607.4 632 62.7
AT5G50350 Arabidopsis thaliana HOM05D005518 ORTHO05D001269 2.6e-171 606.3 635 66.5
C03p33530 Brassica napus HOM05D005518 ORTHO05D001269 6.5e-170 601.7 632 65.3
BolC3t15674H Brassica oleracea HOM05D005518 ORTHO05D001269 6.5e-170 601.7 632 65.0
BcaC01g04812 Brassica carinata HOM05D005518 ORTHO05D001269 1.9e-169 600.1 632 65.2
CARHR258130 Cardamine hirsuta HOM05D005518 ORTHO05D001269 3.6e-168 595.9 634 63.7
BcaB01g02898 Brassica carinata HOM05D004180 ORTHO05D001269 4.0e-167 592.4 626 62.3
THA.LOC104825006 Tarenaya hassleriana HOM05D005518 ORTHO05D001269 8.9e-127 458.4 641 51.6
THA.LOC104803143 Tarenaya hassleriana HOM05D005518 ORTHO05D001269 1.6e-123 447.6 640 58.6
Cpa.g.sc4.97 Carica papaya HOM05D005518 ORTHO05D001269 2.1e-83 314.3 677 38.1
Thecc.03G124400 Theobroma cacao HOM05D005518 ORTHO05D001269 1.5e-81 308.1 679 39.3
CiPaw.12G036400 Carya illinoinensis HOM05D005518 ORTHO05D001269 4.8e-80 303.1 679 37.8
Gohir.D09G246400 Gossypium hirsutum HOM05D005518 ORTHO05D001269 8.5e-77 292.4 680 37.9
Gorai.006G270900 Gossypium raimondii HOM05D005518 ORTHO05D001269 1.1e-76 292.0 682 37.2
Sabra12G0068800 Salix brachista HOM05D005518 ORTHO05D001269 7.2e-76 289.3 676 37.0
PGR044G0025 Punica granatum HOM05D005518 ORTHO05D001269 9.4e-76 288.9 669 37.2
Potri.012G094200 Populus trichocarpa HOM05D005518 ORTHO05D001269 2.1e-75 287.7 668 36.5
Duzib205G1346 Durio zibethinus HOM05D005518 ORTHO05D001269 4.6e-75 286.6 673 40.0
CANSAT80G2082 Cannabis sativa HOM05D005518 ORTHO05D001269 6.1e-75 286.2 697 36.6
COL.COLO4_16831 Corchorus olitorius HOM05D005518 ORTHO05D001269 1.8e-74 284.6 666 38.7
Gohir.A09G245800 Gossypium hirsutum HOM05D005518 ORTHO05D001269 5.7e-73 279.6 676 37.1
CiPaw.11G011000 Carya illinoinensis HOM05D005518 ORTHO05D001269 5.3e-71 273.1 692 37.1
Sabra15G0113400 Salix brachista HOM05D005518 ORTHO05D001269 1.4e-68 265.0 681 34.9
Potri.015G091500 Populus trichocarpa HOM05D005518 ORTHO05D001269 1.2e-67 261.9 670 37.8
GSVIVG01003640001 Vitis vinifera HOM05D005518 ORTHO05D001269 3.6e-67 260.4 693 35.9
Duzib084G0018 Durio zibethinus HOM05D005518 ORTHO05D001269 4.7e-67 260.0 715 34.8
Prupe.5G155700 Prunus persica HOM05D005518 ORTHO05D001269 4.7e-67 260.0 687 37.1
Dinv04847 Davidia involucrata HOM05D005518 ORTHO05D001269 1.4e-66 258.5 694 35.7
Eucgr.K02750 Eucalyptus grandis HOM05D005518 ORTHO05D001269 1.8e-66 258.1 674 35.3
TWI14G0969 Tripterygium wilfordii HOM05D005518 ORTHO05D001269 1.8e-66 258.1 670 36.4
QL10p004779 Quercus lobata HOM05D005518 ORTHO05D001269 3.0e-66 257.3 693 35.9
RcHm_v2.0_Chr7g0190821 Rosa chinensis HOM05D005518 ORTHO05D001269 3.9e-66 256.9 685 36.1
Psat5g139920 Pisum sativum HOM05D005518 ORTHO05D001269 2.6e-65 254.2 647 38.5
Haze_07258 Corylus avellana HOM05D005518 ORTHO05D001269 5.7e-65 253.1 593 36.6
FAN13G1318 Fragaria x ananassa HOM05D005518 ORTHO05D001269 1.7e-64 251.5 678 35.3
FAN04G1413 Fragaria x ananassa HOM05D005518 ORTHO05D001269 3.7e-64 250.4 678 35.1
Lalb_Chr08g0237001 Lupinus albus HOM05D005518 ORTHO05D001269 3.7e-64 250.4 663 36.0
TAR626G1948 Trochodendron aralioides HOM05D005518 ORTHO05D001269 3.7e-64 250.4 702 34.5
Atru.chr9.1022 Acer truncatum HOM05D005518 ORTHO05D001269 4.8e-64 250.0 684 34.8
Ciclev10019441m.g Citrus clementina HOM05D005518 ORTHO05D001269 8.2e-64 249.2 669 39.0
Gorai.007G042000 Gossypium raimondii HOM05D005518 ORTHO05D001269 3.1e-63 247.3 683 35.0
FAN08G0706 Fragaria x ananassa HOM05D005518 ORTHO05D001269 4.1e-63 246.9 674 34.9
Glyma.04G193600 Glycine max HOM05D005518 ORTHO05D001269 5.3e-63 246.5 654 37.3
Gohir.A11G035500 Gossypium hirsutum HOM05D005518 ORTHO05D001269 5.3e-63 246.5 690 35.8
FvH4_5g07650 Fragaria vesca HOM05D005518 ORTHO05D001269 7.0e-63 246.1 677 35.2
FAN25G1054 Fragaria x ananassa HOM05D005518 ORTHO05D001269 9.1e-63 245.7 675 34.7
Gohir.D11G039100 Gossypium hirsutum HOM05D005518 ORTHO05D001269 2.0e-62 244.6 683 34.6
Lj1g0006481 Lotus japonicus HOM05D005518 ORTHO05D001269 1.3e-61 241.9 670 36.0
Glyma.06G172500 Glycine max HOM05D005518 ORTHO05D001269 2.2e-61 241.1 689 34.5
Actinidia16187 Actinidia chinensis HOM05D005518 ORTHO05D001269 5.0e-61 240.0 671 34.4
Rhsim12G0172400 Rhododendron simsii HOM05D005518 ORTHO05D001269 8.5e-61 239.2 687 39.4
RcHm_v2.0_Chr1g0380401 Rosa chinensis HOM05D005518 ORTHO05D001269 8.5e-61 239.2 680 34.4
Actinidia36793 Actinidia chinensis HOM05D005518 ORTHO05D001269 1.2e-59 235.3 691 33.4
Lalb_Chr11g0069691 Lupinus albus HOM05D005518 ORTHO05D001269 1.2e-59 235.3 666 35.6
Nn1g07622 Nelumbo nucifera HOM05D005518 ORTHO05D001269 2.7e-59 234.2 705 33.9
Manes.06G116500 Manihot esculenta HOM05D005518 ORTHO05D001269 3.6e-59 233.8 674 36.9
arahy.Tifrunner.gnm1.ann1.QFFJ7D Arachis hypogaea HOM05D005518 ORTHO05D001269 4.0e-58 230.3 669 37.1
Manes.14G054500 Manihot esculenta HOM05D005518 ORTHO05D001269 8.8e-58 229.2 649 34.8
arahy.Tifrunner.gnm1.ann1.P5I184 Arachis hypogaea HOM05D001134 ORTHO05D001269 1.3e-56 225.3 620 37.3
Medtr3g075070 Medicago truncatula HOM05D005518 ORTHO05D001269 1.7e-56 224.9 675 34.7
CSS0041106 Camellia sinensis var. sinensis HOM05D005518 ORTHO05D001269 1.4e-55 221.9 671 34.0
Phvul.009G168300 Phaseolus vulgaris HOM05D005518 ORTHO05D001269 1.4e-55 221.9 679 35.8
TPR.G26139 Trifolium pratense HOM05D005518 ORTHO05D001269 2.4e-55 221.1 680 35.0
Sed0017473 Sechium edule HOM05D005518 ORTHO05D001269 1.6e-54 218.4 673 33.6
ClCG03G003580 Citrullus lanatus HOM05D005518 ORTHO05D001269 4.5e-54 216.9 714 33.1
CsaV3_1G009430 Cucumis sativus L. HOM05D005518 ORTHO05D001269 5.9e-54 216.5 683 32.1
Sed0015656 Sechium edule HOM05D005518 ORTHO05D001269 7.7e-54 216.1 678 32.4
SGA_v2.0_scaffold37G14614 Striga asiatica HOM05D005518 ORTHO05D001269 1.1e-52 212.2 682 32.4
vmacro16655 Vaccinium macrocarpon HOM05D005518 ORTHO05D001269 1.5e-52 211.8 644 37.3
Hund02416 Selenicereus undatus HOM05D005518 ORTHO05D001269 2.5e-52 211.1 657 33.3
Migut.D01234 Erythranthe guttata HOM05D005518 ORTHO05D001269 1.6e-51 208.4 672 33.3
TWI23G0187 Tripterygium wilfordii HOM05D005518 ORTHO05D001269 2.1e-51 208.0 675 36.0
Dinv11102 Davidia involucrata HOM05D005518 ORTHO05D001269 8.8e-50 202.6 690 31.9
DCAR_007472 Daucus carota HOM05D005518 ORTHO05D001269 1.2e-49 202.2 683 32.5
AUR62025869 Chenopodium quinoa HOM05D005518 ORTHO05D001269 2.6e-49 201.1 686 31.9
PSO782G5170 Papaver somniferum HOM05D005518 ORTHO05D001269 5.7e-49 199.9 682 36.4
Sc04g0000850 Simmondsia chinensis HOM05D005518 ORTHO05D001269 7.5e-49 199.5 652 32.5
VMungo1309G2768 Vigna mungo HOM05D005518 ORTHO05D001269 1.7e-48 198.4 661 33.3
MELO3C002344.2 Cucumis melo HOM05D005518 ORTHO05D001269 2.8e-48 197.6 691 31.4
SalBow1G4741 Salvia bowleyana HOM05D005518 ORTHO05D001269 3.7e-48 197.2 589 41.3
Lj5C99T12 Lonicera japonica HOM05D005518 ORTHO05D001269 7.0e-47 193.0 698 37.4
Cc04_g10180 Coffea canephora HOM05D005518 ORTHO05D001269 9.1e-47 192.6 684 37.6
FAN18G1514 Fragaria x ananassa HOM05D000557 ORTHO05D001269 9.1e-47 192.6 586 34.3
Peaxi162Scf00089g00324 Petunia axillaris HOM05D005518 ORTHO05D001269 7.7e-46 189.5 672 35.4
AUR62029840 Chenopodium quinoa HOM05D005518 ORTHO05D001269 2.2e-45 188.0 702 32.3
EL10As4g23466 Beta vulgaris HOM05D005518 ORTHO05D001269 1.1e-44 185.7 649 31.7
PGSC0003DMG400015252 Solanum tuberosum HOM05D005518 ORTHO05D001269 9.4e-44 182.6 655 33.6
MD06G1148700 Malus domestica HOM05D005518 ORTHO05D001269 3.6e-43 180.6 646 33.4
Aqoxy4G02270 Aquilegia oxysepala HOM05D005518 ORTHO05D001269 1.8e-42 178.3 677 31.8
Oeu055998.1 Olea europaea HOM05D005518 ORTHO05D001269 2.3e-42 177.9 656 32.3
MSTRG.22916 Avicennia marina HOM05D005518 ORTHO05D001269 5.2e-42 176.8 671 31.3
MSTRG.9316 Avicennia marina HOM05D005518 ORTHO05D001269 5.2e-42 176.8 639 32.4
CDE06G2288 Ceratophyllum demersum HOM05D005518 ORTHO05D005913 2.6e-41 174.5 681 31.0
Lj9A476T55 Lonicera japonica HOM05D005518 ORTHO05D001269 8.3e-40 169.5 627 32.7
MBI14_g12740_MAGBIO Magnolia biondii HOM05D005518 ORTHO05D001269 1.4e-39 168.7 700 35.7
Sopen03g030200 Solanum pennellii HOM05D005518 ORTHO05D001269 9.1e-39 166.0 649 31.7
Lsat_1_v5_gn_1_29580 Lactuca sativa HOM05D005518 ORTHO05D001269 4.5e-38 163.7 654 35.6
PSO063G3591 Papaver somniferum HOM05D005518 ORTHO05D001269 2.9e-37 161.0 674 30.7
Nitab4.5_0005327g0060 Nicotiana tabacum HOM05D005518 ORTHO05D001269 5.0e-37 160.2 657 31.4
ECA247G0960 Erigeron canadensis HOM05D005518 ORTHO05D001269 1.9e-36 158.3 690 27.8
Solyc03g111030.3 Solanum lycopersicum HOM05D005518 ORTHO05D001269 1.9e-36 158.3 655 31.8
HanXRQChr04g0100301 Helianthus annuus HOM05D005518 ORTHO05D001269 3.3e-36 157.5 690 29.0
ATR0751G048 Amborella trichopoda HOM05D005518 ORTHO05D001269 4.7e-35 153.7 692 35.1
CSS0040133 Camellia sinensis var. sinensis HOM05D005518 ORTHO05D001269 6.1e-35 153.3 271 40.6
Nitab4.5_0001664g0120 Nicotiana tabacum HOM05D005518 ORTHO05D001269 1.8e-34 151.8 665 30.2
HanXRQChr02g0035181 Helianthus annuus HOM05D005518 ORTHO05D001269 2.3e-34 151.4 654 28.7
CDE03G0480 Ceratophyllum demersum HOM05D005518 ORTHO05D001269 3.0e-34 151.0 658 29.2
Os06g0609800 Oryza sativa ssp. japonica HOM05D005518 ORTHO05D001269 8.9e-34 149.4 419 35.1
Oeu006376.1 Olea europaea HOM05D005518 ORTHO05D001269 2.9e-32 144.4 352 35.2
CAN.G352.49 Capsicum annuum HOM05D005518 ORTHO05D001269 4.9e-32 143.7 643 30.9
Migut.I00490 Erythranthe guttata HOM05D005518 ORTHO05D001269 9.2e-31 139.4 565 30.1
Oeu023474.2 Olea europaea HOM05D005518 ORTHO05D001269 2.5e-28 131.3 647 35.5
vmacro16713 Vaccinium macrocarpon HOM05D005518 ORTHO05D001269 2.5e-28 131.3 256 37.9
Zm00001eb388520 Zea mays HOM05D005518 ORTHO05D001269 4.3e-28 130.6 679 27.5
Duzib068G1391 Durio zibethinus HOM05D005518 ORTHO05D001269 1.5e-25 122.1 339 36.9
Ca_25438_v3 Cicer arietinum L. HOM05D005518 ORTHO05D001269 2.9e-24 117.9 196 42.3
Sc22g0004150 Simmondsia chinensis HOM05D005518 ORTHO05D001269 4.9e-24 117.1 305 35.1
MD14G1162500 Malus domestica HOM05D005518 ORTHO05D001269 1.0e-21 109.4 438 32.6
MD14G1162600 Malus domestica HOM05D005518 ORTHO05D001269 7.3e-20 103.2 203 38.4
Sc22g0004140 Simmondsia chinensis HOM05D005518 ORTHO05D001269 9.8e-17 92.8 105 56.2
SEGI_11479 Sequoiadendron giganteum HOM05D005518 ORTHO05D001269 2.2e-16 91.7 320 28.1
SEGI_40207 Sequoiadendron giganteum HOM05D005518 ORTHO05D001269 3.5e-14 84.3 410 27.1
Ca_16087_v3 Cicer arietinum L. HOM05D005518 ORTHO05D001269 2.3e-13 81.6 165 46.7
vmacro16712 Vaccinium macrocarpon HOM05D005518 ORTHO05D001269 3.0e-13 81.3 119 45.4
arahy.Tifrunner.gnm1.ann1.QJ9WGP Arachis hypogaea HOM05D001134 ORTHO05D001035 3.9e-13 80.9 108 46.3
Actinidia25603 Actinidia chinensis HOM05D005518 ORTHO05D001269 7.3e-12 76.6 341 29.3
CSS0031701 Camellia sinensis var. sinensis HOM05D005518 ORTHO05D001269 3.6e-11 74.3 399 29.8
HPP92_027039 Vanilla planifolia HOM05D005518 ORTHO05D001269 1.4e-10 72.4 157 41.4
unitig_22.g5764 Utricularia gibba HOM05D005518 ORTHO05D001269 4.4e-09 67.4 170 45.3
Cfa018874 Carpinus fangiana HOM05D005518 ORTHO05D001269 3.7e-08 64.3 94 50.0
COL.COLO4_28923 Corchorus olitorius HOM05D007286 ORTHO05D008955 1.4e-07 62.4 99 42.4
Actinidia08857 Actinidia chinensis HOM05D005518 ORTHO05D001269 1.9e-07 62.0 339 28.0
Actinidia12136 Actinidia chinensis HOM05D007286 ORTHO05D008955 3.2e-07 61.2 89 46.1
Thecc.10G130100 Theobroma cacao HOM05D007286 ORTHO05D008955 3.2e-07 61.2 89 43.8
Oeu013048.2 Olea europaea HOM05D007286 ORTHO05D008955 9.2e-07 59.7 101 41.6
Eucgr.G02637 Eucalyptus grandis HOM05D007286 ORTHO05D008955 1.2e-06 59.3 89 46.1
ATR0307G001 Amborella trichopoda HOM05D007286 ORTHO05D008955 2.1e-06 58.5 109 41.3
Duzib128G1558 Durio zibethinus HOM05D000138 ORTHO05D008955 2.1e-06 58.5 89 42.7
Nitab4.5_0001611g0060 Nicotiana tabacum HOM05D007286 ORTHO05D008955 2.1e-06 58.5 89 43.8
Rhsim07G0072400 Rhododendron simsii HOM05D007286 ORTHO05D008955 2.7e-06 58.2 89 44.9
Gorai.009G301600 Gossypium raimondii HOM05D007286 ORTHO05D008955 3.5e-06 57.8 241 29.9
Sabra08G0007300 Salix brachista HOM05D007286 ORTHO05D008955 3.5e-06 57.8 89 46.1
CSS0007228 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 4.6e-06 57.4 89 47.2
CSS0046865 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D008955 4.6e-06 57.4 89 47.2
Peaxi162Scf00647g00320 Petunia axillaris HOM05D007286 ORTHO05D008955 6.0e-06 57.0 243 28.4
Sc09g0004920 Simmondsia chinensis HOM05D007286 ORTHO05D008955 6.0e-06 57.0 246 29.7
SGA_v2.0_scaffold143G35713 Striga asiatica HOM05D007286 ORTHO05D008955 6.0e-06 57.0 89 42.7
Cc07_g21350 Coffea canephora HOM05D007286 ORTHO05D008955 7.8e-06 56.6 85 44.7
Dinv20486 Davidia involucrata HOM05D007286 ORTHO05D008955 7.8e-06 56.6 89 46.1
Sabra10G0192500 Salix brachista HOM05D007286 ORTHO05D008955 7.8e-06 56.6 89 44.9
Sopen01g040600 Solanum pennellii HOM05D007286 ORTHO05D008955 7.8e-06 56.6 101 40.6


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