Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG3G5510 Aethionema arabicum HOM05D004031 ORTHO05D006678 2.6e-43 178.3 91 100.0
Aa31LG3G5440 Aethionema arabicum HOM05D004031 ORTHO05D006678 1.9e-41 172.2 91 95.6
Sp3g10240 Schrenkiella parvula HOM05D004031 ORTHO05D006678 3.7e-37 157.9 91 87.9
Thhalv10020623m.g Eutrema salsugineum HOM05D004031 ORTHO05D006678 8.1e-37 156.8 91 86.8
Carub.0003s1135 Capsella rubella HOM05D004031 ORTHO05D006678 1.1e-36 156.4 91 85.7
AT3G12010 Arabidopsis thaliana HOM05D004031 ORTHO05D006678 1.8e-36 155.6 91 84.6
BcaB04g18697 Brassica carinata HOM05D004031 ORTHO05D006678 9.0e-36 153.3 91 84.6
BcaC01g04064 Brassica carinata HOM05D004031 ORTHO05D006678 9.0e-36 153.3 91 84.6
A03p37440 Brassica napus HOM05D004031 ORTHO05D006678 9.0e-36 153.3 91 84.6
C03p45440 Brassica napus HOM05D004031 ORTHO05D006678 9.0e-36 153.3 91 84.6
BraA03t12904Z Brassica rapa HOM05D004031 ORTHO05D006678 9.0e-36 153.3 91 84.6
AL3G23620 Arabidopsis lyrata HOM05D004031 ORTHO05D006678 1.5e-35 152.5 91 83.5
CARHR086570 Cardamine hirsuta HOM05D004031 ORTHO05D006678 1.5e-35 152.5 90 83.3
BolC3t16811H Brassica oleracea HOM05D004031 ORTHO05D006678 2.6e-35 151.8 91 83.5
BcaB06g25555 Brassica carinata HOM05D004031 ORTHO05D006678 3.0e-31 138.3 90 74.4
CiPaw.10G024900 Carya illinoinensis HOM05D004031 ORTHO05D006678 4.3e-30 134.4 91 71.4
THA.LOC104799283 Tarenaya hassleriana HOM05D004031 ORTHO05D006678 9.6e-30 133.3 91 74.7
Gohir.A01G137300 Gossypium hirsutum HOM05D004031 ORTHO05D006678 1.6e-29 132.5 91 69.2
Gohir.D01G124700 Gossypium hirsutum HOM05D004031 ORTHO05D006678 1.6e-29 132.5 91 69.2
Gorai.002G155200 Gossypium raimondii HOM05D004031 ORTHO05D006678 1.6e-29 132.5 91 69.2
MD14G1053000 Malus domestica HOM05D004031 ORTHO05D006678 2.8e-29 131.7 91 68.1
CiPaw.09G027800 Carya illinoinensis HOM05D004031 ORTHO05D006678 3.7e-29 131.3 88 71.6
Prupe.7G082700 Prunus persica HOM05D004031 ORTHO05D006678 3.7e-29 131.3 91 69.2
Dinv16349 Davidia involucrata HOM05D004031 ORTHO05D006678 6.2e-29 130.6 91 68.1
BcaC05g29296 Brassica carinata HOM05D004031 ORTHO05D006678 1.1e-28 129.8 76 84.2
C05p55790 Brassica napus HOM05D004031 ORTHO05D006678 1.1e-28 129.8 76 84.2
BolC5t34246H Brassica oleracea HOM05D004031 ORTHO05D006678 1.1e-28 129.8 76 84.2
QL07p024699 Quercus lobata HOM05D004031 ORTHO05D006678 1.8e-28 129.0 88 71.6
TAR623G1150 Trochodendron aralioides HOM05D004031 ORTHO05D006678 1.8e-28 129.0 91 67.0
Cfa020139 Carpinus fangiana HOM05D004031 ORTHO05D006678 2.4e-28 128.6 91 69.2
Lj1g0024200 Lotus japonicus HOM05D004031 ORTHO05D006678 2.4e-28 128.6 91 67.0
Thecc.05G175900 Theobroma cacao HOM05D004031 ORTHO05D006678 4.0e-28 127.9 91 65.9
GSVIVG01033461001 Vitis vinifera HOM05D004031 ORTHO05D006678 4.0e-28 127.9 91 68.1
CSS0004189 Camellia sinensis var. sinensis HOM05D004031 ORTHO05D006678 1.2e-27 126.3 91 65.9
Haze_20030 Corylus avellana HOM05D004031 ORTHO05D006678 1.2e-27 126.3 91 68.1
MBI13_g29636_MAGBIO Magnolia biondii HOM05D004031 ORTHO05D006678 1.2e-27 126.3 85 68.2
TAR623G0223 Trochodendron aralioides HOM05D004031 ORTHO05D006678 1.2e-27 126.3 91 64.8
vmacro22628 Vaccinium macrocarpon HOM05D004031 ORTHO05D006678 1.2e-27 126.3 91 65.9
Cc06_g15550 Coffea canephora HOM05D004031 ORTHO05D006678 1.5e-27 125.9 91 67.0
Sc13g0002440 Simmondsia chinensis HOM05D004031 ORTHO05D006678 1.5e-27 125.9 91 67.0
TPR.G13372 Trifolium pratense HOM05D004031 ORTHO05D006678 1.5e-27 125.9 91 65.9
Glyma.19G150400 Glycine max HOM05D004031 ORTHO05D006678 2.0e-27 125.6 91 64.8
Lalb_Chr15g0079131 Lupinus albus HOM05D004031 ORTHO05D006678 2.0e-27 125.6 90 64.4
Potri.006G195000 Populus trichocarpa HOM05D004031 ORTHO05D006678 2.0e-27 125.6 91 67.0
Aqoxy1G00041 Aquilegia oxysepala HOM05D004031 ORTHO05D006678 2.6e-27 125.2 91 63.7
Manes.09G038300 Manihot esculenta HOM05D004031 ORTHO05D006678 2.6e-27 125.2 91 63.7
Ca_08544_v3 Cicer arietinum L. HOM05D004031 ORTHO05D006678 3.4e-27 124.8 91 64.8
Rhsim03G0003600 Rhododendron simsii HOM05D004031 ORTHO05D006678 4.5e-27 124.4 91 65.9
Atru.chr8.1164 Acer truncatum HOM05D004031 ORTHO05D006678 7.6e-27 123.6 91 65.9
Medtr7g093740 Medicago truncatula HOM05D004031 ORTHO05D006678 7.6e-27 123.6 91 63.7
Phvul.001G144700 Phaseolus vulgaris HOM05D004031 ORTHO05D006678 7.6e-27 123.6 91 62.6
Psat3g066880 Pisum sativum HOM05D004031 ORTHO05D006678 7.6e-27 123.6 91 65.9
MD12G1054100 Malus domestica HOM05D004031 ORTHO05D006678 1.7e-26 122.5 91 63.7
TWI74G0357 Tripterygium wilfordii HOM05D004031 ORTHO05D006678 1.7e-26 122.5 88 64.8
FAN02G1852 Fragaria x ananassa HOM05D004031 ORTHO05D006678 2.2e-26 122.1 91 65.9
Nn7g35952 Nelumbo nucifera HOM05D004031 ORTHO05D006678 2.2e-26 122.1 91 61.5
Sabra06G0149700 Salix brachista HOM05D004031 ORTHO05D006678 4.9e-26 120.9 91 64.8
Lsat_1_v5_gn_6_36500 Lactuca sativa HOM05D004031 ORTHO05D006678 6.5e-26 120.6 91 65.9
Peaxi162Scf00463g00518 Petunia axillaris HOM05D004031 ORTHO05D006678 6.5e-26 120.6 91 62.6
FAN05G0520 Fragaria x ananassa HOM05D004031 ORTHO05D006678 8.4e-26 120.2 91 63.7
RcHm_v2.0_Chr3g0479121 Rosa chinensis HOM05D004031 ORTHO05D006678 8.4e-26 120.2 91 63.7
AUR62012010 Chenopodium quinoa HOM05D004031 ORTHO05D006678 1.1e-25 119.8 89 64.0
Hma1.2p1_0124F.1_g058320 Hydrangea macrophylla HOM05D004031 ORTHO05D006678 1.1e-25 119.8 91 63.7
Nitab4.5_0000009g0250 Nicotiana tabacum HOM05D004031 ORTHO05D006678 1.1e-25 119.8 91 62.6
Sed0017241 Sechium edule HOM05D004031 ORTHO05D006678 1.1e-25 119.8 83 67.5
Solyc03g053010.4 Solanum lycopersicum HOM05D004031 ORTHO05D006678 1.1e-25 119.8 89 65.2
Eucgr.K01855 Eucalyptus grandis HOM05D004031 ORTHO05D006678 1.4e-25 119.4 83 68.7
Lj1A1132T32 Lonicera japonica HOM05D004031 ORTHO05D006678 1.9e-25 119.0 91 61.5
Lju124A22T15 Lonicera japonica HOM05D004031 ORTHO05D006678 1.9e-25 119.0 91 61.5
Sopen03g011490 Solanum pennellii HOM05D004031 ORTHO05D006678 2.5e-25 118.6 89 64.0
CANSAT64G2464 Cannabis sativa HOM05D004031 ORTHO05D006678 3.2e-25 118.2 83 67.5
Ciclev10013737m.g Citrus clementina HOM05D004031 ORTHO05D006678 3.2e-25 118.2 88 62.5
ECA233G4423 Erigeron canadensis HOM05D004031 ORTHO05D006678 3.2e-25 118.2 91 61.5
Glyma.03G147000 Glycine max HOM05D004031 ORTHO05D006678 3.2e-25 118.2 91 61.5
HanXRQChr13g0398361 Helianthus annuus HOM05D004031 ORTHO05D006678 3.2e-25 118.2 91 63.7
EL10Ac3g06876 Beta vulgaris HOM05D004031 ORTHO05D006678 4.2e-25 117.9 83 67.5
DCAR_009690 Daucus carota HOM05D004031 ORTHO05D006678 4.2e-25 117.9 91 62.6
arahy.Tifrunner.gnm1.ann1.4B2YIP Arachis hypogaea HOM05D004031 ORTHO05D006678 7.1e-25 117.1 91 61.5
Cpa.g.c40176 Carica papaya HOM05D004031 ORTHO05D006678 7.1e-25 117.1 91 65.9
Sabra16G0063400 Salix brachista HOM05D004031 ORTHO05D006678 7.1e-25 117.1 91 62.6
FvH4_6g21770 Fragaria vesca HOM05D004031 ORTHO05D006678 9.3e-25 116.7 91 62.6
CAN.G454.1 Capsicum annuum HOM05D004031 ORTHO05D006678 1.2e-24 116.3 91 60.4
arahy.Tifrunner.gnm1.ann1.YX753W Arachis hypogaea HOM05D004031 ORTHO05D006678 1.6e-24 115.9 91 60.4
Migut.J01861 Erythranthe guttata HOM05D004031 ORTHO05D006678 1.6e-24 115.9 83 65.1
FAN09G1850 Fragaria x ananassa HOM05D004031 ORTHO05D006678 1.6e-24 115.9 88 62.5
Potri.016G060500 Populus trichocarpa HOM05D004031 ORTHO05D006678 1.6e-24 115.9 91 61.5
PGR142G3960 Punica granatum HOM05D004031 ORTHO05D006678 1.6e-24 115.9 85 63.5
Oeu057586.3 Olea europaea HOM05D004031 ORTHO05D006678 2.1e-24 115.5 91 59.3
ATR0598G228 Amborella trichopoda HOM05D004031 ORTHO05D006678 2.7e-24 115.2 85 62.4
MELO3C009604.2 Cucumis melo HOM05D004031 ORTHO05D006678 2.7e-24 115.2 83 66.3
SGA_v2.0_scaffold105G30510 Striga asiatica HOM05D004031 ORTHO05D006678 2.7e-24 115.2 83 65.1
SalBow6G5892 Salvia bowleyana HOM05D004031 ORTHO05D006678 6.0e-24 114.0 83 62.7
Sed0010020 Sechium edule HOM05D004031 ORTHO05D006678 6.0e-24 114.0 88 64.8
MSTRG.19923 Avicennia marina HOM05D004031 ORTHO05D006678 7.9e-24 113.6 83 63.9
unitig_21.g20577 Utricularia gibba HOM05D004031 ORTHO05D006678 7.9e-24 113.6 83 60.2
HPP92_024784 Vanilla planifolia HOM05D004031 ORTHO05D006678 1.1e-22 109.8 85 62.4
PSO339G3947 Papaver somniferum HOM05D004031 ORTHO05D006678 5.7e-22 107.5 85 58.8
SHI31751 Sapria himalayana HOM05D004031 ORTHO05D006678 2.8e-21 105.1 83 59.0
PSO384G3799 Papaver somniferum HOM05D004031 ORTHO05D006678 3.7e-21 104.8 85 57.6
Nitab4.5_0007281g0010 Nicotiana tabacum HOM05D004031 ORTHO05D006678 1.5e-19 99.4 94 54.3
Os10g0400900 Oryza sativa ssp. japonica HOM05D004031 ORTHO05D006678 7.6e-19 97.1 83 55.4
CDE05G0445 Ceratophyllum demersum HOM05D004031 ORTHO05D006678 1.1e-17 93.2 83 50.6
Pp3c6_28540 Physcomitrium patens HOM05D004031 ORTHO05D006678 4.6e-16 87.8 83 50.6
Dinv24047 Davidia involucrata HOM05D004031 ORTHO05D006678 1.4e-15 86.3 50 82.0
Mapoly0005s0167 Marchantia polymorpha HOM05D004031 ORTHO05D006678 4.8e-13 77.8 83 45.8
Actinidia32416 Actinidia chinensis HOM05D004031 ORTHO05D006678 6.9e-12 73.9 43 81.4
AUR62015326 Chenopodium quinoa HOM05D004031 ORTHO05D006678 7.9e-08 60.5 33 84.8
VMungo1383G1586 Vigna mungo HOM05D004031 ORTHO05D006678 1.0e-07 60.1 35 77.1


User provided reference genes

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