Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG3G5450 Aethionema arabicum HOM05D004031 ORTHO05D011186 9.9e-36 152.9 77 100.0
Aa31LG3G5490 Aethionema arabicum HOM05D004031 ORTHO05D011186 7.1e-26 120.2 62 95.2
Carub.0003s1134 Capsella rubella HOM05D004031 ORTHO05D011186 5.7e-23 110.5 62 87.1
BcaB04g18697 Brassica carinata HOM05D004031 ORTHO05D006678 7.4e-23 110.2 58 86.2
A03p37430 Brassica napus HOM05D004031 ORTHO05D011186 3.1e-21 104.8 61 82.0
BcaC01g04064 Brassica carinata HOM05D004031 ORTHO05D006678 2.0e-20 102.1 59 79.7
BolC3t16811H Brassica oleracea HOM05D004031 ORTHO05D006678 2.0e-20 102.1 59 79.7
C03p45440 Brassica napus HOM05D004031 ORTHO05D006678 1.7e-19 99.0 59 78.0
BraA03t12904Z Brassica rapa HOM05D004031 ORTHO05D006678 3.8e-19 97.8 60 80.0
BcaC05g29296 Brassica carinata HOM05D004031 ORTHO05D006678 6.1e-17 90.5 58 75.9
C05p55790 Brassica napus HOM05D004031 ORTHO05D006678 6.1e-17 90.5 58 75.9
GSVIVG01033459001 Vitis vinifera HOM05D004031 ORTHO05D011186 6.7e-16 87.0 62 71.0
Potri.016G060550 Populus trichocarpa HOM05D004031 ORTHO05D011186 1.5e-15 85.9 62 67.7
Thecc.05G176000 Theobroma cacao HOM05D004031 ORTHO05D011186 1.5e-15 85.9 62 69.4
Dinv16349 Davidia involucrata HOM05D004031 ORTHO05D006678 3.3e-15 84.7 60 68.3
Manes.09G038400 Manihot esculenta HOM05D004031 ORTHO05D011186 3.3e-15 84.7 62 66.1
Eucgr.K01857 Eucalyptus grandis HOM05D004031 ORTHO05D011186 2.2e-14 82.0 60 68.3
Actinidia32416 Actinidia chinensis HOM05D004031 ORTHO05D006678 2.8e-14 81.6 57 63.2
Gohir.D01G124600 Gossypium hirsutum HOM05D004031 ORTHO05D011186 2.8e-14 81.6 62 66.1
MD12G1054200 Malus domestica HOM05D004031 ORTHO05D011186 2.8e-14 81.6 60 66.7
Prupe.7G082600 Prunus persica HOM05D004031 ORTHO05D011186 3.7e-14 81.3 58 67.2
Lalb_Chr15g0079141 Lupinus albus HOM05D004031 ORTHO05D011186 6.3e-14 80.5 62 62.9
Sabra06G0149700 Salix brachista HOM05D004031 ORTHO05D006678 6.3e-14 80.5 56 67.9
vmacro22628 Vaccinium macrocarpon HOM05D004031 ORTHO05D006678 6.3e-14 80.5 57 68.4
Duzib128G0401 Durio zibethinus HOM05D004031 ORTHO05D011186 8.2e-14 80.1 62 66.1
Gohir.A01G137400 Gossypium hirsutum HOM05D004031 ORTHO05D011186 8.2e-14 80.1 62 64.5
Sed0024429 Sechium edule HOM05D004031 ORTHO05D011186 1.1e-13 79.7 57 66.7
CDE05G3199 Ceratophyllum demersum HOM05D004031 ORTHO05D011186 1.4e-13 79.3 62 62.9
Migut.J01860 Erythranthe guttata HOM05D004031 ORTHO05D011186 1.8e-13 79.0 58 60.3
MELO3C009606.2 Cucumis melo HOM05D004031 ORTHO05D011186 4.1e-13 77.8 57 59.6
Nn7g35951 Nelumbo nucifera HOM05D004031 ORTHO05D011186 5.3e-13 77.4 63 57.1
Cfa020139 Carpinus fangiana HOM05D004031 ORTHO05D006678 6.9e-13 77.0 56 67.9
Phvul.001G144800 Phaseolus vulgaris HOM05D004031 ORTHO05D011186 6.9e-13 77.0 62 59.7
RcHm_v2.0_Chr3g0479131 Rosa chinensis HOM05D004031 ORTHO05D011186 9.1e-13 76.6 62 61.3
CSS0013106 Camellia sinensis var. sinensis HOM05D004031 ORTHO05D011186 1.2e-12 76.3 57 63.2
CsaV3_3G038610 Cucumis sativus L. HOM05D004031 ORTHO05D006678 1.5e-12 75.9 58 58.6
Hma1.2p1_0124F.1_g058300 Hydrangea macrophylla HOM05D004031 ORTHO05D011186 1.5e-12 75.9 57 64.9
Medtr7g093770 Medicago truncatula HOM05D004031 ORTHO05D011186 2.0e-12 75.5 60 61.7
Lj1g0020490 Lotus japonicus HOM05D004031 ORTHO05D011186 2.6e-12 75.1 57 63.2
Ciclev10013737m.g Citrus clementina HOM05D004031 ORTHO05D006678 4.5e-12 74.3 56 66.1
Glyma.19G150500 Glycine max HOM05D004031 ORTHO05D011186 7.7e-12 73.6 60 60.0
CiPaw.09G027900 Carya illinoinensis HOM05D004031 ORTHO05D011186 1.3e-11 72.8 62 59.7
Nitab4.5_0000009g0260 Nicotiana tabacum HOM05D004031 ORTHO05D011186 5.0e-11 70.9 61 57.4
Nn7g36859 Nelumbo nucifera HOM05D004031 ORTHO05D011186 6.5e-11 70.5 54 64.8
Nitab4.5_0007281g0010 Nicotiana tabacum HOM05D004031 ORTHO05D006678 8.5e-11 70.1 58 60.3
Cc06_g15560 Coffea canephora HOM05D004031 ORTHO05D011186 3.2e-10 68.2 61 59.0
Glyma.03G147100 Glycine max HOM05D004031 ORTHO05D011186 2.7e-09 65.1 61 54.1
Lj1A1132T32 Lonicera japonica HOM05D004031 ORTHO05D006678 6.7e-08 60.5 38 71.1
Hund06156 Selenicereus undatus HOM05D000159 ORTHO05D011186 8.8e-08 60.1 36 75.0
HPP92_024784 Vanilla planifolia HOM05D004031 ORTHO05D006678 1.5e-07 59.3 54 50.0
SEGI_01182 Sequoiadendron giganteum HOM05D004031 ORTHO05D011186 1.7e-06 55.8 37 64.9
SHI31744 Sapria himalayana HOM05D004031 ORTHO05D011186 2.2e-06 55.5 41 56.1


User provided reference genes

Program Settings