Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG3G5120 Aethionema arabicum HOM05D007702 ORTHO05D009736 1.0e-79 300.1 154 100.0
Aa31LG10G3400 Aethionema arabicum HOM05D007702 ORTHO05D009736 7.5e-43 177.6 155 67.1
BraA06t23478Z Brassica rapa HOM05D007702 ORTHO05D009736 1.9e-38 162.9 146 61.6
AL1G58880 Arabidopsis lyrata HOM05D007702 ORTHO05D009736 4.7e-37 158.3 113 71.7
BcaB07g33554 Brassica carinata HOM05D007702 ORTHO05D009736 2.3e-36 156.0 162 57.4
Carub.0001s3998 Capsella rubella HOM05D007702 ORTHO05D009736 3.1e-36 155.6 128 62.5
Sp1g37800 Schrenkiella parvula HOM05D007702 ORTHO05D009736 1.2e-35 153.7 117 66.7
BcaC08g43279 Brassica carinata HOM05D007702 ORTHO05D009736 1.5e-35 153.3 127 62.2
C06p06290 Brassica napus HOM05D007702 ORTHO05D009736 1.5e-35 153.3 127 62.2
BolC6t35738H Brassica oleracea HOM05D007702 ORTHO05D009736 1.5e-35 153.3 127 62.2
CARHR041100 Cardamine hirsuta HOM05D007702 ORTHO05D009736 1.5e-35 153.3 113 69.0
Thhalv10012117m.g Eutrema salsugineum HOM05D007702 ORTHO05D009736 2.6e-35 152.5 152 57.9
AT1G51080 Arabidopsis thaliana HOM05D007702 ORTHO05D009736 5.8e-35 151.4 117 67.5
A06p02690 Brassica napus HOM05D007702 ORTHO05D009736 3.7e-34 148.7 146 56.8
Aa31LG6G10000 Aethionema arabicum HOM05D007702 ORTHO05D009736 6.0e-32 141.4 100 70.0
THA.LOC104817895 Tarenaya hassleriana HOM05D007702 ORTHO05D009736 5.1e-31 138.3 136 55.1
COL.COLO4_31154 Corchorus olitorius HOM05D007702 ORTHO05D009736 2.8e-29 132.5 152 50.0
Cpa.g.sc155.12 Carica papaya HOM05D007702 ORTHO05D009736 3.4e-27 125.6 155 47.7
MD09G1165300 Malus domestica HOM05D007702 ORTHO05D009736 4.4e-27 125.2 144 48.6
Actinidia21887 Actinidia chinensis HOM05D007702 ORTHO05D009736 9.9e-27 124.0 146 50.0
Thecc.06G057000 Theobroma cacao HOM05D007702 ORTHO05D009736 9.9e-27 124.0 148 48.0
Duzib235G0870 Durio zibethinus HOM05D007702 ORTHO05D009736 2.2e-26 122.9 158 48.7
Prupe.3G023000 Prunus persica HOM05D007702 ORTHO05D009736 3.8e-26 122.1 107 57.0
TAR383G0542 Trochodendron aralioides HOM05D007702 ORTHO05D009736 3.8e-26 122.1 106 59.4
CiPaw.11G097300 Carya illinoinensis HOM05D007702 ORTHO05D009736 4.9e-26 121.7 106 58.5
Manes.06G177600 Manihot esculenta HOM05D007702 ORTHO05D009736 2.4e-25 119.4 156 47.4
PSO144G0036 Papaver somniferum HOM05D007702 ORTHO05D009736 2.4e-25 119.4 112 57.1
CSS0020400 Camellia sinensis var. sinensis HOM05D007702 ORTHO05D009736 3.2e-25 119.0 106 56.6
Migut.I01200 Erythranthe guttata HOM05D007702 ORTHO05D009736 5.4e-25 118.2 122 52.5
PGR042G2668 Punica granatum HOM05D007702 ORTHO05D009736 5.4e-25 118.2 108 52.8
Ah.08g217790 Amaranthus hybridus HOM05D007702 ORTHO05D009736 9.3e-25 117.5 146 47.9
Nitab4.5_0006053g0030 Nicotiana tabacum HOM05D007702 ORTHO05D009736 1.2e-24 117.1 107 55.1
Ciclev10032212m.g Citrus clementina HOM05D007702 ORTHO05D009736 2.7e-24 115.9 145 42.1
DCAR_007958 Daucus carota HOM05D007702 ORTHO05D009736 2.7e-24 115.9 149 47.7
MBI07_g12934_MAGBIO Magnolia biondii HOM05D007702 ORTHO05D009736 4.6e-24 115.2 107 57.0
Peaxi162Scf00051g00198 Petunia axillaris HOM05D007702 ORTHO05D009736 6.0e-24 114.8 107 55.1
Nitab4.5_0010634g0010 Nicotiana tabacum HOM05D007702 ORTHO05D009736 7.8e-24 114.4 129 49.6
FAN05G4144 Fragaria x ananassa HOM05D007715 ORTHO05D009760 1.0e-23 114.0 106 52.8
EL10Ac7g18156 Beta vulgaris HOM05D007702 ORTHO05D009736 1.3e-23 113.6 158 45.6
Sabra08G0002400 Salix brachista HOM05D007702 ORTHO05D009736 1.3e-23 113.6 159 44.0
FvH4_6g36940 Fragaria vesca HOM05D007702 ORTHO05D009736 3.0e-23 112.5 106 51.9
FAN14G5785 Fragaria x ananassa HOM05D007715 ORTHO05D009760 3.0e-23 112.5 106 51.9
Nn2g12749 Nelumbo nucifera HOM05D007702 ORTHO05D009736 3.0e-23 112.5 150 49.3
QL12p001257 Quercus lobata HOM05D007702 ORTHO05D009736 3.0e-23 112.5 161 45.3
Haze_08173 Corylus avellana HOM05D007702 ORTHO05D009736 3.9e-23 112.1 153 46.4
Potri.008G004800 Populus trichocarpa HOM05D007702 ORTHO05D009736 3.9e-23 112.1 159 39.6
Gohir.D10G002100 Gossypium hirsutum HOM05D007702 ORTHO05D009736 6.6e-23 111.3 153 46.4
Gorai.011G002500 Gossypium raimondii HOM05D007702 ORTHO05D009736 6.6e-23 111.3 153 46.4
Oeu049633.1 Olea europaea HOM05D007702 ORTHO05D009736 8.7e-23 110.9 156 47.4
RcHm_v2.0_Chr2g0149381 Rosa chinensis HOM05D007702 ORTHO05D009736 1.1e-22 110.5 135 46.7
Sopen01g045260 Solanum pennellii HOM05D007702 ORTHO05D009736 1.1e-22 110.5 145 45.5
Eucgr.J03180 Eucalyptus grandis HOM05D007702 ORTHO05D009736 1.5e-22 110.2 106 50.9
PSO423G0097 Papaver somniferum HOM05D007702 ORTHO05D009736 1.5e-22 110.2 113 53.1
FAN02G3529 Fragaria x ananassa HOM05D007715 ORTHO05D009760 1.9e-22 109.8 106 50.9
Cc03_g07590 Coffea canephora HOM05D007702 ORTHO05D009736 2.5e-22 109.4 156 45.5
Solyc01g102860.2 Solanum lycopersicum HOM05D007702 ORTHO05D009736 3.3e-22 109.0 153 44.4
CANSAT54G1387 Cannabis sativa HOM05D007702 ORTHO05D009736 4.3e-22 108.6 140 45.0
CDE05G1247 Ceratophyllum demersum HOM05D007702 ORTHO05D009736 5.6e-22 108.2 107 54.2
Cfa012496 Carpinus fangiana HOM05D007702 ORTHO05D009736 7.3e-22 107.8 153 45.1
Gohir.A10G002000 Gossypium hirsutum HOM05D007702 ORTHO05D009736 1.3e-21 107.1 153 44.4
unitig_748.g7485 Utricularia gibba HOM05D007702 ORTHO05D009736 1.3e-21 107.1 145 45.5
Atru.chr1.2666 Acer truncatum HOM05D007702 ORTHO05D009736 1.6e-21 106.7 112 49.1
AUR62001339 Chenopodium quinoa HOM05D007702 ORTHO05D009736 1.6e-21 106.7 143 45.5
Medtr2g101430 Medicago truncatula HOM05D007702 ORTHO05D009736 2.8e-21 105.9 108 49.1
Sc12g0011180 Simmondsia chinensis HOM05D007715 ORTHO05D009760 2.8e-21 105.9 148 44.6
SalBow6G4959 Salvia bowleyana HOM05D007702 ORTHO05D009736 4.8e-21 105.1 106 52.8
Aqoxy7G02739 Aquilegia oxysepala HOM05D007702 ORTHO05D009736 6.2e-21 104.8 144 47.2
Ca_00991_v3 Cicer arietinum L. HOM05D007702 ORTHO05D009736 8.1e-21 104.4 107 46.7
arahy.Tifrunner.gnm1.ann1.TT2UX9 Arachis hypogaea HOM05D007702 ORTHO05D009736 1.8e-20 103.2 106 48.1
GSVIVG01029550001 Vitis vinifera HOM05D007702 ORTHO05D009736 1.8e-20 103.2 107 48.6
CANSAT54G2309 Cannabis sativa HOM05D007702 ORTHO05D009736 2.4e-20 102.8 161 39.1
TPR.G39495 Trifolium pratense HOM05D007702 ORTHO05D009736 2.4e-20 102.8 108 51.9
PGSC0003DMG400018255 Solanum tuberosum HOM05D007702 ORTHO05D009736 9.0e-20 100.9 153 43.8
Lsat_1_v5_gn_1_39381 Lactuca sativa HOM05D007702 ORTHO05D009736 3.4e-19 99.0 107 45.8
AUR62025666 Chenopodium quinoa HOM05D007702 ORTHO05D009736 4.4e-19 98.6 148 40.5
CsaV3_7G033690 Cucumis sativus L. HOM05D007702 ORTHO05D009736 4.4e-19 98.6 108 47.2
Psat5g305320 Pisum sativum HOM05D007702 ORTHO05D009736 4.4e-19 98.6 107 48.6
MELO3C024282.2 Cucumis melo HOM05D007702 ORTHO05D009736 9.9e-19 97.4 108 47.2
SGA_v2.0_scaffold71G23985 Striga asiatica HOM05D007702 ORTHO05D009736 1.3e-18 97.1 106 42.5
CAN.G2401.1 Capsicum annuum HOM05D000005 ORTHO05D000012 2.4e-17 92.8 143 42.0
ClCG09G001650 Citrullus lanatus HOM05D007702 ORTHO05D009736 5.4e-17 91.7 144 39.6
ATR1126G014 Amborella trichopoda HOM05D007702 ORTHO05D009736 7.3e-14 81.3 129 39.5
vmacro18744 Vaccinium macrocarpon HOM05D007702 ORTHO05D009736 1.6e-13 80.1 107 43.0
FAN09G0474 Fragaria x ananassa HOM05D007715 ORTHO05D009760 2.8e-13 79.3 129 40.3
Os03g0138900 Oryza sativa ssp. japonica HOM05D007702 ORTHO05D009736 3.6e-13 79.0 108 44.4
ECA236G1927 Erigeron canadensis HOM05D007702 ORTHO05D009736 6.2e-13 78.2 146 35.6
Rhsim08G0250300 Rhododendron simsii HOM05D007702 ORTHO05D009736 6.2e-13 78.2 155 39.4
Pp3c5_18880 Physcomitrium patens HOM05D007702 ORTHO05D009736 8.1e-13 77.8 109 39.4
Zm00001eb230260 Zea mays HOM05D007702 ORTHO05D009736 1.5e-11 73.6 108 40.7
Mapoly0020s0094 Marchantia polymorpha HOM05D007702 ORTHO05D009736 2.0e-11 73.2 107 35.5
AagrBONN_evm.TU.Sc2ySwM_228.5746 Anthoceros agrestis HOM05D007702 ORTHO05D009736 3.4e-11 72.4 108 41.7
FAN07G0391 Fragaria x ananassa HOM05D007702 ORTHO05D009736 2.9e-10 69.3 42 66.7
Gorai.011G091300 Gossypium raimondii HOM05D007702 ORTHO05D009736 3.8e-10 68.9 88 46.6
Dinv37777 Davidia involucrata HOM05D000532 ORTHO05D002745 8.4e-10 67.8 36 75.0
FAN10G3703 Fragaria x ananassa HOM05D007702 ORTHO05D009736 2.1e-08 63.2 102 39.2
EL10Ac3g06847 Beta vulgaris HOM05D000495 ORTHO05D009736 2.5e-06 56.2 107 33.6
FAN02G1843 Fragaria x ananassa HOM05D007702 ORTHO05D009736 5.6e-06 55.1 39 61.5


User provided reference genes

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