Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG3G5030 Aethionema arabicum HOM05D006689 ORTHO05D008349 1.5e-206 722.6 363 100.0
AL3G23170 Arabidopsis lyrata HOM05D006689 ORTHO05D008349 5.0e-162 574.7 353 83.6
Carub.0003s1094 Capsella rubella HOM05D006689 ORTHO05D008349 2.6e-158 562.4 362 79.3
BcaB04g18654 Brassica carinata HOM05D006689 ORTHO05D008349 7.5e-158 560.8 355 80.3
A03p37220 Brassica napus HOM05D006689 ORTHO05D008349 2.8e-157 558.9 363 77.7
Thhalv10021180m.g Eutrema salsugineum HOM05D006689 ORTHO05D008349 4.2e-153 545.0 313 86.6
CARHR086170 Cardamine hirsuta HOM05D006689 ORTHO05D008349 1.4e-151 540.0 311 86.5
Sp3g09850 Schrenkiella parvula HOM05D006689 ORTHO05D008349 3.4e-150 535.4 312 84.0
BcaC01g04099 Brassica carinata HOM05D006689 ORTHO05D008349 1.4e-148 530.0 310 83.2
BraA03t12881Z Brassica rapa HOM05D006689 ORTHO05D008349 1.3e-146 523.5 304 84.5
A05p37720 Brassica napus HOM05D006689 ORTHO05D008349 1.1e-145 520.4 325 80.9
C03p45070 Brassica napus HOM05D006689 ORTHO05D008349 1.1e-145 520.4 316 81.0
C05p56320 Brassica napus HOM05D006689 ORTHO05D008349 2.1e-144 516.2 313 82.4
AT3G11620 Arabidopsis thaliana HOM05D006689 ORTHO05D008349 8.0e-144 514.2 288 88.5
BraA05t22567Z Brassica rapa HOM05D006689 ORTHO05D008349 8.9e-143 510.8 307 82.7
BolC5t34296H Brassica oleracea HOM05D006689 ORTHO05D008349 7.8e-139 497.7 288 85.4
BcaB06g25602 Brassica carinata HOM05D006689 ORTHO05D008349 7.3e-137 491.1 317 77.9
BcaC05g29349 Brassica carinata HOM05D006689 ORTHO05D008349 3.5e-131 472.2 285 82.5
Psat3g030240 Pisum sativum HOM05D006689 ORTHO05D008349 1.4e-119 433.7 321 62.9
Lj1g0003895 Lotus japonicus HOM05D006689 ORTHO05D008349 1.1e-116 424.1 344 60.2
TPR.G23318 Trifolium pratense HOM05D006689 ORTHO05D008349 1.9e-116 423.3 318 64.2
TWI74G1155 Tripterygium wilfordii HOM05D006689 ORTHO05D008349 3.2e-116 422.5 325 62.8
Atru.chr8.1397 Acer truncatum HOM05D006689 ORTHO05D008349 4.1e-116 422.2 300 66.7
Eucgr.A02606 Eucalyptus grandis HOM05D006689 ORTHO05D008349 5.4e-116 421.8 293 64.8
PGR004G2039 Punica granatum HOM05D006689 ORTHO05D008349 2.1e-115 419.9 294 65.3
MD14G1035800 Malus domestica HOM05D006689 ORTHO05D008349 4.6e-115 418.7 322 61.8
TAR633G1471 Trochodendron aralioides HOM05D006689 ORTHO05D008349 6.0e-115 418.3 327 60.6
Hma1.2p1_0064F.1_g034840 Hydrangea macrophylla HOM05D006689 ORTHO05D008349 3.0e-114 416.0 294 67.3
Aqoxy4G02685 Aquilegia oxysepala HOM05D006689 ORTHO05D008349 3.9e-114 415.6 322 62.1
QL07p037495 Quercus lobata HOM05D006689 ORTHO05D008349 8.6e-114 414.5 319 64.6
Potri.016G072700 Populus trichocarpa HOM05D006689 ORTHO05D008349 2.5e-113 412.9 305 65.2
Duzib106G1273 Durio zibethinus HOM05D006689 ORTHO05D008349 3.3e-113 412.5 325 62.2
CANSAT64G2446 Cannabis sativa HOM05D006689 ORTHO05D008349 5.6e-113 411.8 331 61.6
FvH4_6g19910 Fragaria vesca HOM05D006689 ORTHO05D008349 6.2e-112 408.3 300 63.3
Lalb_Chr01g0017911 Lupinus albus HOM05D006689 ORTHO05D008349 8.1e-112 407.9 302 63.6
GSVIVG01033928001 Vitis vinifera HOM05D006689 ORTHO05D008349 4.0e-111 405.6 307 60.6
Lalb_Chr20g0111471 Lupinus albus HOM05D006689 ORTHO05D008349 5.2e-111 405.2 300 64.3
Cpa.g.sc104.62 Carica papaya HOM05D006689 ORTHO05D008349 6.8e-111 404.8 344 59.0
CSS0035173 Camellia sinensis var. sinensis HOM05D006689 ORTHO05D008349 2.0e-110 403.3 302 63.2
Actinidia32058 Actinidia chinensis HOM05D006689 ORTHO05D008349 3.4e-110 402.5 313 60.7
Prupe.7G098300 Prunus persica HOM05D006689 ORTHO05D008349 9.9e-110 401.0 327 61.8
Sc07g0005680 Simmondsia chinensis HOM05D006689 ORTHO05D008349 2.9e-109 399.4 302 62.6
Cc06_g06350 Coffea canephora HOM05D006689 ORTHO05D008349 4.9e-109 398.7 303 60.7
Gorai.009G398000 Gossypium raimondii HOM05D006689 ORTHO05D008349 6.4e-109 398.3 331 57.4
QL07p037513 Quercus lobata HOM05D006689 ORTHO05D008349 3.0e-106 389.4 297 62.0
CiPaw.09G018700 Carya illinoinensis HOM05D006689 ORTHO05D008349 3.9e-106 389.0 318 59.1
PSO384G4437 Papaver somniferum HOM05D006689 ORTHO05D008349 3.9e-106 389.0 303 57.8
PSO339G4581 Papaver somniferum HOM05D006689 ORTHO05D008349 3.3e-105 386.0 303 57.4
Ciclev10011965m.g Citrus clementina HOM05D006689 ORTHO05D008349 1.2e-104 384.0 347 54.5
Nn6g34760 Nelumbo nucifera HOM05D006689 ORTHO05D008349 1.2e-104 384.0 316 59.2
MD12G1034600 Malus domestica HOM05D006689 ORTHO05D008349 2.1e-104 383.3 281 66.5
FAN14G3242 Fragaria x ananassa HOM05D006689 ORTHO05D008349 2.8e-104 382.9 300 60.7
Sopen01g003330 Solanum pennellii HOM05D006689 ORTHO05D008349 6.2e-104 381.7 311 57.6
FAN02G4476 Fragaria x ananassa HOM05D006689 ORTHO05D008349 8.1e-104 381.3 323 57.3
CsaV3_6G040970 Cucumis sativus L. HOM05D006689 ORTHO05D008349 1.1e-103 380.9 299 57.2
Cfa016668 Carpinus fangiana HOM05D006689 ORTHO05D008349 4.0e-103 379.0 302 59.9
Solyc01g007790.4 Solanum lycopersicum HOM05D006689 ORTHO05D008349 6.9e-103 378.3 323 55.7
DCAR_013430 Daucus carota HOM05D006689 ORTHO05D008349 2.9e-101 372.9 329 55.6
FAN05G1672 Fragaria x ananassa HOM05D006689 ORTHO05D008349 1.1e-100 370.9 300 59.0
Oeu017715.1 Olea europaea HOM05D006689 ORTHO05D008349 2.4e-100 369.8 326 56.1
HanXRQChr13g0398201 Helianthus annuus HOM05D006689 ORTHO05D008349 2.3e-98 363.2 303 56.1
Phvul.001G194040 Phaseolus vulgaris HOM05D006689 ORTHO05D008349 1.5e-97 360.5 270 63.7
arahy.Tifrunner.gnm1.ann1.YAPI8V Arachis hypogaea HOM05D006689 ORTHO05D008349 3.3e-97 359.4 321 53.9
Zm00001eb362600 Zea mays HOM05D006689 ORTHO05D008349 3.6e-96 355.9 289 58.1
Sed0011891 Sechium edule HOM05D006689 ORTHO05D008349 4.0e-95 352.4 261 62.8
MBI17_g00993_MAGBIO Magnolia biondii HOM05D006689 ORTHO05D008349 2.0e-94 350.1 310 55.8
Rhsim03G0067100 Rhododendron simsii HOM05D006689 ORTHO05D008349 1.3e-93 347.4 470 42.6
ECA233G1524 Erigeron canadensis HOM05D006689 ORTHO05D008349 3.8e-93 345.9 278 57.6
HPP92_023075 Vanilla planifolia HOM05D006689 ORTHO05D008349 6.4e-93 345.1 331 52.9
SEGI_26711 Sequoiadendron giganteum HOM05D006689 ORTHO05D008349 1.9e-92 343.6 300 53.7
ClCG04G010350 Citrullus lanatus HOM05D006689 ORTHO05D008349 9.3e-92 341.3 299 54.2
Nitab4.5_0000665g0040 Nicotiana tabacum HOM05D006689 ORTHO05D008349 1.6e-91 340.5 305 54.1
Medtr7g105800 Medicago truncatula HOM05D006689 ORTHO05D008349 1.8e-90 337.0 237 65.4
FAN09G0196 Fragaria x ananassa HOM05D006689 ORTHO05D008349 1.1e-89 334.3 392 45.7
ATR0772G132 Amborella trichopoda HOM05D006689 ORTHO05D008349 2.4e-87 326.6 256 60.5
Haze_19679 Corylus avellana HOM05D006689 ORTHO05D008349 4.0e-87 325.9 340 51.2
Peaxi162Scf00419g00069 Petunia axillaris HOM05D006689 ORTHO05D008349 4.0e-87 325.9 313 52.1
arahy.Tifrunner.gnm1.ann1.ZIE5B9 Arachis hypogaea HOM05D006689 ORTHO05D008349 1.7e-85 320.5 321 49.8
RcHm_v2.0_Chr3g0475311 Rosa chinensis HOM05D006689 ORTHO05D008349 1.7e-85 320.5 233 63.5
Sabra16G0075500 Salix brachista HOM05D006689 ORTHO05D008349 5.5e-84 315.5 346 49.4
Migut.L01819 Erythranthe guttata HOM05D006689 ORTHO05D008349 9.3e-84 314.7 236 61.9
Lsat_1_v5_gn_6_35180 Lactuca sativa HOM05D006689 ORTHO05D008349 3.5e-83 312.8 279 53.4
Gohir.D04G095300 Gossypium hirsutum HOM05D006689 ORTHO05D008349 1.8e-82 310.5 238 60.5
FAN05G0890 Fragaria x ananassa HOM05D006689 ORTHO05D008349 8.7e-82 308.1 267 56.2
Pp3c13_7330 Physcomitrium patens HOM05D006689 ORTHO05D008349 2.5e-81 306.6 292 50.3
Manes.09G048600 Manihot esculenta HOM05D006689 ORTHO05D008349 1.4e-76 290.8 220 65.5
Nitab4.5_0000020g0370 Nicotiana tabacum HOM05D006689 ORTHO05D008349 4.6e-75 285.8 236 55.5
SalBow5G2063 Salvia bowleyana HOM05D006689 ORTHO05D008349 5.7e-73 278.9 326 46.9
SMO272G0021 Selaginella moellendorffii HOM05D006689 ORTHO05D008349 8.5e-69 265.0 284 45.1
Hma1.2p1_0064F.1_g034850 Hydrangea macrophylla HOM05D006689 ORTHO05D008349 1.1e-68 264.6 200 64.5
Thecc.05G100700 Theobroma cacao HOM05D006689 ORTHO05D008349 2.7e-67 260.0 203 61.6
CAN.G574.36 Capsicum annuum HOM05D006689 ORTHO05D008349 4.6e-67 259.2 210 57.1
SMO165G0131 Selaginella moellendorffii HOM05D006689 ORTHO05D008349 8.2e-64 248.4 313 41.2
BolC3t16769H Brassica oleracea HOM05D006689 ORTHO05D008349 2.3e-58 230.3 129 84.5
MELO3C024575.2 Cucumis melo HOM05D006689 ORTHO05D008349 1.5e-54 217.6 347 38.9
CDE02G4301 Ceratophyllum demersum HOM05D006689 ORTHO05D008349 1.3e-53 214.5 173 60.1
Hund19873 Selenicereus undatus HOM05D006689 ORTHO05D008349 1.3e-53 214.5 319 42.3
Glyma.03G200300 Glycine max HOM05D006689 ORTHO05D008349 1.7e-53 214.2 145 67.6
AUR62037035 Chenopodium quinoa HOM05D006689 ORTHO05D008349 2.1e-51 207.2 194 52.6
EL10Ac7g16816 Beta vulgaris HOM05D006689 ORTHO05D008349 2.6e-49 200.3 143 62.9
AUR62006266 Chenopodium quinoa HOM05D006689 ORTHO05D008349 3.3e-49 199.9 194 50.5
Glyma.19G197900 Glycine max HOM05D006689 ORTHO05D008349 1.5e-44 184.5 302 34.4
PGSC0003DMG400016416 Solanum tuberosum HOM05D006689 ORTHO05D008349 1.5e-44 184.5 147 55.8
vmacro07460 Vaccinium macrocarpon HOM05D006689 ORTHO05D008349 4.0e-42 176.4 427 31.4
Gohir.A04G061585 Gossypium hirsutum HOM05D006689 ORTHO05D008349 1.5e-41 174.5 160 53.1
unitig_22.g6018 Utricularia gibba HOM05D006689 ORTHO05D008349 7.5e-41 172.2 224 37.5
Gohir.A04G061300 Gossypium hirsutum HOM05D006689 ORTHO05D008349 2.2e-40 170.6 101 70.3
Aa31LG3G5020 Aethionema arabicum HOM05D006689 ORTHO05D008349 4.2e-36 156.4 85 82.4
SGA_v2.0_scaffold184G40008 Striga asiatica HOM05D006689 ORTHO05D008349 4.4e-33 146.4 99 61.6
COL.COLO4_29616 Corchorus olitorius HOM05D006689 ORTHO05D008349 1.8e-31 141.0 82 72.0
Actinidia03903 Actinidia chinensis HOM05D006689 ORTHO05D008349 3.6e-27 126.7 138 51.4
CDE02G1185 Ceratophyllum demersum HOM05D006689 ORTHO05D008349 1.0e-26 125.2 95 54.7
Ah.08g210180 Amaranthus hybridus HOM05D006689 ORTHO05D008349 8.9e-26 122.1 72 72.2
MCO04G525 Micromonas commoda HOM05D006689 ORTHO05D008349 1.3e-24 118.2 284 28.9
Cre09.g388319 Chlamydomonas reinhardtii HOM05D006689 ORTHO05D008349 4.5e-22 109.8 330 28.2
PRCOL_00001274 Prasinoderma coloniale HOM05D006689 ORTHO05D008349 1.1e-20 105.1 290 28.6
RcHm_v2.0_Chr3g0475321 Rosa chinensis HOM05D006689 ORTHO05D008349 1.3e-16 91.7 75 58.7
Hma1.2p1_1624F.1_g294270 Hydrangea macrophylla HOM05D000554 ORTHO05D000860 1.2e-09 68.6 44 68.2
Sabra16G0075600 Salix brachista HOM05D006689 ORTHO05D008349 1.7e-08 64.7 46 58.7
Cfa021542 Carpinus fangiana HOM05D000750 ORTHO05D011662 4.9e-08 63.2 44 68.2
Ca_12392_v3 Cicer arietinum L. HOM05D000112 ORTHO05D023238 3.5e-06 57.0 49 57.1


User provided reference genes

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