Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG3G4540 Aethionema arabicum HOM05D000553 ORTHO05D017234 4.8e-57 224.2 106 100.0
THA.LOC104826855 Tarenaya hassleriana HOM05D000553 ORTHO05D000460 3.8e-09 65.1 32 84.4
Thhalv10021761m.g Eutrema salsugineum HOM05D000553 ORTHO05D000460 1.1e-08 63.5 32 84.4
Thecc.10G020500 Theobroma cacao HOM05D000553 ORTHO05D000460 1.4e-08 63.2 32 78.1
Cpa.g.sc19.186 Carica papaya HOM05D000553 ORTHO05D000460 1.9e-08 62.8 32 78.1
Gohir.A13G015800 Gossypium hirsutum HOM05D000553 ORTHO05D000460 1.9e-08 62.8 32 78.1
Sp3g09510 Schrenkiella parvula HOM05D000553 ORTHO05D000460 1.9e-08 62.8 32 81.2
THA.LOC104816552 Tarenaya hassleriana HOM05D000553 ORTHO05D000460 1.9e-08 62.8 32 84.4
TWI73G0316 Tripterygium wilfordii HOM05D000553 ORTHO05D000460 1.9e-08 62.8 32 81.2
Sp4g22420 Schrenkiella parvula HOM05D000553 ORTHO05D000460 2.4e-08 62.4 32 75.0
Ciclev10033070m.g Citrus clementina HOM05D000553 ORTHO05D000460 3.2e-08 62.0 32 78.1
BcaB06g25637 Brassica carinata HOM05D000553 ORTHO05D000460 4.1e-08 61.6 32 78.1
Cfa001329 Carpinus fangiana HOM05D000553 ORTHO05D000460 4.1e-08 61.6 32 75.0
CiPaw.01G297500 Carya illinoinensis HOM05D000553 ORTHO05D000460 4.1e-08 61.6 32 75.0
Haze_17215 Corylus avellana HOM05D000553 ORTHO05D000460 4.1e-08 61.6 32 75.0
HanXRQChr08g0222131 Helianthus annuus HOM05D000553 ORTHO05D000460 4.1e-08 61.6 32 78.1
AT3G11230 Arabidopsis thaliana HOM05D000553 ORTHO05D000460 5.4e-08 61.2 32 78.1
PGR044G0199 Punica granatum HOM05D000553 ORTHO05D000460 5.4e-08 61.2 32 75.0
BcaC05g29391 Brassica carinata HOM05D000553 ORTHO05D000460 7.1e-08 60.8 32 78.1
A05p38070 Brassica napus HOM05D000553 ORTHO05D000460 7.1e-08 60.8 32 78.1
C05p56860 Brassica napus HOM05D000553 ORTHO05D000460 7.1e-08 60.8 32 78.1
BolC5t34350H Brassica oleracea HOM05D000553 ORTHO05D000460 7.1e-08 60.8 32 78.1
BraA05t22599Z Brassica rapa HOM05D000553 ORTHO05D000460 7.1e-08 60.8 32 78.1
Medtr3g070330 Medicago truncatula HOM05D000553 ORTHO05D000460 7.1e-08 60.8 32 78.1
Nn2g11461 Nelumbo nucifera HOM05D000553 ORTHO05D000460 7.1e-08 60.8 32 71.9
Rhsim09G0176700 Rhododendron simsii HOM05D000553 ORTHO05D000460 7.1e-08 60.8 32 75.0
RcHm_v2.0_Chr1g0370001 Rosa chinensis HOM05D000553 ORTHO05D000460 7.1e-08 60.8 32 75.0
CSS0040155 Camellia sinensis var. sinensis HOM05D000553 ORTHO05D000460 9.2e-08 60.5 32 75.0
CANSAT56G1463 Cannabis sativa HOM05D000553 ORTHO05D000460 9.2e-08 60.5 32 75.0
CANSAT56G3951 Cannabis sativa HOM05D000553 ORTHO05D000460 9.2e-08 60.5 32 75.0
HanXRQChr12g0370521 Helianthus annuus HOM05D000553 ORTHO05D000460 9.2e-08 60.5 32 75.0
Ah.16g103430 Amaranthus hybridus HOM05D000553 ORTHO05D000460 1.6e-07 59.7 32 75.0
AL3G22750 Arabidopsis lyrata HOM05D000553 ORTHO05D000460 1.6e-07 59.7 32 75.0
ECA233G6106 Erigeron canadensis HOM05D000553 ORTHO05D000460 1.6e-07 59.7 32 75.0
MD01G1132600 Malus domestica HOM05D000553 ORTHO05D000460 1.6e-07 59.7 32 71.9
CSS0025442 Camellia sinensis var. sinensis HOM05D000553 ORTHO05D000460 2.1e-07 59.3 32 71.9
Ca_15269_v3 Cicer arietinum L. HOM05D000553 ORTHO05D003668 2.1e-07 59.3 32 75.0
Gohir.D13G016900 Gossypium hirsutum HOM05D000553 ORTHO05D000460 2.1e-07 59.3 32 75.0
Atru.chr12.20 Acer truncatum HOM05D000553 ORTHO05D000460 2.7e-07 58.9 32 71.9
BcaC09g48161 Brassica carinata HOM05D000553 ORTHO05D000460 2.7e-07 58.9 32 75.0
BolC1t05326H Brassica oleracea HOM05D000553 ORTHO05D000460 2.7e-07 58.9 32 75.0
BraA01t04193Z Brassica rapa HOM05D000553 ORTHO05D000460 2.7e-07 58.9 32 75.0
CARHR085790 Cardamine hirsuta HOM05D000553 ORTHO05D000460 2.7e-07 58.9 32 81.2
MD07G1220400 Malus domestica HOM05D000553 ORTHO05D000460 2.7e-07 58.9 32 71.9
AUR62022869 Chenopodium quinoa HOM05D000553 ORTHO05D000460 3.5e-07 58.5 45 57.8
Sc10g0002290 Simmondsia chinensis HOM05D000553 ORTHO05D000460 3.5e-07 58.5 32 75.0
BcaB04g21142 Brassica carinata HOM05D000553 ORTHO05D000460 4.6e-07 58.2 32 75.0
CiPaw.02G191700 Carya illinoinensis HOM05D000553 ORTHO05D000460 4.6e-07 58.2 32 75.0
DCAR_011805 Daucus carota HOM05D000553 ORTHO05D000460 4.6e-07 58.2 32 71.9
Thhalv10017415m.g Eutrema salsugineum HOM05D000553 ORTHO05D000460 4.6e-07 58.2 32 71.9
Gorai.013G018700 Gossypium raimondii HOM05D000553 ORTHO05D000460 4.6e-07 58.2 32 71.9
LjContig00357g0010180 Lotus japonicus HOM05D000553 ORTHO05D000460 4.6e-07 58.2 32 68.8
Duzib114G0020 Durio zibethinus HOM05D000553 ORTHO05D000460 6.0e-07 57.8 32 71.9
Manes.07G128400 Manihot esculenta HOM05D000553 ORTHO05D000460 6.0e-07 57.8 32 71.9
Hund15946 Selenicereus undatus HOM05D000553 ORTHO05D000460 6.0e-07 57.8 32 71.9
TPR.G2519 Trifolium pratense HOM05D000553 ORTHO05D000460 6.0e-07 57.8 32 71.9
Duzib106G1055 Durio zibethinus HOM05D000553 ORTHO05D000460 7.8e-07 57.4 32 68.8
Lsat_1_v5_gn_8_12320 Lactuca sativa HOM05D000553 ORTHO05D000460 7.8e-07 57.4 32 71.9
Nitab4.5_0002330g0120 Nicotiana tabacum HOM05D000553 ORTHO05D000460 7.8e-07 57.4 32 65.6
Os03g0698500 Oryza sativa ssp. japonica HOM05D000553 ORTHO05D020606 7.8e-07 57.4 37 56.8
Prupe.2G248800 Prunus persica HOM05D000553 ORTHO05D000460 7.8e-07 57.4 32 68.8
TWI09G1557 Tripterygium wilfordii HOM05D000553 ORTHO05D000460 7.8e-07 57.4 32 71.9
TAR623G0400 Trochodendron aralioides HOM05D000553 ORTHO05D000460 7.8e-07 57.4 32 65.6
arahy.Tifrunner.gnm1.ann1.5I106H Arachis hypogaea HOM05D000553 ORTHO05D000460 1.0e-06 57.0 32 65.6
arahy.Tifrunner.gnm1.ann1.7A6EAY Arachis hypogaea HOM05D000553 ORTHO05D000460 1.0e-06 57.0 32 65.6
BcaC01g04134 Brassica carinata HOM05D000553 ORTHO05D000460 1.0e-06 57.0 32 75.0
A03p36990 Brassica napus HOM05D000553 ORTHO05D000460 1.0e-06 57.0 32 75.0
C03p44780 Brassica napus HOM05D000553 ORTHO05D000460 1.0e-06 57.0 32 75.0
BolC3t16741H Brassica oleracea HOM05D000553 ORTHO05D000460 1.0e-06 57.0 32 75.0
BraA03t12861Z Brassica rapa HOM05D000553 ORTHO05D000460 1.0e-06 57.0 32 75.0
ClCG07G004100 Citrullus lanatus HOM05D000553 ORTHO05D017234 1.0e-06 57.0 32 68.8
Dinv17982 Davidia involucrata HOM05D000553 ORTHO05D000460 1.0e-06 57.0 32 71.9
FvH4_7g24340 Fragaria vesca HOM05D000553 ORTHO05D000460 1.0e-06 57.0 32 71.9
FAN01G1959 Fragaria x ananassa HOM05D000553 ORTHO05D000460 1.0e-06 57.0 32 71.9
FAN03G2890 Fragaria x ananassa HOM05D000553 ORTHO05D000460 1.0e-06 57.0 32 71.9
FAN06G1361 Fragaria x ananassa HOM05D000553 ORTHO05D000460 1.0e-06 57.0 32 71.9
Lalb_Chr10g0105121 Lupinus albus HOM05D000553 ORTHO05D000460 1.0e-06 57.0 32 71.9
THA.LOC104810094 Tarenaya hassleriana HOM05D000553 ORTHO05D000460 1.0e-06 57.0 32 68.8
THA.LOC104810097 Tarenaya hassleriana HOM05D000553 ORTHO05D000460 1.0e-06 57.0 32 68.8
Actinidia13931 Actinidia chinensis HOM05D000553 ORTHO05D000460 1.3e-06 56.6 32 71.9
arahy.Tifrunner.gnm1.ann1.F9T2J1 Arachis hypogaea HOM05D000553 ORTHO05D000460 1.3e-06 56.6 32 65.6
Nitab4.5_0005017g0040 Nicotiana tabacum HOM05D000553 ORTHO05D000460 1.3e-06 56.6 40 57.5
Hund13849 Selenicereus undatus HOM05D000553 ORTHO05D000460 1.3e-06 56.6 32 71.9
Sc11g0005000 Simmondsia chinensis HOM05D000553 ORTHO05D000460 1.3e-06 56.6 32 68.8
Solyc07g062880.3 Solanum lycopersicum HOM05D000553 ORTHO05D000460 1.3e-06 56.6 32 71.9
Sopen07g031080 Solanum pennellii HOM05D000553 ORTHO05D000460 1.3e-06 56.6 32 71.9
Aa31LG5G19490 Aethionema arabicum HOM05D000553 ORTHO05D000460 1.7e-06 56.2 32 68.8
AL4G37760 Arabidopsis lyrata HOM05D000553 ORTHO05D000460 1.7e-06 56.2 32 68.8
AT2G40110 Arabidopsis thaliana HOM05D000553 ORTHO05D000460 1.7e-06 56.2 32 68.8
arahy.Tifrunner.gnm1.ann1.K8NNXW Arachis hypogaea HOM05D000553 ORTHO05D000460 1.7e-06 56.2 32 65.6
BcaC02g07353 Brassica carinata HOM05D000553 ORTHO05D000460 1.7e-06 56.2 32 68.8
A04p30060 Brassica napus HOM05D000553 ORTHO05D000460 1.7e-06 56.2 32 68.8
C04p67790 Brassica napus HOM05D000553 ORTHO05D003668 1.7e-06 56.2 32 68.8
BolC4t28283H Brassica oleracea HOM05D000553 ORTHO05D003668 1.7e-06 56.2 32 68.8
BraA04t18500Z Brassica rapa HOM05D000553 ORTHO05D000460 1.7e-06 56.2 32 68.8
Carub.0004s2228 Capsella rubella HOM05D000553 ORTHO05D000460 1.7e-06 56.2 32 68.8
MELO3C008289.2 Cucumis melo HOM05D000553 ORTHO05D000460 1.7e-06 56.2 32 68.8
CsaV3_6G001750 Cucumis sativus L. HOM05D000553 ORTHO05D000460 1.7e-06 56.2 32 68.8
Manes.10G013800 Manihot esculenta HOM05D000553 ORTHO05D000460 1.7e-06 56.2 32 68.8
Sabra08G0049300 Salix brachista HOM05D000553 ORTHO05D000460 1.7e-06 56.2 33 66.7
BcaB06g29128 Brassica carinata HOM05D000553 ORTHO05D000460 2.3e-06 55.8 32 68.8
CARHR135080 Cardamine hirsuta HOM05D000553 ORTHO05D000460 2.3e-06 55.8 32 68.8
MELO3C025175.2 Cucumis melo HOM05D000553 ORTHO05D000460 2.3e-06 55.8 32 65.6
Lj6g0002024 Lotus japonicus HOM05D000553 ORTHO05D000460 2.3e-06 55.8 32 65.6
Lalb_Chr03g0043181 Lupinus albus HOM05D000553 ORTHO05D020606 2.3e-06 55.8 37 56.8
Lalb_Chr04g0250621 Lupinus albus HOM05D000553 ORTHO05D000460 2.3e-06 55.8 32 68.8
Lalb_Chr17g0346741 Lupinus albus HOM05D000553 ORTHO05D000460 2.3e-06 55.8 32 68.8
MBI05_g34497_MAGBIO Magnolia biondii HOM05D000553 ORTHO05D000460 2.3e-06 55.8 32 68.8
Phvul.008G224700 Phaseolus vulgaris HOM05D000553 ORTHO05D000460 2.3e-06 55.8 32 68.8
vmacro22160 Vaccinium macrocarpon HOM05D000553 ORTHO05D000460 2.3e-06 55.8 33 69.7
VMungo0647G1232 Vigna mungo HOM05D000553 ORTHO05D000460 2.3e-06 55.8 32 68.8
GSVIVG01032842001 Vitis vinifera HOM05D000553 ORTHO05D000460 2.3e-06 55.8 32 68.8
Carub.0003s1054 Capsella rubella HOM05D000553 ORTHO05D000460 3.0e-06 55.5 32 71.9
FAN10G3202 Fragaria x ananassa HOM05D000553 ORTHO05D000460 3.0e-06 55.5 32 71.9
HanXRQChr07g0202921 Helianthus annuus HOM05D000553 ORTHO05D000460 3.0e-06 55.5 32 71.9
Sed0019405 Sechium edule HOM05D000553 ORTHO05D000460 3.0e-06 55.5 32 68.8
Actinidia20728 Actinidia chinensis HOM05D000553 ORTHO05D000460 3.9e-06 55.1 32 65.6
ClCG11G006240 Citrullus lanatus HOM05D000553 ORTHO05D000460 3.9e-06 55.1 32 65.6
Haze_09454 Corylus avellana HOM05D007892 ORTHO05D009211 3.9e-06 55.1 37 62.2
Dinv34394 Davidia involucrata HOM05D000553 ORTHO05D000460 3.9e-06 55.1 32 68.8
MBI14_g29548_MAGBIO Magnolia biondii HOM05D000553 ORTHO05D000460 3.9e-06 55.1 32 71.9
Medtr5g082490 Medicago truncatula HOM05D000553 ORTHO05D000460 3.9e-06 55.1 32 68.8
Peaxi162Scf00825g00027 Petunia axillaris HOM05D000553 ORTHO05D000460 3.9e-06 55.1 32 68.8
SalBow6G6998 Salvia bowleyana HOM05D000162 ORTHO05D000090 3.9e-06 55.1 34 64.7
TAR636G2175 Trochodendron aralioides HOM05D000553 ORTHO05D000460 3.9e-06 55.1 32 68.8
TAR636G2882 Trochodendron aralioides HOM05D000553 ORTHO05D000460 3.9e-06 55.1 32 68.8
EL10Ac2g04816 Beta vulgaris HOM05D000553 ORTHO05D000460 5.1e-06 54.7 32 65.6
CsaV3_5G009020 Cucumis sativus L. HOM05D000553 ORTHO05D000460 5.1e-06 54.7 32 62.5
Migut.F01375 Erythranthe guttata HOM05D000553 ORTHO05D000460 5.1e-06 54.7 32 68.8
FAN09G0351 Fragaria x ananassa HOM05D000553 ORTHO05D000460 5.1e-06 54.7 31 67.7
Gohir.A05G329500 Gossypium hirsutum HOM05D000553 ORTHO05D000460 5.1e-06 54.7 32 65.6
Gohir.D04G067500 Gossypium hirsutum HOM05D000553 ORTHO05D000460 5.1e-06 54.7 32 65.6
Hma1.2p1_0281F.1_g113020 Hydrangea macrophylla HOM05D000553 ORTHO05D000460 5.1e-06 54.7 32 68.8
PSO339G3512 Papaver somniferum HOM05D000553 ORTHO05D000460 5.1e-06 54.7 32 62.5
PSO384G1946 Papaver somniferum HOM05D000553 ORTHO05D000460 5.1e-06 54.7 32 62.5
RcHm_v2.0_Chr3g0463261 Rosa chinensis HOM05D000553 ORTHO05D000460 5.1e-06 54.7 32 65.6
VMungo1383G2991 Vigna mungo HOM05D000553 ORTHO05D000460 5.1e-06 54.7 33 66.7
ATR0618G218 Amborella trichopoda HOM05D000553 ORTHO05D000460 6.6e-06 54.3 32 62.5
EL10Ac4g08235 Beta vulgaris HOM05D000553 ORTHO05D000460 6.6e-06 54.3 32 65.6
CAN.G213.19 Capsicum annuum HOM05D000553 ORTHO05D000460 6.6e-06 54.3 32 62.5
Potri.008G067100 Populus trichocarpa HOM05D000553 ORTHO05D000460 6.6e-06 54.3 32 65.6
PGSC0003DMG401012406 Solanum tuberosum HOM05D000553 ORTHO05D000460 6.6e-06 54.3 32 68.8
DCAR_013120 Daucus carota HOM05D000553 ORTHO05D000460 8.6e-06 53.9 32 62.5
Migut.L02006 Erythranthe guttata HOM05D000553 ORTHO05D000460 8.6e-06 53.9 32 65.6
FvH4_6g11560 Fragaria vesca HOM05D000553 ORTHO05D000460 8.6e-06 53.9 31 67.7
FAN02G3104 Fragaria x ananassa HOM05D000553 ORTHO05D000460 8.6e-06 53.9 31 67.7
FAN14G1246 Fragaria x ananassa HOM05D002813 ORTHO05D003203 8.6e-06 53.9 31 67.7
FAN14G3942 Fragaria x ananassa HOM05D000553 ORTHO05D000460 8.6e-06 53.9 31 67.7
Lj3g0009267 Lotus japonicus HOM05D000553 ORTHO05D000460 8.6e-06 53.9 32 62.5
Oeu033600.1 Olea europaea HOM05D000553 ORTHO05D000460 8.6e-06 53.9 32 62.5
PGR031G1145 Punica granatum HOM05D000553 ORTHO05D000460 8.6e-06 53.9 32 62.5
QL08p022801 Quercus lobata HOM05D000553 ORTHO05D000460 8.6e-06 53.9 32 62.5


User provided reference genes

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