Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG3G3770 Aethionema arabicum HOM05D004733 ORTHO05D005925 2.1e-64 248.8 120 100.0
Thhalv10024292m.g Eutrema salsugineum HOM05D004733 ORTHO05D005925 4.5e-51 204.5 113 89.4
AL2G11330 Arabidopsis lyrata HOM05D004733 ORTHO05D005925 6.5e-50 200.7 113 87.6
Sp7g34280 Schrenkiella parvula HOM05D004733 ORTHO05D005925 2.5e-49 198.7 113 86.7
AT1G63810 Arabidopsis thaliana HOM05D004733 ORTHO05D005925 1.2e-48 196.4 113 85.8
CARHR047390 Cardamine hirsuta HOM05D004733 ORTHO05D005925 2.7e-48 195.3 113 85.0
THA.LOC104809497 Tarenaya hassleriana HOM05D004733 ORTHO05D005925 6.1e-48 194.1 113 85.8
Carub.0002s0104 Capsella rubella HOM05D004733 ORTHO05D005925 1.8e-47 192.6 113 84.1
A08p22270 Brassica napus HOM05D004733 ORTHO05D005925 1.4e-44 183.0 113 77.9
BraA08t34186Z Brassica rapa HOM05D004733 ORTHO05D005925 1.4e-44 183.0 113 77.9
BcaC01g00457 Brassica carinata HOM05D004733 ORTHO05D005925 1.8e-44 182.6 113 78.8
C03p80050 Brassica napus HOM05D004733 ORTHO05D005925 1.8e-44 182.6 113 78.8
BolC3t20259H Brassica oleracea HOM05D004733 ORTHO05D005925 1.8e-44 182.6 113 78.8
QL04p047829 Quercus lobata HOM05D004733 ORTHO05D005925 7.4e-38 160.6 115 71.3
MD02G1146900 Malus domestica HOM05D004733 ORTHO05D005925 3.7e-37 158.3 113 71.7
Sabra07G0021700 Salix brachista HOM05D004733 ORTHO05D005925 6.3e-37 157.5 113 71.7
Gohir.D11G190600 Gossypium hirsutum HOM05D004733 ORTHO05D005925 8.2e-37 157.1 113 67.3
Gorai.007G203100 Gossypium raimondii HOM05D004733 ORTHO05D005925 8.2e-37 157.1 113 67.3
Cfa004311 Carpinus fangiana HOM05D004733 ORTHO05D005925 1.1e-36 156.8 113 69.9
Nn5g29624 Nelumbo nucifera HOM05D004733 ORTHO05D005925 1.1e-36 156.8 119 68.1
Potri.007G024600 Populus trichocarpa HOM05D004733 ORTHO05D005925 1.8e-36 156.0 115 68.7
GSVIVG01018952001 Vitis vinifera HOM05D004733 ORTHO05D005925 1.8e-36 156.0 113 69.9
Duzib187G1802 Durio zibethinus HOM05D004733 ORTHO05D005925 2.4e-36 155.6 113 65.5
Atru.chr3.583 Acer truncatum HOM05D004733 ORTHO05D005925 3.1e-36 155.2 113 69.0
Ciclev10024776m.g Citrus clementina HOM05D004733 ORTHO05D005925 4.1e-36 154.8 119 67.2
Gohir.A11G184100 Gossypium hirsutum HOM05D004733 ORTHO05D005925 7.0e-36 154.1 113 66.4
Prupe.7G155300 Prunus persica HOM05D004733 ORTHO05D005925 1.2e-35 153.3 113 70.8
Psat2g159520 Pisum sativum HOM05D004733 ORTHO05D005925 2.0e-35 152.5 113 67.3
arahy.Tifrunner.gnm1.ann1.VB3WEH Arachis hypogaea HOM05D004733 ORTHO05D005925 3.5e-35 151.8 113 66.4
Glyma.01G176400 Glycine max HOM05D004733 ORTHO05D005925 3.5e-35 151.8 111 69.4
arahy.Tifrunner.gnm1.ann1.6U5FTL Arachis hypogaea HOM05D004733 ORTHO05D005925 4.5e-35 151.4 113 65.5
Medtr5g020190 Medicago truncatula HOM05D004733 ORTHO05D005925 4.5e-35 151.4 113 65.5
Phvul.002G030700 Phaseolus vulgaris HOM05D004733 ORTHO05D005925 4.5e-35 151.4 111 68.5
TAR625G0290 Trochodendron aralioides HOM05D004733 ORTHO05D005925 4.5e-35 151.4 113 69.0
Ca_24849_v3 Cicer arietinum L. HOM05D004733 ORTHO05D005925 7.7e-35 150.6 113 64.6
QL02p065465 Quercus lobata HOM05D004733 ORTHO05D005925 7.7e-35 150.6 115 67.0
Lj1g0005862 Lotus japonicus HOM05D004733 ORTHO05D005925 1.0e-34 150.2 113 65.5
arahy.Tifrunner.gnm1.ann1.VZ5KK1 Arachis hypogaea HOM05D004733 ORTHO05D005925 1.3e-34 149.8 113 65.5
Sed0013525 Sechium edule HOM05D004733 ORTHO05D005925 1.3e-34 149.8 114 68.4
Actinidia36563 Actinidia chinensis HOM05D004733 ORTHO05D005925 1.7e-34 149.4 113 68.1
TPR.G22288 Trifolium pratense HOM05D004733 ORTHO05D005925 1.7e-34 149.4 113 66.4
CsaV3_6G008550 Cucumis sativus L. HOM05D004733 ORTHO05D005925 2.2e-34 149.1 114 67.5
Thecc.01G034700 Theobroma cacao HOM05D004733 ORTHO05D005925 2.2e-34 149.1 113 65.5
CANSAT78G0304 Cannabis sativa HOM05D004733 ORTHO05D005925 2.9e-34 148.7 113 68.1
Glyma.11G068600 Glycine max HOM05D004733 ORTHO05D005925 5.0e-34 147.9 111 67.6
Manes.02G094400 Manihot esculenta HOM05D004733 ORTHO05D005925 5.0e-34 147.9 115 66.1
Lalb_Chr16g0377811 Lupinus albus HOM05D004733 ORTHO05D005925 8.5e-34 147.1 113 64.6
Aqoxy6G01122 Aquilegia oxysepala HOM05D004733 ORTHO05D005925 1.1e-33 146.7 113 66.4
Eucgr.I02440 Eucalyptus grandis HOM05D004733 ORTHO05D005925 1.9e-33 146.0 115 65.2
FvH4_1g13250 Fragaria vesca HOM05D004733 ORTHO05D005925 2.5e-33 145.6 113 66.4
VMungo1215G0507 Vigna mungo HOM05D004733 ORTHO05D005925 2.5e-33 145.6 111 65.8
MELO3C022270.2 Cucumis melo HOM05D004733 ORTHO05D005925 3.2e-33 145.2 114 65.8
CSS0026274 Camellia sinensis var. sinensis HOM05D004733 ORTHO05D005925 4.2e-33 144.8 113 65.5
CiPaw.02G018200 Carya illinoinensis HOM05D004733 ORTHO05D005925 4.2e-33 144.8 115 65.2
CsaV3_5G036970 Cucumis sativus L. HOM05D004733 ORTHO05D005925 9.4e-33 143.7 114 65.8
MBI14_g08060_MAGBIO Magnolia biondii HOM05D004733 ORTHO05D005925 1.2e-32 143.3 119 62.2
Hma1.2p1_0789F.1_g218380 Hydrangea macrophylla HOM05D004733 ORTHO05D005925 2.7e-32 142.1 113 63.7
RcHm_v2.0_Chr2g0101431 Rosa chinensis HOM05D004733 ORTHO05D005925 2.7e-32 142.1 115 65.2
COL.COLO4_08906 Corchorus olitorius HOM05D004733 ORTHO05D005925 3.6e-32 141.7 113 61.1
vmacro15553 Vaccinium macrocarpon HOM05D004733 ORTHO05D005925 4.7e-32 141.4 118 61.9
Cpa.g.sc6.117 Carica papaya HOM05D004733 ORTHO05D005925 6.1e-32 141.0 127 60.6
Ah.03g140900 Amaranthus hybridus HOM05D004733 ORTHO05D005925 8.0e-32 140.6 113 62.8
MSTRG.23523 Avicennia marina HOM05D004733 ORTHO05D005925 8.0e-32 140.6 113 61.1
AUR62004057 Chenopodium quinoa HOM05D004733 ORTHO05D005925 1.0e-31 140.2 113 61.1
PGR119G1063 Punica granatum HOM05D004733 ORTHO05D005925 1.0e-31 140.2 115 63.5
Sc03g0003000 Simmondsia chinensis HOM05D004733 ORTHO05D005925 1.0e-31 140.2 113 61.9
QL06p046231 Quercus lobata HOM05D004733 ORTHO05D005925 1.4e-31 139.8 113 63.7
FAN23G1660 Fragaria x ananassa HOM05D004733 ORTHO05D005925 3.9e-31 138.3 113 61.9
ATR0665G204 Amborella trichopoda HOM05D004733 ORTHO05D005925 5.2e-31 137.9 119 58.8
SalBow2G0826 Salvia bowleyana HOM05D004733 ORTHO05D005925 5.2e-31 137.9 113 60.2
TWI77G0475 Tripterygium wilfordii HOM05D004733 ORTHO05D005925 5.2e-31 137.9 113 65.5
ClCG06G002580 Citrullus lanatus HOM05D004733 ORTHO05D005925 8.8e-31 137.1 114 62.3
FAN19G0915 Fragaria x ananassa HOM05D004733 ORTHO05D005925 8.8e-31 137.1 113 62.8
MD15G1261100 Malus domestica HOM05D004733 ORTHO05D005925 1.1e-30 136.7 113 63.7
FAN28G2014 Fragaria x ananassa HOM05D004733 ORTHO05D005925 2.0e-30 136.0 113 63.7
Hund16432 Selenicereus undatus HOM05D004733 ORTHO05D005925 3.3e-30 135.2 113 61.1
EL10Ac6g15557 Beta vulgaris HOM05D004733 ORTHO05D005925 4.4e-30 134.8 113 61.9
Dinv39990 Davidia involucrata HOM05D004733 ORTHO05D005925 5.7e-30 134.4 113 63.7
Zm00001eb139270 Zea mays HOM05D004733 ORTHO05D005925 1.7e-29 132.9 113 58.4
Oeu017201.1 Olea europaea HOM05D004733 ORTHO05D005925 2.8e-29 132.1 113 59.3
SEGI_33720 Sequoiadendron giganteum HOM05D004733 ORTHO05D005925 1.8e-28 129.4 117 57.3
SEGI_35015 Sequoiadendron giganteum HOM05D004733 ORTHO05D005925 1.8e-28 129.4 117 57.3
Solyc02g085230.3 Solanum lycopersicum HOM05D004733 ORTHO05D005925 1.8e-28 129.4 113 61.1
Sopen02g029930 Solanum pennellii HOM05D004733 ORTHO05D005925 1.8e-28 129.4 113 61.1
A05p29530 Brassica napus HOM05D004733 ORTHO05D005925 3.1e-28 128.6 111 61.3
A05p29760 Brassica napus HOM05D004733 ORTHO05D005925 3.1e-28 128.6 111 61.3
Migut.H00986 Erythranthe guttata HOM05D004733 ORTHO05D005925 3.1e-28 128.6 113 58.4
PSO541G3573 Papaver somniferum HOM05D004733 ORTHO05D005925 7.0e-28 127.5 113 60.2
CDE02G4373 Ceratophyllum demersum HOM05D004733 ORTHO05D005925 1.6e-27 126.3 119 52.1
PSO675G5282 Papaver somniferum HOM05D004733 ORTHO05D005925 2.6e-27 125.6 113 59.3
DCAR_017293 Daucus carota HOM05D004733 ORTHO05D005925 3.5e-27 125.2 113 55.8
AUR62007571 Chenopodium quinoa HOM05D004733 ORTHO05D005925 4.5e-27 124.8 146 47.9
Rhsim02G0060300 Rhododendron simsii HOM05D004733 ORTHO05D005925 4.5e-27 124.8 147 49.0
Lj4A201T52 Lonicera japonica HOM05D004733 ORTHO05D005925 7.7e-27 124.0 113 55.8
Cc03_g11520 Coffea canephora HOM05D004733 ORTHO05D005925 3.8e-26 121.7 113 55.8
HanXRQChr09g0261511 Helianthus annuus HOM05D004733 ORTHO05D005925 8.5e-26 120.6 111 54.1
ECA232G2226 Erigeron canadensis HOM05D004733 ORTHO05D005925 1.9e-25 119.4 111 54.1
unitig_21.g20953 Utricularia gibba HOM05D004733 ORTHO05D005925 1.9e-25 119.4 128 54.7
Nitab4.5_0001385g0060 Nicotiana tabacum HOM05D004733 ORTHO05D005925 5.5e-25 117.9 115 57.4
HPP92_009474 Vanilla planifolia HOM05D004733 ORTHO05D005925 2.1e-24 115.9 119 50.4
Lsat_1_v5_gn_4_152020 Lactuca sativa HOM05D004733 ORTHO05D005925 6.1e-24 114.4 114 52.6
Peaxi162Scf00366g00125 Petunia axillaris HOM05D004733 ORTHO05D005925 1.2e-22 110.2 115 54.8
CAN.G358.87 Capsicum annuum HOM05D004733 ORTHO05D005925 2.0e-22 109.4 114 53.5
CAN.G3433.1 Capsicum annuum HOM05D004733 ORTHO05D005925 3.3e-22 108.6 114 53.5
Haze_15084 Corylus avellana HOM05D004733 ORTHO05D005925 1.7e-21 106.3 75 69.3
Mapoly0060s0020 Marchantia polymorpha HOM05D004733 ORTHO05D005925 2.7e-19 99.0 113 42.5
Pp3c6_25920 Physcomitrium patens HOM05D004733 ORTHO05D005925 8.5e-18 94.0 113 42.5
Nitab4.5_0000178g0060 Nicotiana tabacum HOM05D004733 ORTHO05D005925 1.1e-17 93.6 120 49.2
AagrBONN_evm.TU.Sc2ySwM_228.918 Anthoceros agrestis HOM05D004733 ORTHO05D005925 3.2e-17 92.0 113 44.2
CBR_g37736 Chara braunii HOM05D004733 ORTHO05D000048 3.0e-15 85.5 115 41.7
SGA_v2.0_scaffold54G19532 Striga asiatica HOM05D004733 ORTHO05D005925 3.1e-12 75.5 116 41.4
MCO15G114 Micromonas commoda HOM05D004733 ORTHO05D005925 7.0e-12 74.3 107 36.4
Cre07.g332800 Chlamydomonas reinhardtii HOM05D004733 ORTHO05D005925 1.5e-09 66.6 102 39.2
C07p61790 Brassica napus HOM05D004733 ORTHO05D005925 9.5e-09 63.9 43 74.4
GSVIVG01024291001 Vitis vinifera HOM05D004733 ORTHO05D005925 3.4e-06 55.5 34 70.6


User provided reference genes

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