Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG3G3760 Aethionema arabicum HOM05D004733 ORTHO05D005925 8.8e-201 703.4 344 100.0
Sp7g34280 Schrenkiella parvula HOM05D004733 ORTHO05D005925 2.8e-170 602.1 350 83.4
Thhalv10024292m.g Eutrema salsugineum HOM05D004733 ORTHO05D005925 2.3e-169 599.0 350 82.9
Carub.0002s0104 Capsella rubella HOM05D004733 ORTHO05D005925 1.7e-167 592.8 350 82.6
AL2G11330 Arabidopsis lyrata HOM05D004733 ORTHO05D005925 4.9e-167 591.3 350 82.3
AT1G63810 Arabidopsis thaliana HOM05D004733 ORTHO05D005925 1.7e-164 582.8 350 80.6
CARHR047390 Cardamine hirsuta HOM05D004733 ORTHO05D005925 6.6e-164 580.9 350 80.0
A08p22270 Brassica napus HOM05D004733 ORTHO05D005925 4.0e-161 571.6 351 81.5
BraA08t34186Z Brassica rapa HOM05D004733 ORTHO05D005925 4.0e-161 571.6 351 81.5
BolC3t20259H Brassica oleracea HOM05D004733 ORTHO05D005925 3.4e-160 568.5 351 80.3
C03p80050 Brassica napus HOM05D004733 ORTHO05D005925 2.9e-159 565.5 351 80.1
THA.LOC104809497 Tarenaya hassleriana HOM05D004733 ORTHO05D005925 1.6e-157 559.7 350 77.7
QL04p047829 Quercus lobata HOM05D004733 ORTHO05D005925 3.6e-138 495.4 351 68.1
CiPaw.02G018200 Carya illinoinensis HOM05D004733 ORTHO05D005925 2.0e-136 489.6 352 68.2
Hma1.2p1_0789F.1_g218380 Hydrangea macrophylla HOM05D004733 ORTHO05D005925 6.4e-135 484.6 351 66.1
Gohir.A11G184100 Gossypium hirsutum HOM05D004733 ORTHO05D005925 2.4e-134 482.6 348 69.3
Gohir.D11G190600 Gossypium hirsutum HOM05D004733 ORTHO05D005925 5.4e-134 481.5 348 69.0
Ciclev10024776m.g Citrus clementina HOM05D004733 ORTHO05D005925 2.7e-133 479.2 351 65.8
FAN19G0915 Fragaria x ananassa HOM05D004733 ORTHO05D005925 3.5e-133 478.8 337 67.1
GSVIVG01018952001 Vitis vinifera HOM05D004733 ORTHO05D005925 4.6e-133 478.4 351 65.5
Cfa004311 Carpinus fangiana HOM05D004733 ORTHO05D005925 6.0e-133 478.0 351 66.1
Potri.007G024600 Populus trichocarpa HOM05D004733 ORTHO05D005925 6.0e-133 478.0 350 66.6
FAN23G1660 Fragaria x ananassa HOM05D004733 ORTHO05D005925 1.0e-132 477.2 337 66.8
Thecc.01G034700 Theobroma cacao HOM05D004733 ORTHO05D005925 1.0e-132 477.2 345 69.0
Gorai.007G203100 Gossypium raimondii HOM05D004733 ORTHO05D005925 3.9e-132 475.3 355 67.6
CSS0026274 Camellia sinensis var. sinensis HOM05D004733 ORTHO05D005925 5.1e-132 474.9 350 66.3
FAN28G2014 Fragaria x ananassa HOM05D004733 ORTHO05D005925 1.1e-131 473.8 342 66.4
Duzib187G1802 Durio zibethinus HOM05D004733 ORTHO05D005925 4.3e-131 471.9 345 67.8
FvH4_1g13250 Fragaria vesca HOM05D004733 ORTHO05D005925 5.6e-131 471.5 351 64.4
Prupe.7G155300 Prunus persica HOM05D004733 ORTHO05D005925 2.1e-130 469.5 351 65.0
Sabra07G0021700 Salix brachista HOM05D004733 ORTHO05D005925 2.1e-130 469.5 357 64.4
RcHm_v2.0_Chr2g0101431 Rosa chinensis HOM05D004733 ORTHO05D005925 3.7e-130 468.8 351 65.0
Dinv39990 Davidia involucrata HOM05D004733 ORTHO05D005925 6.2e-130 468.0 351 65.5
Atru.chr3.583 Acer truncatum HOM05D004733 ORTHO05D005925 8.1e-130 467.6 351 65.2
Manes.02G094400 Manihot esculenta HOM05D004733 ORTHO05D005925 4.5e-128 461.8 344 65.7
CANSAT78G0304 Cannabis sativa HOM05D004733 ORTHO05D005925 5.8e-128 461.5 351 63.0
BcaC01g00457 Brassica carinata HOM05D004733 ORTHO05D005925 1.3e-127 460.3 350 67.7
Eucgr.I02440 Eucalyptus grandis HOM05D004733 ORTHO05D005925 6.5e-127 458.0 351 63.0
PGR119G1063 Punica granatum HOM05D004733 ORTHO05D005925 6.5e-127 458.0 351 63.0
TWI77G0475 Tripterygium wilfordii HOM05D004733 ORTHO05D005925 8.4e-127 457.6 351 62.7
COL.COLO4_08906 Corchorus olitorius HOM05D004733 ORTHO05D005925 5.5e-126 454.9 376 61.7
RcHm_v2.0_Chr2g0101471 Rosa chinensis HOM05D004733 ORTHO05D005925 2.7e-125 452.6 337 65.3
Actinidia36563 Actinidia chinensis HOM05D004733 ORTHO05D005925 3.5e-125 452.2 355 62.5
Glyma.11G068600 Glycine max HOM05D004733 ORTHO05D005925 1.8e-124 449.9 340 63.5
MD02G1146900 Malus domestica HOM05D004733 ORTHO05D005925 1.8e-124 449.9 353 63.7
Migut.H00986 Erythranthe guttata HOM05D004733 ORTHO05D005925 2.3e-124 449.5 351 63.5
Nn5g29624 Nelumbo nucifera HOM05D004733 ORTHO05D005925 2.3e-124 449.5 347 62.8
Phvul.002G030700 Phaseolus vulgaris HOM05D004733 ORTHO05D005925 3.0e-124 449.1 340 64.1
MSTRG.23523 Avicennia marina HOM05D004733 ORTHO05D005925 1.1e-123 447.2 351 62.7
arahy.Tifrunner.gnm1.ann1.VZ5KK1 Arachis hypogaea HOM05D004733 ORTHO05D005925 1.5e-123 446.8 354 62.4
MD15G1261100 Malus domestica HOM05D004733 ORTHO05D005925 2.5e-123 446.0 337 63.8
Oeu017201.1 Olea europaea HOM05D004733 ORTHO05D005925 2.5e-123 446.0 356 62.1
Aqoxy6G01122 Aquilegia oxysepala HOM05D004733 ORTHO05D005925 3.3e-123 445.7 351 61.5
arahy.Tifrunner.gnm1.ann1.6U5FTL Arachis hypogaea HOM05D004733 ORTHO05D005925 3.3e-123 445.7 362 61.0
TAR625G0290 Trochodendron aralioides HOM05D004733 ORTHO05D005925 3.3e-123 445.7 352 63.6
Glyma.01G176400 Glycine max HOM05D004733 ORTHO05D005925 4.3e-123 445.3 340 63.5
Sc03g0003000 Simmondsia chinensis HOM05D004733 ORTHO05D005925 2.1e-122 443.0 355 62.0
arahy.Tifrunner.gnm1.ann1.VB3WEH Arachis hypogaea HOM05D004733 ORTHO05D005925 1.1e-121 440.7 362 60.5
Rhsim02G0060300 Rhododendron simsii HOM05D004733 ORTHO05D005925 1.8e-121 439.9 387 57.9
ClCG06G002580 Citrullus lanatus HOM05D004733 ORTHO05D005925 4.1e-121 438.7 337 61.7
Lj1g0005862 Lotus japonicus HOM05D004733 ORTHO05D005925 2.0e-120 436.4 356 60.1
Lalb_Chr16g0377811 Lupinus albus HOM05D004733 ORTHO05D005925 3.8e-119 432.2 345 61.7
VMungo1215G0507 Vigna mungo HOM05D004733 ORTHO05D005925 3.2e-118 429.1 310 67.4
TPR.G22288 Trifolium pratense HOM05D004733 ORTHO05D005925 7.9e-117 424.5 347 60.5
Ca_24849_v3 Cicer arietinum L. HOM05D004733 ORTHO05D005925 1.0e-116 424.1 347 61.1
SalBow2G0826 Salvia bowleyana HOM05D004733 ORTHO05D005925 1.8e-116 423.3 356 60.7
Sed0013525 Sechium edule HOM05D004733 ORTHO05D005925 1.8e-116 423.3 351 59.3
Cc03_g11520 Coffea canephora HOM05D004733 ORTHO05D005925 3.9e-116 422.2 360 60.0
AUR62004057 Chenopodium quinoa HOM05D004733 ORTHO05D005925 6.7e-116 421.4 358 59.5
Cpa.g.sc6.117 Carica papaya HOM05D004733 ORTHO05D005925 8.7e-116 421.0 350 61.4
CsaV3_5G036970 Cucumis sativus L. HOM05D004733 ORTHO05D005925 1.9e-115 419.9 351 58.7
MELO3C022270.2 Cucumis melo HOM05D004733 ORTHO05D005925 2.5e-115 419.5 352 59.1
AUR62007571 Chenopodium quinoa HOM05D004733 ORTHO05D005925 4.3e-115 418.7 358 59.2
CsaV3_6G008550 Cucumis sativus L. HOM05D004733 ORTHO05D005925 1.3e-114 417.2 351 58.4
Hund16432 Selenicereus undatus HOM05D004733 ORTHO05D005925 2.8e-114 416.0 354 59.9
Psat2g159520 Pisum sativum HOM05D004733 ORTHO05D005925 3.7e-114 415.6 347 60.5
Medtr5g020190 Medicago truncatula HOM05D004733 ORTHO05D005925 3.4e-112 409.1 343 60.3
PSO541G3573 Papaver somniferum HOM05D004733 ORTHO05D005925 3.4e-112 409.1 357 58.8
HanXRQChr09g0261511 Helianthus annuus HOM05D004733 ORTHO05D005925 5.9e-112 408.3 351 57.5
Ah.03g140900 Amaranthus hybridus HOM05D004733 ORTHO05D005925 3.8e-111 405.6 351 57.8
PSO675G5282 Papaver somniferum HOM05D004733 ORTHO05D005925 1.1e-110 404.1 357 58.5
ECA232G2226 Erigeron canadensis HOM05D004733 ORTHO05D005925 7.2e-110 401.4 341 56.9
Lj4A201T52 Lonicera japonica HOM05D004733 ORTHO05D005925 4.6e-109 398.7 358 56.7
EL10Ac6g15557 Beta vulgaris HOM05D004733 ORTHO05D005925 7.9e-109 397.9 390 53.8
Solyc02g085230.3 Solanum lycopersicum HOM05D004733 ORTHO05D005925 2.0e-107 393.3 351 56.7
Sopen02g029930 Solanum pennellii HOM05D004733 ORTHO05D005925 3.3e-107 392.5 351 56.7
A05p29760 Brassica napus HOM05D004733 ORTHO05D005925 2.2e-106 389.8 338 63.0
Lsat_1_v5_gn_4_152020 Lactuca sativa HOM05D004733 ORTHO05D005925 2.8e-106 389.4 335 58.2
Peaxi162Scf00366g00125 Petunia axillaris HOM05D004733 ORTHO05D005925 7.7e-104 381.3 345 55.7
vmacro15553 Vaccinium macrocarpon HOM05D004733 ORTHO05D005925 5.5e-102 375.2 466 47.2
ATR0665G204 Amborella trichopoda HOM05D004733 ORTHO05D005925 4.7e-101 372.1 351 53.3
CAN.G358.87 Capsicum annuum HOM05D004733 ORTHO05D005925 1.5e-99 367.1 390 50.3
Zm00001eb139270 Zea mays HOM05D004733 ORTHO05D005925 1.1e-97 360.9 346 52.3
CDE02G4373 Ceratophyllum demersum HOM05D004733 ORTHO05D005925 1.6e-96 357.1 351 53.3
Nitab4.5_0001385g0060 Nicotiana tabacum HOM05D004733 ORTHO05D005925 2.2e-95 353.2 360 51.4
Nitab4.5_0000178g0060 Nicotiana tabacum HOM05D004733 ORTHO05D005925 2.7e-93 346.3 432 44.7
CAN.G3433.1 Capsicum annuum HOM05D004733 ORTHO05D005925 1.8e-92 343.6 363 50.1
DCAR_017293 Daucus carota HOM05D004733 ORTHO05D005925 2.0e-88 330.1 349 50.7
Haze_15084 Corylus avellana HOM05D004733 ORTHO05D005925 1.7e-82 310.5 257 60.3
SEGI_33720 Sequoiadendron giganteum HOM05D004733 ORTHO05D005925 5.0e-79 298.9 356 44.1
SEGI_35015 Sequoiadendron giganteum HOM05D004733 ORTHO05D005925 5.0e-79 298.9 356 44.1
Thhalv10021392m.g Eutrema salsugineum HOM05D004733 ORTHO05D005925 7.5e-75 285.0 302 53.6
A05p29770 Brassica napus HOM05D004733 ORTHO05D005925 3.5e-72 276.2 232 64.2
MBI14_g08060_MAGBIO Magnolia biondii HOM05D004733 ORTHO05D005925 5.7e-67 258.8 208 61.5
CBR_g37736 Chara braunii HOM05D004733 ORTHO05D000048 5.9e-64 248.8 367 40.1
unitig_21.g20953 Utricularia gibba HOM05D004733 ORTHO05D005925 5.9e-64 248.8 347 41.2
Pp3c6_25920 Physcomitrium patens HOM05D004733 ORTHO05D005925 1.7e-63 247.3 347 40.1
Hma1.2p1_0400F.1_g144360 Hydrangea macrophylla HOM05D004733 ORTHO05D005925 1.6e-61 240.7 231 54.5
AagrBONN_evm.TU.Sc2ySwM_228.918 Anthoceros agrestis HOM05D004733 ORTHO05D005925 8.9e-60 235.0 366 36.6
SMO347G0575 Selaginella moellendorffii HOM05D004733 ORTHO05D005925 6.6e-55 218.8 287 45.6
GSVIVG01024291001 Vitis vinifera HOM05D004733 ORTHO05D005925 2.9e-50 203.4 156 62.8
A05p29560 Brassica napus HOM05D004733 ORTHO05D005925 6.4e-50 202.2 175 62.3
QL06p046231 Quercus lobata HOM05D004733 ORTHO05D005925 1.0e-47 194.9 146 63.0
CAN.G358.90 Capsicum annuum HOM05D004733 ORTHO05D005925 3.9e-47 193.0 182 53.3
QL02p065474 Quercus lobata HOM05D004733 ORTHO05D005925 3.3e-46 189.9 127 72.4
HPP92_009474 Vanilla planifolia HOM05D004733 ORTHO05D005925 2.2e-42 177.2 162 55.6
Mapoly0060s0020 Marchantia polymorpha HOM05D004733 ORTHO05D005925 1.5e-38 164.5 178 47.8
HPP92_009475 Vanilla planifolia HOM05D004733 ORTHO05D005925 3.3e-38 163.3 170 48.8
C07p61800 Brassica napus HOM05D004733 ORTHO05D005925 1.4e-36 157.9 91 84.6
QL02p065465 Quercus lobata HOM05D004733 ORTHO05D005925 1.9e-33 147.5 168 47.6
MCO15G114 Micromonas commoda HOM05D004733 ORTHO05D005925 8.7e-31 138.7 284 31.3
TPR.G23227 Trifolium pratense HOM05D004733 ORTHO05D006027 1.8e-28 131.0 86 70.9
Psat4g132320 Pisum sativum HOM05D004733 ORTHO05D010533 1.9e-25 120.9 154 44.8
Cre07.g332800 Chlamydomonas reinhardtii HOM05D004733 ORTHO05D005925 1.6e-21 107.8 339 26.5
Medtr1g110810 Medicago truncatula HOM05D004733 ORTHO05D005925 4.0e-20 103.2 145 43.4
arahy.Tifrunner.gnm1.ann1.1JA7FP Arachis hypogaea HOM05D004733 ORTHO05D005925 2.9e-18 97.1 70 62.9
Cfa025732 Carpinus fangiana HOM05D004733 ORTHO05D005925 7.1e-17 92.4 247 30.4
Lj1g0009863 Lotus japonicus HOM05D004733 ORTHO05D001264 8.7e-15 85.5 70 60.0
C07p61790 Brassica napus HOM05D004733 ORTHO05D005925 1.3e-13 81.6 73 56.2
A05p29530 Brassica napus HOM05D004733 ORTHO05D005925 4.9e-10 69.7 70 55.7
Psat2g060920 Pisum sativum HOM05D001085 ORTHO05D000895 3.2e-09 67.0 56 55.4
PRCOL_00003562 Prasinoderma coloniale HOM05D004733 ORTHO05D005925 9.3e-09 65.5 278 24.1
BcaNung05455 Brassica carinata HOM05D004733 ORTHO05D005925 1.2e-08 65.1 35 77.1
Actinidia12125 Actinidia chinensis HOM05D004733 ORTHO05D005925 8.7e-07 58.9 44 63.6
TPR.G36480 Trifolium pratense HOM05D004733 ORTHO05D008348 1.1e-06 58.5 43 62.8


User provided reference genes

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