Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG3G3010 Aethionema arabicum HOM05D007188 ORTHO05D009102 8.6e-114 413.7 212 100.0
AT3G10405 Arabidopsis thaliana HOM05D007188 ORTHO05D009102 2.2e-85 319.3 214 79.9
CARHR084890 Cardamine hirsuta HOM05D007188 ORTHO05D009102 2.9e-85 318.9 212 78.3
AL3G21760 Arabidopsis lyrata HOM05D007188 ORTHO05D009102 6.4e-85 317.8 214 79.0
Carub.0003s0959 Capsella rubella HOM05D007188 ORTHO05D009102 3.5e-83 312.0 213 78.4
Thhalv10021497m.g Eutrema salsugineum HOM05D007188 ORTHO05D009102 1.1e-81 307.0 218 76.1
Sp3g08680 Schrenkiella parvula HOM05D007188 ORTHO05D009102 6.2e-80 301.2 215 74.4
A03p36520 Brassica napus HOM05D007188 ORTHO05D009102 2.2e-77 292.7 211 72.5
BraA03t12819Z Brassica rapa HOM05D007188 ORTHO05D009102 4.6e-75 285.0 218 69.7
BolC3t16687H Brassica oleracea HOM05D007188 ORTHO05D009102 7.9e-75 284.3 211 73.0
C03p44120 Brassica napus HOM05D007188 ORTHO05D009102 3.0e-74 282.3 213 73.2
BcaC01g04184 Brassica carinata HOM05D007188 ORTHO05D009102 9.3e-68 260.8 213 69.0
Gohir.A05G293300 Gossypium hirsutum HOM05D007188 ORTHO05D009102 1.0e-61 240.7 208 60.6
Migut.F01952 Erythranthe guttata HOM05D007188 ORTHO05D009102 1.3e-61 240.4 181 66.9
HanXRQChr08g0218401 Helianthus annuus HOM05D007188 ORTHO05D009102 1.7e-61 240.0 175 68.0
Duzib106G0123 Durio zibethinus HOM05D007188 ORTHO05D009102 2.2e-61 239.6 212 60.4
ECA233G0714 Erigeron canadensis HOM05D007188 ORTHO05D009102 2.2e-61 239.6 198 62.6
Gohir.D05G294000 Gossypium hirsutum HOM05D007188 ORTHO05D009102 2.2e-61 239.6 208 60.1
Gorai.009G310600 Gossypium raimondii HOM05D007188 ORTHO05D009102 1.4e-60 236.9 208 59.1
QL08p054189 Quercus lobata HOM05D007188 ORTHO05D009102 4.2e-60 235.3 152 73.7
Sabra08G0023300 Salix brachista HOM05D007188 ORTHO05D009102 1.2e-59 233.8 209 59.8
Manes.07G133140 Manihot esculenta HOM05D007188 ORTHO05D009102 2.7e-59 232.6 204 61.3
SGA_v2.0_scaffold62G21381 Striga asiatica HOM05D007188 ORTHO05D009102 2.7e-59 232.6 153 73.2
Actinidia38870 Actinidia chinensis HOM05D007188 ORTHO05D009102 4.6e-59 231.9 164 68.9
Lsat_1_v5_gn_8_20860 Lactuca sativa HOM05D007188 ORTHO05D009102 4.6e-59 231.9 208 60.6
Eucgr.G02872 Eucalyptus grandis HOM05D007188 ORTHO05D009102 6.1e-59 231.5 153 71.2
CsaV3_5G036040 Cucumis sativus L. HOM05D007188 ORTHO05D009102 1.0e-58 230.7 191 62.3
CAN.G694.38 Capsicum annuum HOM05D007188 ORTHO05D009102 1.8e-58 229.9 165 67.9
RhsimUnG0185400 Rhododendron simsii HOM05D007188 ORTHO05D009102 1.8e-58 229.9 149 73.8
SalBow4G2327 Salvia bowleyana HOM05D007188 ORTHO05D009102 3.0e-58 229.2 207 56.5
GSVIVG01016213001 Vitis vinifera HOM05D007188 ORTHO05D009102 6.7e-58 228.0 192 61.5
Cc02_g10880 Coffea canephora HOM05D007188 ORTHO05D009102 8.7e-58 227.6 200 58.0
CANSAT56G0643 Cannabis sativa HOM05D007188 ORTHO05D009102 1.1e-57 227.3 174 64.4
Rhsim09G0148000 Rhododendron simsii HOM05D007188 ORTHO05D009102 1.5e-57 226.9 149 73.2
TAR623G0008 Trochodendron aralioides HOM05D007188 ORTHO05D009102 1.9e-57 226.5 151 71.5
TWI38G2147 Tripterygium wilfordii HOM05D007188 ORTHO05D009102 3.3e-57 225.7 192 61.5
Nn6g35269 Nelumbo nucifera HOM05D007188 ORTHO05D009102 4.3e-57 225.3 160 67.5
Potri.008G034900 Populus trichocarpa HOM05D007188 ORTHO05D009102 4.3e-57 225.3 206 57.3
Sed0000210 Sechium edule HOM05D007188 ORTHO05D009102 4.3e-57 225.3 161 67.7
MELO3C012404.2 Cucumis melo HOM05D007188 ORTHO05D009102 7.4e-57 224.6 191 61.8
arahy.Tifrunner.gnm1.ann1.3RW2WH Arachis hypogaea HOM05D007188 ORTHO05D009102 9.7e-57 224.2 148 71.6
arahy.Tifrunner.gnm1.ann1.CRM3NE Arachis hypogaea HOM05D007188 ORTHO05D009102 9.7e-57 224.2 148 71.6
Glyma.20G183500 Glycine max HOM05D007188 ORTHO05D009102 9.7e-57 224.2 148 70.9
Cfa001805 Carpinus fangiana HOM05D007188 ORTHO05D009102 1.6e-56 223.4 209 58.4
CiPaw.02G171800 Carya illinoinensis HOM05D007188 ORTHO05D009102 2.2e-56 223.0 189 60.8
Peaxi162Scf00176g01519 Petunia axillaris HOM05D007188 ORTHO05D009102 2.8e-56 222.6 149 71.8
Aqoxy1G01136 Aquilegia oxysepala HOM05D007188 ORTHO05D009102 3.7e-56 222.2 205 58.5
CSS0007320 Camellia sinensis var. sinensis HOM05D007188 ORTHO05D009102 3.7e-56 222.2 159 67.9
MD01G1102700 Malus domestica HOM05D007188 ORTHO05D009102 3.7e-56 222.2 213 55.9
CSS0035829 Camellia sinensis var. sinensis HOM05D007188 ORTHO05D009102 4.8e-56 221.9 159 67.3
THA.LOC104826897 Tarenaya hassleriana HOM05D007188 ORTHO05D009102 4.8e-56 221.9 230 56.1
Psat6g181120 Pisum sativum HOM05D007188 ORTHO05D009102 1.1e-55 220.7 156 66.7
ClCG05G021230 Citrullus lanatus HOM05D007188 ORTHO05D009102 1.4e-55 220.3 197 60.9
TPR.G10293 Trifolium pratense HOM05D007188 ORTHO05D009102 1.4e-55 220.3 202 54.0
Nitab4.5_0001760g0020 Nicotiana tabacum HOM05D007188 ORTHO05D009102 1.8e-55 219.9 164 64.0
PGSC0003DMG400023370 Solanum tuberosum HOM05D007188 ORTHO05D009102 2.4e-55 219.5 164 64.6
RcHm_v2.0_Chr1g0362491 Rosa chinensis HOM05D007188 ORTHO05D009102 3.1e-55 219.2 206 56.3
Solyc05g055550.3 Solanum lycopersicum HOM05D007188 ORTHO05D009102 6.9e-55 218.0 212 54.7
Atru.chr12.855 Acer truncatum HOM05D007188 ORTHO05D009102 1.2e-54 217.2 142 72.5
Sopen05g034000 Solanum pennellii HOM05D007188 ORTHO05D009102 1.2e-54 217.2 212 54.7
Phvul.007G099300 Phaseolus vulgaris HOM05D007188 ORTHO05D009102 2.0e-54 216.5 165 62.4
VMungo0720G2339 Vigna mungo HOM05D007188 ORTHO05D009102 2.0e-54 216.5 148 67.6
Ah.06g188920 Amaranthus hybridus HOM05D006516 ORTHO05D008083 2.6e-54 216.1 207 54.1
Lalb_Chr21g0313651 Lupinus albus HOM05D007188 ORTHO05D009102 2.6e-54 216.1 148 68.9
Lj5g0026151 Lotus japonicus HOM05D007188 ORTHO05D009102 5.9e-54 214.9 170 62.9
AUR62014280 Chenopodium quinoa HOM05D007188 ORTHO05D009102 1.0e-53 214.2 161 62.7
Ca_10538_v3 Cicer arietinum L. HOM05D007188 ORTHO05D009102 1.0e-53 214.2 154 64.9
FAN01G3175 Fragaria x ananassa HOM05D007188 ORTHO05D009102 1.0e-53 214.2 206 56.8
Medtr1g094160 Medicago truncatula HOM05D007188 ORTHO05D009102 1.0e-53 214.2 193 54.9
FAN06G0953 Fragaria x ananassa HOM05D007188 ORTHO05D009102 2.2e-53 213.0 191 57.6
FAN06G2123 Fragaria x ananassa HOM05D007188 ORTHO05D009102 2.2e-53 213.0 191 57.6
Solyc02g033060.3 Solanum lycopersicum HOM05D007188 ORTHO05D009102 2.2e-53 213.0 186 57.5
FAN03G0393 Fragaria x ananassa HOM05D007188 ORTHO05D009102 3.8e-53 212.2 206 55.8
FAN10G2630 Fragaria x ananassa HOM05D007188 ORTHO05D009102 5.0e-53 211.8 191 57.1
Sc06g0002050 Simmondsia chinensis HOM05D007188 ORTHO05D009102 5.0e-53 211.8 142 69.0
Zm00001eb022660 Zea mays HOM05D007188 ORTHO05D009102 4.2e-52 208.8 147 66.7
unitig_88.g27814 Utricularia gibba HOM05D007188 ORTHO05D009102 2.7e-51 206.1 152 63.8
PSO063G4012 Papaver somniferum HOM05D007188 ORTHO05D009102 4.6e-51 205.3 156 63.5
Os10g0545100 Oryza sativa ssp. japonica HOM05D007188 ORTHO05D009102 1.0e-50 204.1 137 67.2
CDE09G0470 Ceratophyllum demersum HOM05D007188 ORTHO05D009102 1.8e-50 203.4 147 63.3
Glyma.10G207400 Glycine max HOM05D007188 ORTHO05D009102 3.0e-50 202.6 162 61.1
Sopen02g011440 Solanum pennellii HOM05D007188 ORTHO05D009102 6.7e-50 201.4 132 70.5
Thecc.10G085100 Theobroma cacao HOM05D007188 ORTHO05D009102 3.4e-46 189.1 173 56.1
EL10Ac4g08743 Beta vulgaris HOM05D007188 ORTHO05D009102 2.9e-45 186.0 148 62.2
COL.COLO4_36178 Corchorus olitorius HOM05D007188 ORTHO05D009102 4.7e-43 178.7 234 44.9
Mapoly0050s0048 Marchantia polymorpha HOM05D007188 ORTHO05D009102 1.4e-42 177.2 210 46.2
Mapoly0278s0008 Marchantia polymorpha HOM05D007188 ORTHO05D009102 1.4e-42 177.2 210 46.2
Dinv31237 Davidia involucrata HOM05D007188 ORTHO05D009102 3.0e-42 176.0 125 68.0
Haze_16743 Corylus avellana HOM05D007188 ORTHO05D009102 2.8e-40 169.5 209 49.3
vmacro04839 Vaccinium macrocarpon HOM05D007188 ORTHO05D009102 8.2e-40 167.9 142 60.6
Prupe.2G208300 Prunus persica HOM05D007188 ORTHO05D009102 1.4e-39 167.2 152 55.9
Pp3c2_18450 Physcomitrium patens HOM05D007188 ORTHO05D009102 1.2e-38 164.1 173 48.0
Hund14950 Selenicereus undatus HOM05D007188 ORTHO05D009102 4.5e-38 162.2 171 52.6
Nitab4.5_0000096g0330 Nicotiana tabacum HOM05D007188 ORTHO05D009102 1.7e-37 160.2 134 57.5
Ciclev10033195m.g Citrus clementina HOM05D007188 ORTHO05D009102 3.2e-36 156.0 90 84.4
AagrBONN_evm.TU.Sc2ySwM_228.639 Anthoceros agrestis HOM05D007188 ORTHO05D009102 2.7e-30 136.3 144 48.6
SMO358G0267 Selaginella moellendorffii HOM05D007188 ORTHO05D009102 2.1e-27 126.7 173 37.0
PSO339G6470 Papaver somniferum HOM05D007188 ORTHO05D009102 7.5e-25 118.2 113 54.9
FvH4_7g18710 Fragaria vesca HOM05D007188 ORTHO05D009102 4.1e-23 112.5 133 45.9
CBR_g28804 Chara braunii HOM05D007188 ORTHO05D009102 3.5e-22 109.4 184 33.7
SEGI_08985 Sequoiadendron giganteum HOM05D007188 ORTHO05D009102 1.3e-21 107.5 72 70.8
MCO11G330 Micromonas commoda HOM05D007188 ORTHO05D009102 2.2e-16 90.1 138 33.3
Cre10.g464650 Chlamydomonas reinhardtii HOM05D007188 ORTHO05D009102 7.3e-12 75.1 122 31.1
Rhsim09G0147800 Rhododendron simsii HOM05D007188 ORTHO05D009102 2.8e-11 73.2 161 34.2
FAN10G3168 Fragaria x ananassa HOM05D007188 ORTHO05D009102 2.3e-10 70.1 101 40.6
PRCOL_00002171 Prasinoderma coloniale HOM05D007188 ORTHO05D009102 2.3e-10 70.1 144 29.9
Oeu034116.1 Olea europaea HOM05D007188 ORTHO05D009102 4.0e-10 69.3 51 68.6
RhsimUnG0185100 Rhododendron simsii HOM05D007188 ORTHO05D009102 7.5e-09 65.1 161 31.7
HPP92_025582 Vanilla planifolia HOM05D006951 ORTHO05D008594 7.5e-09 65.1 43 60.5
HPP92_025583 Vanilla planifolia HOM05D006951 ORTHO05D008594 9.8e-09 64.7 44 72.7
vmacro04837 Vaccinium macrocarpon HOM05D000026 ORTHO05D000094 4.1e-07 59.3 39 74.4
AUR62034156 Chenopodium quinoa HOM05D007188 ORTHO05D009102 3.5e-06 56.2 108 35.2


User provided reference genes

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