Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG3G2990 Aethionema arabicum HOM05D006041 ORTHO05D007473 2.5e-122 442.2 231 100.0
Aa31LG2G8250 Aethionema arabicum HOM05D006041 ORTHO05D007473 3.8e-99 365.2 228 86.8
Carub.0005s0060 Capsella rubella HOM05D006041 ORTHO05D007473 2.0e-84 316.2 218 80.3
Sp2g13100 Schrenkiella parvula HOM05D006041 ORTHO05D007473 5.5e-82 308.1 225 76.4
AT2G01650 Arabidopsis thaliana HOM05D006041 ORTHO05D007473 8.9e-80 300.8 228 75.4
AL5G10750 Arabidopsis lyrata HOM05D006041 ORTHO05D007473 1.2e-79 300.4 228 74.6
Thhalv10004151m.g Eutrema salsugineum HOM05D006041 ORTHO05D007473 3.7e-78 295.4 214 76.6
CARHR144220 Cardamine hirsuta HOM05D006041 ORTHO05D007473 4.5e-76 288.5 229 71.6
BcaC06g31287 Brassica carinata HOM05D006041 ORTHO05D007473 7.8e-76 287.7 217 72.8
C07p32270 Brassica napus HOM05D006041 ORTHO05D007473 1.9e-74 283.1 208 76.0
BcaC06g34139 Brassica carinata HOM05D006041 ORTHO05D007473 4.3e-74 282.0 208 75.5
BolC7t43765H Brassica oleracea HOM05D006041 ORTHO05D007473 4.3e-74 282.0 208 75.5
THA.LOC104805081 Tarenaya hassleriana HOM05D006041 ORTHO05D007473 1.6e-73 280.0 228 67.1
A06p44210 Brassica napus HOM05D006041 ORTHO05D007473 5.2e-72 275.0 208 74.5
BraA06t27296Z Brassica rapa HOM05D006041 ORTHO05D007473 5.2e-72 275.0 208 74.5
Aa31sc215G20 Aethionema arabicum HOM05D006041 ORTHO05D007473 3.9e-67 258.8 155 91.6
COL.COLO4_16567 Corchorus olitorius HOM05D006041 ORTHO05D007473 2.8e-65 252.7 228 62.3
Manes.15G133200 Manihot esculenta HOM05D006041 ORTHO05D007473 2.8e-65 252.7 228 61.8
Duzib251G0740 Durio zibethinus HOM05D006041 ORTHO05D007473 1.1e-64 250.8 228 61.4
Duzib268G1057 Durio zibethinus HOM05D006041 ORTHO05D007473 1.8e-64 250.0 228 61.0
Thecc.02G290600 Theobroma cacao HOM05D006041 ORTHO05D007473 1.8e-64 250.0 228 61.4
Eucgr.G02114 Eucalyptus grandis HOM05D006041 ORTHO05D007473 4.0e-64 248.8 228 57.0
Ciclev10015068m.g Citrus clementina HOM05D006041 ORTHO05D007473 4.4e-63 245.4 227 60.4
PGR142G4228 Punica granatum HOM05D006041 ORTHO05D007473 4.4e-63 245.4 229 60.3
Cpa.g.c27573.2 Carica papaya HOM05D006041 ORTHO05D007473 9.8e-63 244.2 228 58.8
Haze_10912 Corylus avellana HOM05D006041 ORTHO05D007473 2.9e-62 242.7 228 57.5
TWI74G1002 Tripterygium wilfordii HOM05D006041 ORTHO05D007473 2.9e-62 242.7 228 59.2
Sabra08G0102300 Salix brachista HOM05D006041 ORTHO05D007473 4.9e-62 241.9 229 59.0
Dinv26256 Davidia involucrata HOM05D006041 ORTHO05D007473 1.4e-61 240.4 228 58.8
Gorai.005G158800 Gossypium raimondii HOM05D006041 ORTHO05D007473 2.4e-61 239.6 230 59.1
CSS0021041 Camellia sinensis var. sinensis HOM05D006041 ORTHO05D007473 9.2e-61 237.7 228 56.6
CSS0021655 Camellia sinensis var. sinensis HOM05D006041 ORTHO05D007473 9.2e-61 237.7 228 56.6
Gohir.A01G147900 Gossypium hirsutum HOM05D006041 ORTHO05D007473 9.2e-61 237.7 227 59.9
Cfa015002 Carpinus fangiana HOM05D006041 ORTHO05D007473 1.6e-60 236.9 225 56.9
Cc11_g08020 Coffea canephora HOM05D006041 ORTHO05D007473 4.6e-60 235.3 227 59.9
VMungo0251G2799 Vigna mungo HOM05D006041 ORTHO05D007473 6.0e-60 235.0 228 55.7
Nitab4.5_0000238g0060 Nicotiana tabacum HOM05D006041 ORTHO05D007473 7.8e-60 234.6 227 57.3
Lalb_Chr05g0222281 Lupinus albus HOM05D006041 ORTHO05D007473 1.0e-59 234.2 228 57.0
Nitab4.5_0009602g0010 Nicotiana tabacum HOM05D006041 ORTHO05D007473 1.0e-59 234.2 228 56.1
Gorai.002G173400 Gossypium raimondii HOM05D006041 ORTHO05D007473 3.9e-59 232.3 228 58.3
Lj4g0006027 Lotus japonicus HOM05D006041 ORTHO05D007473 5.1e-59 231.9 230 56.1
Prupe.1G331600 Prunus persica HOM05D006041 ORTHO05D007473 5.1e-59 231.9 226 56.6
RcHm_v2.0_Chr4g0443331 Rosa chinensis HOM05D006041 ORTHO05D007473 6.6e-59 231.5 226 57.1
PGSC0003DMG400032118 Solanum tuberosum HOM05D006041 ORTHO05D007473 8.6e-59 231.1 228 56.1
MSTRG.2140 Avicennia marina HOM05D006041 ORTHO05D007473 1.1e-58 230.7 208 59.1
Lj6A740T67 Lonicera japonica HOM05D006041 ORTHO05D007473 1.1e-58 230.7 210 61.4
TPR.G32714 Trifolium pratense HOM05D006041 ORTHO05D007473 1.1e-58 230.7 230 55.7
Gohir.D01G141100 Gossypium hirsutum HOM05D006041 ORTHO05D007473 1.5e-58 230.3 228 57.9
CAN.G1130.10 Capsicum annuum HOM05D006041 ORTHO05D007473 1.9e-58 229.9 228 55.3
Peaxi162Scf00655g00023 Petunia axillaris HOM05D006041 ORTHO05D007473 1.9e-58 229.9 228 54.8
Phvul.002G319700 Phaseolus vulgaris HOM05D006041 ORTHO05D007473 1.9e-58 229.9 231 57.1
MBI19_g21093_MAGBIO Magnolia biondii HOM05D006041 ORTHO05D007473 2.5e-58 229.6 228 55.3
MD16G1020600 Malus domestica HOM05D006041 ORTHO05D007473 3.3e-58 229.2 228 56.6
Solyc01g005430.3 Solanum lycopersicum HOM05D006041 ORTHO05D007473 3.3e-58 229.2 228 55.3
Glyma.08G042900 Glycine max HOM05D006041 ORTHO05D007473 4.3e-58 228.8 228 54.4
Haze_10913 Corylus avellana HOM05D006041 ORTHO05D007473 5.6e-58 228.4 254 51.6
Sopen01g001440 Solanum pennellii HOM05D006041 ORTHO05D007473 5.6e-58 228.4 228 55.3
Atru.chr11.510 Acer truncatum HOM05D006041 ORTHO05D007473 9.5e-58 227.6 228 55.7
Glyma.05G235400 Glycine max HOM05D006041 ORTHO05D007473 9.5e-58 227.6 231 55.0
Psat7g009240 Pisum sativum HOM05D006041 ORTHO05D007473 1.2e-57 227.3 230 56.1
SalBow2G0340 Salvia bowleyana HOM05D006041 ORTHO05D007473 1.2e-57 227.3 208 57.2
DCAR_007323 Daucus carota HOM05D006041 ORTHO05D007473 1.6e-57 226.9 233 53.6
Medtr8g104930 Medicago truncatula HOM05D006041 ORTHO05D007473 2.8e-57 226.1 230 56.5
MD13G1029800 Malus domestica HOM05D006041 ORTHO05D007473 3.6e-57 225.7 228 54.4
Migut.E00465 Erythranthe guttata HOM05D006041 ORTHO05D007473 4.7e-57 225.3 228 54.8
CsaV3_5G028000 Cucumis sativus L. HOM05D006041 ORTHO05D007473 8.1e-57 224.6 228 54.4
TAR629G0174 Trochodendron aralioides HOM05D006041 ORTHO05D007473 1.1e-56 224.2 228 54.8
Manes.17G082400 Manihot esculenta HOM05D006041 ORTHO05D007473 1.4e-56 223.8 228 58.3
Rhsim09G0037900 Rhododendron simsii HOM05D006041 ORTHO05D007473 1.8e-56 223.4 232 54.7
FvH4_4g33820 Fragaria vesca HOM05D006041 ORTHO05D007473 2.3e-56 223.0 227 56.4
MELO3C005281.2 Cucumis melo HOM05D006041 ORTHO05D007473 3.1e-56 222.6 228 54.4
Nn4g24305 Nelumbo nucifera HOM05D006041 ORTHO05D007473 6.8e-56 221.5 235 53.6
Oeu016281.1 Olea europaea HOM05D006041 ORTHO05D007473 6.8e-56 221.5 228 53.9
FAN12G3784 Fragaria x ananassa HOM05D006041 ORTHO05D007473 3.4e-55 219.2 235 55.3
Ca_17289_v3 Cicer arietinum L. HOM05D006041 ORTHO05D007473 1.3e-54 217.2 232 54.7
vmacro00556 Vaccinium macrocarpon HOM05D006041 ORTHO05D007473 1.3e-54 217.2 229 54.6
AUR62003915 Chenopodium quinoa HOM05D006041 ORTHO05D007473 2.2e-54 216.5 237 54.0
arahy.Tifrunner.gnm1.ann1.IVEQ23 Arachis hypogaea HOM05D006041 ORTHO05D007473 2.9e-54 216.1 228 52.2
Sed0015632 Sechium edule HOM05D006041 ORTHO05D007473 1.1e-53 214.2 224 54.0
arahy.Tifrunner.gnm1.ann1.BAL5EB Arachis hypogaea HOM05D006041 ORTHO05D007473 2.4e-53 213.0 228 51.3
GSVIVG01011678001 Vitis vinifera HOM05D006041 ORTHO05D007473 3.2e-53 212.6 190 60.5
FAN17G0347 Fragaria x ananassa HOM05D006041 ORTHO05D007473 5.4e-53 211.8 233 53.6
CANSAT01G0691 Cannabis sativa HOM05D006041 ORTHO05D007473 2.1e-52 209.9 229 55.5
ATR0753G012 Amborella trichopoda HOM05D006041 ORTHO05D007473 4.6e-52 208.8 230 53.9
FAN22G1094 Fragaria x ananassa HOM05D006041 ORTHO05D007473 1.0e-51 207.6 246 51.6
EL10Ac6g15713 Beta vulgaris HOM05D006041 ORTHO05D007473 1.3e-51 207.2 234 53.4
Sc03g0001760 Simmondsia chinensis HOM05D006041 ORTHO05D007473 1.7e-51 206.8 232 53.0
Ah.03g145700 Amaranthus hybridus HOM05D006041 ORTHO05D007473 3.0e-51 206.1 227 54.6
HanXRQChr08g0212441 Helianthus annuus HOM05D006041 ORTHO05D007473 3.0e-51 206.1 228 53.1
SGA_v2.0_scaffold139G35400 Striga asiatica HOM05D006041 ORTHO05D007473 3.0e-51 206.1 232 49.1
unitig_27.g25310 Utricularia gibba HOM05D006041 ORTHO05D007473 3.0e-51 206.1 229 53.3
ECA233G3443 Erigeron canadensis HOM05D006041 ORTHO05D007473 3.9e-51 205.7 208 54.8
TAR371G0590 Trochodendron aralioides HOM05D006041 ORTHO05D007473 1.1e-50 204.1 228 52.2
Lsat_1_v5_gn_8_45641 Lactuca sativa HOM05D006041 ORTHO05D007473 1.5e-50 203.8 225 53.3
Aqoxy3G00037 Aquilegia oxysepala HOM05D006041 ORTHO05D007473 6.8e-48 194.9 247 49.0
CDE07G0862 Ceratophyllum demersum HOM05D006041 ORTHO05D007473 2.0e-47 193.4 208 54.3
Potri.008G133700 Populus trichocarpa HOM05D006041 ORTHO05D007473 1.3e-46 190.7 160 64.4
PSO478G4621 Papaver somniferum HOM05D006041 ORTHO05D007473 1.9e-45 186.8 210 52.4
PSO017G0247 Papaver somniferum HOM05D006041 ORTHO05D007473 5.4e-45 185.3 210 51.9
ClCG01G006460 Citrullus lanatus HOM05D006041 ORTHO05D007473 1.2e-44 184.1 228 48.2
Dinv18641 Davidia involucrata HOM05D006041 ORTHO05D007473 7.3e-42 174.9 159 60.4
Gohir.A03G117900 Gossypium hirsutum HOM05D006041 ORTHO05D007473 7.3e-42 174.9 159 60.4
CiPaw.05G190300 Carya illinoinensis HOM05D006041 ORTHO05D007473 9.6e-42 174.5 159 57.2
Gohir.D02G141500 Gossypium hirsutum HOM05D006041 ORTHO05D007473 3.6e-41 172.6 159 59.1
QL03p034952 Quercus lobata HOM05D006041 ORTHO05D007473 1.8e-40 170.2 181 51.9
Sed0013468 Sechium edule HOM05D006041 ORTHO05D007473 4.0e-40 169.1 159 57.9
SGA_v2.0_scaffold151G36757 Striga asiatica HOM05D006041 ORTHO05D007473 4.0e-40 169.1 225 46.7
Zm00001eb099250 Zea mays HOM05D006041 ORTHO05D007473 4.0e-40 169.1 217 47.9
Os09g0401600 Oryza sativa ssp. japonica HOM05D006041 ORTHO05D007473 1.3e-38 164.1 221 45.7
HPP92_009644 Vanilla planifolia HOM05D006041 ORTHO05D007473 1.9e-37 160.2 214 45.3
Zm00001eb312180 Zea mays HOM05D006041 ORTHO05D007473 3.5e-36 156.0 216 45.8
AUR62038228 Chenopodium quinoa HOM05D006041 ORTHO05D007473 6.6e-35 151.8 237 43.5
CBR_g3474 Chara braunii HOM05D006041 ORTHO05D007473 5.8e-31 138.7 219 39.3
SGA_v2.0_scaffold151G36726 Striga asiatica HOM05D006041 ORTHO05D007473 1.5e-26 124.0 158 48.1
SEGI_21307 Sequoiadendron giganteum HOM05D006041 ORTHO05D007473 2.8e-25 119.8 208 38.5
Mapoly0081s0058 Marchantia polymorpha HOM05D006041 ORTHO05D007473 6.4e-22 108.6 159 41.5
CDE06G1197 Ceratophyllum demersum HOM05D006041 ORTHO05D007473 1.4e-16 90.9 131 45.8
SMO276G0024 Selaginella moellendorffii HOM05D006041 ORTHO05D007473 1.4e-16 90.9 98 49.0
Actinidia34031 Actinidia chinensis HOM05D006041 ORTHO05D007473 9.3e-13 78.2 57 68.4
Migut.H00060 Erythranthe guttata HOM05D004631 ORTHO05D005223 5.0e-06 55.8 156 26.9
MD17G1018100 Malus domestica HOM05D004631 ORTHO05D005223 6.5e-06 55.5 185 28.1
CAN.G3.6 Capsicum annuum HOM05D006041 ORTHO05D007473 8.5e-06 55.1 159 28.3


User provided reference genes

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