Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG3G2550 Aethionema arabicum HOM05D006043 ORTHO05D007309 2.4e-78 295.4 149 100.0
AT3G10020 Arabidopsis thaliana HOM05D006043 ORTHO05D007309 3.6e-66 255.0 150 84.0
Carub.0003s0912 Capsella rubella HOM05D006043 ORTHO05D007309 5.2e-65 251.1 151 82.8
AL3G21330 Arabidopsis lyrata HOM05D006043 ORTHO05D007309 8.9e-65 250.4 150 83.3
CARHR084520 Cardamine hirsuta HOM05D006043 ORTHO05D007309 7.5e-64 247.3 148 82.4
Sp3g08330 Schrenkiella parvula HOM05D006043 ORTHO05D007309 1.1e-62 243.4 150 80.7
BcaC05g29726 Brassica carinata HOM05D006043 ORTHO05D007309 3.1e-62 241.9 154 79.2
Thhalv10021699m.g Eutrema salsugineum HOM05D006043 ORTHO05D007309 7.0e-62 240.7 152 79.6
BraA05t22694Z Brassica rapa HOM05D006043 ORTHO05D007309 1.6e-61 239.6 150 80.0
A05p39030 Brassica napus HOM05D006043 ORTHO05D007309 2.7e-61 238.8 151 79.5
C05p58050 Brassica napus HOM05D002004 ORTHO05D002089 4.5e-61 238.0 150 79.3
BolC5t34462H Brassica oleracea HOM05D006043 ORTHO05D007309 4.5e-61 238.0 150 79.3
BcaB03g11578 Brassica carinata HOM05D006043 ORTHO05D007309 2.9e-60 235.3 147 78.9
BcaC01g04256 Brassica carinata HOM05D006043 ORTHO05D007309 2.1e-58 229.2 147 76.9
BraA03t12747Z Brassica rapa HOM05D006043 ORTHO05D007309 2.8e-58 228.8 148 77.0
A03p35730 Brassica napus HOM05D006043 ORTHO05D007309 1.0e-57 226.9 143 78.3
C03p43400 Brassica napus HOM05D006043 ORTHO05D007309 1.8e-57 226.1 147 75.5
BolC3t16611H Brassica oleracea HOM05D006043 ORTHO05D007309 1.4e-54 216.5 148 72.3
BolC8t51238H Brassica oleracea HOM05D006043 ORTHO05D007309 7.5e-48 194.1 134 70.9
THA.LOC104816380 Tarenaya hassleriana HOM05D006043 ORTHO05D007309 1.2e-40 170.2 139 61.2
Cpa.g.sc5.89 Carica papaya HOM05D006043 ORTHO05D007309 3.2e-38 162.2 142 60.6
Manes.08G019800 Manihot esculenta HOM05D006043 ORTHO05D007309 1.6e-37 159.8 145 60.7
Rhsim06G0171100 Rhododendron simsii HOM05D006043 ORTHO05D007309 1.1e-35 153.7 147 55.8
Glyma.03G190100 Glycine max HOM05D006043 ORTHO05D007309 5.6e-35 151.4 142 57.7
VMungo1383G3657 Vigna mungo HOM05D006043 ORTHO05D007309 3.6e-34 148.7 142 56.3
Lalb_Chr20g0112261 Lupinus albus HOM05D006043 ORTHO05D007309 4.7e-34 148.3 141 58.9
C08p36560 Brassica napus HOM05D006043 ORTHO05D007309 1.1e-33 147.1 100 72.0
Glyma.19G190400 Glycine max HOM05D006043 ORTHO05D007309 1.1e-33 147.1 142 55.6
Atru.chr8.1654 Acer truncatum HOM05D006043 ORTHO05D007309 1.8e-33 146.4 148 56.8
FAN02G0054 Fragaria x ananassa HOM05D006043 ORTHO05D007309 6.8e-33 144.4 146 54.1
Lj1g0027910 Lotus japonicus HOM05D006043 ORTHO05D007309 6.8e-33 144.4 142 55.6
Ciclev10013017m.g Citrus clementina HOM05D006043 ORTHO05D007309 8.9e-33 144.1 146 54.1
Duzib106G1072 Durio zibethinus HOM05D006043 ORTHO05D007309 8.9e-33 144.1 147 56.5
Haze_19524 Corylus avellana HOM05D006043 ORTHO05D007309 1.5e-32 143.3 147 56.5
vmacro12136 Vaccinium macrocarpon HOM05D006043 ORTHO05D007309 2.0e-32 142.9 143 54.5
Cfa016525 Carpinus fangiana HOM05D006043 ORTHO05D007309 2.6e-32 142.5 147 55.1
FvH4_6g17700 Fragaria vesca HOM05D006043 ORTHO05D007309 2.6e-32 142.5 146 55.5
Gohir.A04G066428 Gossypium hirsutum HOM05D006043 ORTHO05D007309 2.6e-32 142.5 148 56.8
Phvul.001G185700 Phaseolus vulgaris HOM05D006043 ORTHO05D007309 3.4e-32 142.1 142 54.2
BcaC03g16179 Brassica carinata HOM05D006043 ORTHO05D007309 7.6e-32 141.0 100 70.0
Gorai.006G158600 Gossypium raimondii HOM05D006043 ORTHO05D007309 7.6e-32 141.0 148 54.7
MD14G1014200 Malus domestica HOM05D006043 ORTHO05D007309 7.6e-32 141.0 143 55.2
Gohir.D04G105000 Gossypium hirsutum HOM05D006043 ORTHO05D007309 9.9e-32 140.6 150 56.7
Gorai.009G408700 Gossypium raimondii HOM05D006043 ORTHO05D007309 9.9e-32 140.6 150 56.7
C02p39530 Brassica napus HOM05D006043 ORTHO05D007309 2.2e-31 139.4 100 69.0
BolC2t09966H Brassica oleracea HOM05D006043 ORTHO05D007309 2.2e-31 139.4 100 69.0
Prupe.7G119300 Prunus persica HOM05D006043 ORTHO05D007309 2.2e-31 139.4 143 55.2
Sc07g0005350 Simmondsia chinensis HOM05D006043 ORTHO05D007309 2.2e-31 139.4 144 52.8
CSS0040940 Camellia sinensis var. sinensis HOM05D006043 ORTHO05D007309 2.9e-31 139.0 151 50.3
MELO3C009427.2 Cucumis melo HOM05D006043 ORTHO05D007309 2.9e-31 139.0 141 52.5
COL.COLO4_29832 Corchorus olitorius HOM05D006043 ORTHO05D007309 3.8e-31 138.7 147 55.1
Dinv21268 Davidia involucrata HOM05D006043 ORTHO05D007309 3.8e-31 138.7 141 53.2
TPR.G7024 Trifolium pratense HOM05D006043 ORTHO05D007309 4.9e-31 138.3 141 55.3
Gohir.D09G138000 Gossypium hirsutum HOM05D006043 ORTHO05D007309 6.4e-31 137.9 148 54.1
Medtr7g103520 Medicago truncatula HOM05D006043 ORTHO05D007309 6.4e-31 137.9 143 53.1
CANSAT80G1206 Cannabis sativa HOM05D006043 ORTHO05D007309 8.4e-31 137.5 141 54.6
Ca_08959_v3 Cicer arietinum L. HOM05D006043 ORTHO05D007309 1.1e-30 137.1 143 53.1
Eucgr.K02384 Eucalyptus grandis HOM05D006043 ORTHO05D007309 1.4e-30 136.7 146 52.1
Eucgr.K02410 Eucalyptus grandis HOM05D006043 ORTHO05D007309 2.4e-30 136.0 146 51.4
Peaxi162Scf00412g00073 Petunia axillaris HOM05D006043 ORTHO05D007309 2.4e-30 136.0 141 51.1
CsaV3_3G036730 Cucumis sativus L. HOM05D006043 ORTHO05D007309 5.4e-30 134.8 141 51.8
Eucgr.K02399 Eucalyptus grandis HOM05D006043 ORTHO05D007309 5.4e-30 134.8 146 50.7
QL07p040748 Quercus lobata HOM05D006043 ORTHO05D007309 5.4e-30 134.8 146 52.7
MD12G1016000 Malus domestica HOM05D006043 ORTHO05D007309 7.1e-30 134.4 143 52.4
Potri.013G014300 Populus trichocarpa HOM05D006043 ORTHO05D007309 1.2e-29 133.7 152 53.9
RcHm_v2.0_Chr3g0471911 Rosa chinensis HOM05D006043 ORTHO05D007309 1.6e-29 133.3 148 52.7
EL10Ac7g17005 Beta vulgaris HOM05D006043 ORTHO05D007309 2.1e-29 132.9 146 48.6
ClCG10G019450 Citrullus lanatus HOM05D006043 ORTHO05D007309 2.1e-29 132.9 141 51.8
Eucgr.A01560 Eucalyptus grandis HOM05D006043 ORTHO05D007309 2.7e-29 132.5 127 52.8
Eucgr.K02389 Eucalyptus grandis HOM05D006043 ORTHO05D007309 6.0e-29 131.3 146 49.3
Oeu030483.1 Olea europaea HOM05D006043 ORTHO05D007309 1.7e-28 129.8 144 50.0
CiPaw.10G004600 Carya illinoinensis HOM05D006043 ORTHO05D007309 3.0e-28 129.0 148 49.3
Cc06_g05110 Coffea canephora HOM05D006043 ORTHO05D007309 3.0e-28 129.0 145 50.3
Cc00_g32800 Coffea canephora HOM05D006043 ORTHO05D007309 3.9e-28 128.6 145 51.0
SGA_v2.0_scaffold40G15419 Striga asiatica HOM05D006043 ORTHO05D007309 3.9e-28 128.6 144 50.7
Nn2g13971 Nelumbo nucifera HOM05D006043 ORTHO05D007309 5.1e-28 128.3 116 57.8
PGSC0003DMG400002724 Solanum tuberosum HOM05D006043 ORTHO05D007309 1.1e-27 127.1 146 47.3
Gohir.A09G136312 Gossypium hirsutum HOM05D006043 ORTHO05D007309 1.5e-27 126.7 158 48.7
HanXRQChr09g0259401 Helianthus annuus HOM05D006043 ORTHO05D007309 1.5e-27 126.7 143 46.2
Ah.08g211020 Amaranthus hybridus HOM05D006043 ORTHO05D007309 1.9e-27 126.3 144 45.8
TWI53G1797 Tripterygium wilfordii HOM05D006043 ORTHO05D007309 4.3e-27 125.2 104 61.5
Duzib093G0521 Durio zibethinus HOM05D006043 ORTHO05D007309 5.6e-27 124.8 147 55.1
PSO384G2483 Papaver somniferum HOM05D006043 ORTHO05D007309 9.6e-27 124.0 159 47.2
Sopen09g003740 Solanum pennellii HOM05D006043 ORTHO05D007309 9.6e-27 124.0 151 47.7
Psat3g036320 Pisum sativum HOM05D006043 ORTHO05D007309 1.6e-26 123.2 107 57.0
Aqoxy1G00961 Aquilegia oxysepala HOM05D006043 ORTHO05D007309 4.7e-26 121.7 150 48.7
Solyc09g008980.2 Solanum lycopersicum HOM05D006043 ORTHO05D007309 8.1e-26 120.9 151 47.0
PGSC0003DMG400002723 Solanum tuberosum HOM05D006043 ORTHO05D007309 8.1e-26 120.9 142 50.0
CAN.G824.34 Capsicum annuum HOM05D006043 ORTHO05D007309 1.4e-25 120.2 116 52.6
Nitab4.5_0010125g0040 Nicotiana tabacum HOM05D006043 ORTHO05D007309 2.4e-25 119.4 128 52.3
Cc00_g05260 Coffea canephora HOM05D006043 ORTHO05D007309 3.1e-25 119.0 145 49.7
MBI01_g32535_MAGBIO Magnolia biondii HOM05D006043 ORTHO05D007309 3.1e-25 119.0 131 51.9
Zm00001eb406490 Zea mays HOM05D006043 ORTHO05D007309 4.0e-25 118.6 139 46.8
Nitab4.5_0010125g0030 Nicotiana tabacum HOM05D006043 ORTHO05D007309 9.0e-25 117.5 146 47.3
SalBow3G1044 Salvia bowleyana HOM05D006043 ORTHO05D007309 9.0e-25 117.5 142 48.6
Lsat_1_v5_gn_2_22321 Lactuca sativa HOM05D006043 ORTHO05D007309 1.5e-24 116.7 135 47.4
Peaxi162Scf00412g00063 Petunia axillaris HOM05D006043 ORTHO05D007309 1.5e-24 116.7 148 48.0
PGR004G1627 Punica granatum HOM05D006043 ORTHO05D007309 1.5e-24 116.7 131 48.1
DCAR_009167 Daucus carota HOM05D006043 ORTHO05D007309 3.4e-24 115.5 139 48.9
THA.LOC104823222 Tarenaya hassleriana HOM05D006043 ORTHO05D007309 3.4e-24 115.5 75 70.7
Sopen09g003730 Solanum pennellii HOM05D006043 ORTHO05D007309 5.8e-24 114.8 142 49.3
Os11g0149200 Oryza sativa ssp. japonica HOM05D006043 ORTHO05D007309 7.6e-24 114.4 130 52.3
ECA126G0006 Erigeron canadensis HOM05D006043 ORTHO05D007309 1.3e-23 113.6 101 53.5
Solyc09g008970.1 Solanum lycopersicum HOM05D006043 ORTHO05D007309 2.2e-23 112.8 142 47.9
Oeu040545.1 Olea europaea HOM05D006043 ORTHO05D007309 1.9e-22 109.8 149 45.0
Sed0027852 Sechium edule HOM05D006043 ORTHO05D007309 4.2e-22 108.6 141 48.2
Os12g0147200 Oryza sativa ssp. japonica HOM05D006043 ORTHO05D007309 9.3e-22 107.5 134 47.8
Nn6g35076 Nelumbo nucifera HOM05D006043 ORTHO05D007309 2.1e-21 106.3 131 49.6
Nitab4.5_0001922g0090 Nicotiana tabacum HOM05D006043 ORTHO05D007309 1.0e-20 104.0 114 50.9
Thecc.05G079900 Theobroma cacao HOM05D006043 ORTHO05D007309 1.0e-20 104.0 149 48.3
Aqoxy2G01470 Aquilegia oxysepala HOM05D006043 ORTHO05D007309 9.6e-19 97.4 122 47.5
HPP92_021571 Vanilla planifolia HOM05D006043 ORTHO05D007309 9.6e-19 97.4 126 43.7
Lj2P127T74 Lonicera japonica HOM05D006043 ORTHO05D007309 1.3e-18 97.1 133 46.6
Lj4P368T6 Lonicera japonica HOM05D006043 ORTHO05D007309 9.0e-17 90.9 78 57.7
TWI13G0012 Tripterygium wilfordii HOM05D006043 ORTHO05D007309 1.1e-14 84.0 152 42.8
TWI74G0769 Tripterygium wilfordii HOM05D006043 ORTHO05D007309 1.1e-14 84.0 152 42.8
AUR62033593 Chenopodium quinoa HOM05D006043 ORTHO05D007309 7.1e-14 81.3 137 36.5
Prupe.7G091800 Prunus persica HOM05D006043 ORTHO05D007309 1.2e-13 80.5 89 55.1
TAR334G0001 Trochodendron aralioides HOM05D006043 ORTHO05D007309 1.9e-11 73.2 83 53.0
TAR369G1076 Trochodendron aralioides HOM05D006043 ORTHO05D007309 1.9e-11 73.2 83 53.0
SMO358G0245 Selaginella moellendorffii HOM05D006043 ORTHO05D007309 6.9e-09 64.7 97 41.2
SEGI_20897 Sequoiadendron giganteum HOM05D006043 ORTHO05D007309 9.0e-09 64.3 106 41.5
AUR62037886 Chenopodium quinoa HOM05D006043 ORTHO05D007309 2.0e-08 63.2 138 31.2
Pp3c23_8320 Physcomitrium patens HOM05D053615 ORTHO05D007309 7.1e-06 54.7 113 38.1


User provided reference genes

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