Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG3G2310 Aethionema arabicum HOM05D005747 ORTHO05D007159 2.3e-54 215.3 107 100.0
AL6G12680 Arabidopsis lyrata HOM05D005747 ORTHO05D007159 3.0e-46 188.3 103 85.4
Thhalv10015093m.g Eutrema salsugineum HOM05D005747 ORTHO05D007159 3.0e-46 188.3 103 87.4
AT5G03345 Arabidopsis thaliana HOM05D005747 ORTHO05D007159 5.1e-46 187.6 103 85.4
CARHR210000 Cardamine hirsuta HOM05D005747 ORTHO05D007159 1.5e-45 186.0 103 85.4
Carub.0006s0216 Capsella rubella HOM05D005747 ORTHO05D007159 2.5e-45 185.3 103 83.5
THA.LOC104826911 Tarenaya hassleriana HOM05D005747 ORTHO05D007159 3.3e-45 184.9 107 81.3
Sp6g39390 Schrenkiella parvula HOM05D005747 ORTHO05D007159 9.5e-45 183.3 103 85.4
C02p00970 Brassica napus HOM05D001005 ORTHO05D000836 3.6e-44 181.4 103 84.5
BcaC03g13014 Brassica carinata HOM05D005747 ORTHO05D007159 1.1e-43 179.9 103 83.5
Eucgr.A01688 Eucalyptus grandis HOM05D005747 ORTHO05D007159 5.2e-43 177.6 105 78.1
PGR004G0006 Punica granatum HOM05D005747 ORTHO05D007159 4.4e-42 174.5 105 77.1
Ciclev10013173m.g Citrus clementina HOM05D005747 ORTHO05D007159 2.9e-41 171.8 107 73.8
Manes.08G009800 Manihot esculenta HOM05D005747 ORTHO05D007159 3.8e-41 171.4 105 77.1
Prupe.6G232700 Prunus persica HOM05D005747 ORTHO05D007159 6.4e-41 170.6 105 74.3
Atru.chr8.1820 Acer truncatum HOM05D005747 ORTHO05D007159 4.1e-40 167.9 107 73.8
Thecc.05G065200 Theobroma cacao HOM05D005747 ORTHO05D007159 5.4e-40 167.5 105 75.2
Glyma.13G143500 Glycine max HOM05D005747 ORTHO05D007159 7.1e-40 167.2 105 74.3
Potri.006G125300 Populus trichocarpa HOM05D005747 ORTHO05D007159 7.1e-40 167.2 104 76.0
MD04G1094200 Malus domestica HOM05D005747 ORTHO05D007159 1.2e-39 166.4 105 72.4
arahy.Tifrunner.gnm1.ann1.47U1LD Arachis hypogaea HOM05D005747 ORTHO05D007159 1.6e-39 166.0 105 75.2
arahy.Tifrunner.gnm1.ann1.548B55 Arachis hypogaea HOM05D005747 ORTHO05D007159 1.6e-39 166.0 105 75.2
arahy.Tifrunner.gnm1.ann1.GC88CS Arachis hypogaea HOM05D005747 ORTHO05D007159 2.1e-39 165.6 105 74.3
Hma1.2p1_0205F.1_g087080 Hydrangea macrophylla HOM05D005747 ORTHO05D007159 2.1e-39 165.6 104 76.9
Lalb_Chr02g0155891 Lupinus albus HOM05D005747 ORTHO05D007159 2.7e-39 165.2 104 72.1
MD12G1113800 Malus domestica HOM05D005747 ORTHO05D007159 2.7e-39 165.2 105 72.4
PSO063G6473 Papaver somniferum HOM05D005747 ORTHO05D007159 2.7e-39 165.2 105 72.4
PSO339G2391 Papaver somniferum HOM05D005747 ORTHO05D007159 2.7e-39 165.2 105 72.4
Glyma.10G057000 Glycine max HOM05D005747 ORTHO05D007159 4.6e-39 164.5 105 72.4
arahy.Tifrunner.gnm1.ann1.W5J3RK Arachis hypogaea HOM05D005747 ORTHO05D007159 6.0e-39 164.1 105 74.3
GSVIVG01025728001 Vitis vinifera HOM05D005747 ORTHO05D007159 7.8e-39 163.7 107 72.0
Aqoxy1G01163 Aquilegia oxysepala HOM05D005747 ORTHO05D007159 2.3e-38 162.2 105 72.4
Duzib093G2107 Durio zibethinus HOM05D005747 ORTHO05D007159 2.3e-38 162.2 105 72.4
QL07p043606 Quercus lobata HOM05D005747 ORTHO05D007159 3.0e-38 161.8 105 72.4
Haze_20552 Corylus avellana HOM05D005747 ORTHO05D007159 3.9e-38 161.4 105 73.3
Duzib128G1360 Durio zibethinus HOM05D005747 ORTHO05D007159 5.1e-38 161.0 105 71.4
EL10Ac1g00026 Beta vulgaris HOM05D005747 ORTHO05D007159 8.6e-38 160.2 107 72.0
CSS0033757 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 1.1e-37 159.8 105 73.3
Dinv37311 Davidia involucrata HOM05D005747 ORTHO05D007159 1.5e-37 159.5 105 74.3
Potri.016G091900 Populus trichocarpa HOM05D005747 ORTHO05D007159 1.5e-37 159.5 104 71.2
Actinidia28901 Actinidia chinensis HOM05D005747 ORTHO05D007159 1.9e-37 159.1 105 71.4
Peaxi162Scf00701g00029 Petunia axillaris HOM05D005747 ORTHO05D007159 1.9e-37 159.1 105 70.5
vmacro07288 Vaccinium macrocarpon HOM05D005747 ORTHO05D007159 1.9e-37 159.1 105 72.4
Actinidia08777 Actinidia chinensis HOM05D005747 ORTHO05D007159 2.5e-37 158.7 105 71.4
Haze_20124 Corylus avellana HOM05D005747 ORTHO05D007159 2.5e-37 158.7 105 70.5
FAN02G1695 Fragaria x ananassa HOM05D005747 ORTHO05D007159 2.5e-37 158.7 104 69.2
Cc06_g04180 Coffea canephora HOM05D005747 ORTHO05D007159 3.3e-37 158.3 105 72.4
Psat0s2933g0080 Pisum sativum HOM05D005747 ORTHO05D007159 3.3e-37 158.3 105 70.5
CSS0033637 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 4.3e-37 157.9 105 72.4
CsaV3_3G035950 Cucumis sativus L. HOM05D005747 ORTHO05D007159 4.3e-37 157.9 105 69.5
FAN05G2010 Fragaria x ananassa HOM05D005747 ORTHO05D007159 4.3e-37 157.9 104 69.2
Glyma.19G183500 Glycine max HOM05D005747 ORTHO05D007159 4.3e-37 157.9 105 68.6
Lj5g0010104 Lotus japonicus HOM05D005747 ORTHO05D007159 4.3e-37 157.9 104 71.2
Sed0019850 Sechium edule HOM05D005747 ORTHO05D007159 4.3e-37 157.9 105 69.5
CSS0022084 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 5.6e-37 157.5 105 72.4
Migut.L01698 Erythranthe guttata HOM05D005747 ORTHO05D007159 5.6e-37 157.5 105 70.5
RcHm_v2.0_Chr3g0470141 Rosa chinensis HOM05D005747 ORTHO05D007159 5.6e-37 157.5 104 69.2
TWI74G1168 Tripterygium wilfordii HOM05D005747 ORTHO05D007159 5.6e-37 157.5 105 70.5
MELO3C009353.2 Cucumis melo HOM05D005747 ORTHO05D007159 7.3e-37 157.1 105 68.6
FvH4_6g16280 Fragaria vesca HOM05D005747 ORTHO05D007159 7.3e-37 157.1 104 68.3
FAN14G5754 Fragaria x ananassa HOM05D005747 ORTHO05D007159 7.3e-37 157.1 104 68.3
Cfa020071 Carpinus fangiana HOM05D005747 ORTHO05D007159 9.6e-37 156.8 105 69.5
ClCG10G020160 Citrullus lanatus HOM05D005747 ORTHO05D007159 9.6e-37 156.8 105 68.6
TAR369G0407 Trochodendron aralioides HOM05D005747 ORTHO05D007159 9.6e-37 156.8 105 67.6
Nn7g38309 Nelumbo nucifera HOM05D005747 ORTHO05D007159 1.2e-36 156.4 105 69.5
TAR633G0139 Trochodendron aralioides HOM05D005747 ORTHO05D007159 1.2e-36 156.4 105 68.6
Sc02g0001670 Simmondsia chinensis HOM05D005747 ORTHO05D007159 1.6e-36 156.0 105 71.4
MSTRG.19175 Avicennia marina HOM05D005747 ORTHO05D007159 2.1e-36 155.6 104 70.2
FAN09G1333 Fragaria x ananassa HOM05D005747 ORTHO05D007159 2.1e-36 155.6 104 68.3
Rhsim03G0092400 Rhododendron simsii HOM05D005747 ORTHO05D007159 4.7e-36 154.5 105 70.5
Phvul.001G178800 Phaseolus vulgaris HOM05D005747 ORTHO05D007159 6.2e-36 154.1 105 65.7
Gohir.A09G147500 Gossypium hirsutum HOM05D005747 ORTHO05D007159 1.1e-35 153.3 105 69.5
TPR.G9369 Trifolium pratense HOM05D005747 ORTHO05D007159 1.1e-35 153.3 105 68.6
Manes.09G066900 Manihot esculenta HOM05D005747 ORTHO05D007159 1.4e-35 152.9 104 67.3
Medtr7g101880 Medicago truncatula HOM05D005747 ORTHO05D007159 1.4e-35 152.9 101 69.3
Psat6g073040 Pisum sativum HOM05D005747 ORTHO05D007159 1.4e-35 152.9 105 68.6
CAN.G900.40 Capsicum annuum HOM05D005747 ORTHO05D007159 1.8e-35 152.5 105 65.7
Gohir.D09G143100 Gossypium hirsutum HOM05D005747 ORTHO05D007159 1.8e-35 152.5 105 69.5
Gorai.006G164600 Gossypium raimondii HOM05D005747 ORTHO05D007159 1.8e-35 152.5 105 69.5
Solyc09g008140.3 Solanum lycopersicum HOM05D005747 ORTHO05D007159 1.8e-35 152.5 105 65.7
Sopen09g002940 Solanum pennellii HOM05D005747 ORTHO05D007159 1.8e-35 152.5 105 65.7
VMungo1383G0680 Vigna mungo HOM05D005747 ORTHO05D007159 2.4e-35 152.1 105 67.6
CANSAT80G0760 Cannabis sativa HOM05D005747 ORTHO05D007159 5.2e-35 151.0 105 66.7
SGA_v2.0_scaffold75G24844 Striga asiatica HOM05D005747 ORTHO05D007159 5.2e-35 151.0 103 69.9
Ca_11494_v3 Cicer arietinum L. HOM05D005747 ORTHO05D007159 9.0e-35 150.2 105 68.6
SalBow5G0179 Salvia bowleyana HOM05D005747 ORTHO05D007159 1.5e-34 149.4 105 65.7
SalBow5G1412 Salvia bowleyana HOM05D005747 ORTHO05D007159 1.5e-34 149.4 105 65.7
Phvul.007G149300 Phaseolus vulgaris HOM05D005747 ORTHO05D007159 2.0e-34 149.1 104 68.3
TWI77G0618 Tripterygium wilfordii HOM05D005747 ORTHO05D007159 2.6e-34 148.7 94 74.5
TPR.G25697 Trifolium pratense HOM05D005747 ORTHO05D007159 3.4e-34 148.3 101 69.3
Medtr1g063370 Medicago truncatula HOM05D005747 ORTHO05D007159 4.4e-34 147.9 105 66.7
Lalb_Chr20g0112621 Lupinus albus HOM05D005747 ORTHO05D007159 1.3e-33 146.4 105 64.8
Zm00001eb136890 Zea mays HOM05D005747 ORTHO05D007159 1.7e-33 146.0 104 66.3
Os12g0566400 Oryza sativa ssp. japonica HOM05D005747 ORTHO05D007159 6.4e-33 144.1 105 63.8
Zm00001eb028740 Zea mays HOM05D005747 ORTHO05D007159 6.4e-33 144.1 105 63.8
Ah.05g172440 Amaranthus hybridus HOM05D005747 ORTHO05D007159 1.1e-32 143.3 107 66.4
unitig_578.g16384 Utricularia gibba HOM05D005747 ORTHO05D007159 6.0e-31 137.5 97 66.0
Glyma.03G182900 Glycine max HOM05D005747 ORTHO05D007159 7.8e-31 137.1 134 53.0
HPP92_009808 Vanilla planifolia HOM05D005747 ORTHO05D007159 3.0e-30 135.2 92 69.6
Nitab4.5_0002632g0020 Nicotiana tabacum HOM05D005747 ORTHO05D007159 5.1e-30 134.4 105 61.0
Nitab4.5_0000578g0140 Nicotiana tabacum HOM05D005747 ORTHO05D007159 8.7e-30 133.7 105 60.0
CDE06G0870 Ceratophyllum demersum HOM05D005747 ORTHO05D007159 5.6e-29 131.0 94 64.9
PGSC0003DMG400003860 Solanum tuberosum HOM05D005747 ORTHO05D007159 5.6e-29 131.0 133 49.6
Lsat_1_v5_gn_6_25181 Lactuca sativa HOM05D005747 ORTHO05D007159 3.6e-28 128.3 103 59.2
ECA233G4120 Erigeron canadensis HOM05D005747 ORTHO05D007159 4.8e-28 127.9 103 57.3
Hma1.2p1_0205F.1_g087090 Hydrangea macrophylla HOM05D005747 ORTHO05D007159 1.1e-27 126.7 76 81.6
SMO137G0056 Selaginella moellendorffii HOM05D005747 ORTHO05D007159 1.4e-27 126.3 100 57.0
SEGI_15519 Sequoiadendron giganteum HOM05D005747 ORTHO05D007159 1.8e-27 125.9 93 62.4
HanXRQChr13g0401071 Helianthus annuus HOM05D005747 ORTHO05D007159 3.1e-27 125.2 105 54.3
HanXRQChr02g0051611 Helianthus annuus HOM05D005747 ORTHO05D007159 9.0e-27 123.6 104 56.7
Mapoly0011s0153 Marchantia polymorpha HOM05D005747 ORTHO05D007159 9.0e-27 123.6 98 59.2
Gorai.006G061900 Gossypium raimondii HOM05D005747 ORTHO05D007159 1.5e-26 122.9 107 57.9
Oeu053677.1 Olea europaea HOM05D005747 ORTHO05D007159 2.0e-26 122.5 78 75.6
AagrBONN_evm.TU.Sc2ySwM_362.1648 Anthoceros agrestis HOM05D005747 ORTHO05D007159 2.6e-26 122.1 90 61.1
Hund20347 Selenicereus undatus HOM05D005747 ORTHO05D007159 8.4e-25 117.1 76 72.4
DCAR_020822 Daucus carota HOM05D005747 ORTHO05D007159 2.4e-24 115.5 77 71.4
Lj2A1109T71 Lonicera japonica HOM05D005747 ORTHO05D007159 2.7e-23 112.1 75 69.3
Pp3c5_16080 Physcomitrium patens HOM05D005747 ORTHO05D007159 7.9e-23 110.5 94 55.3
Oeu045224.1 Olea europaea HOM05D005747 ORTHO05D007159 1.0e-22 110.2 86 66.3
Pp3c6_8930 Physcomitrium patens HOM05D005747 ORTHO05D007159 1.0e-22 110.2 93 53.8
Sabra16G0097500 Salix brachista HOM05D005747 ORTHO05D007159 1.0e-22 110.2 75 68.0
CSS0041044 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 3.9e-22 108.2 70 75.7
CSS0043170 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 3.9e-22 108.2 70 75.7
Sed0003931 Sechium edule HOM05D005747 ORTHO05D007159 1.9e-21 105.9 66 72.7
AUR62023620 Chenopodium quinoa HOM05D005747 ORTHO05D007159 3.1e-19 98.6 113 52.2
ATR0104G002 Amborella trichopoda HOM05D005747 ORTHO05D007159 5.3e-19 97.8 84 53.6
AUR62004704 Chenopodium quinoa HOM05D005747 ORTHO05D007159 2.6e-18 95.5 105 52.4
CiPaw.09G219400 Carya illinoinensis HOM05D005747 ORTHO05D007159 5.8e-18 94.4 106 50.0
Lalb_Chr02g0156001 Lupinus albus HOM05D005747 ORTHO05D007159 2.4e-16 89.0 79 59.5
Dinv35784 Davidia involucrata HOM05D005747 ORTHO05D007159 4.3e-13 78.2 50 76.0
COL.COLO4_26972 Corchorus olitorius HOM05D005747 ORTHO05D007159 5.6e-13 77.8 45 75.6
MCO03G507 Micromonas commoda HOM05D005747 ORTHO05D007159 1.5e-10 69.7 88 38.6
Os11g0568633 Oryza sativa ssp. japonica HOM05D005747 ORTHO05D007159 5.5e-08 61.2 42 59.5
Lalb_Chr25g0289001 Lupinus albus HOM05D005747 ORTHO05D007159 3.5e-07 58.5 49 57.1


User provided reference genes

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