Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG3G18570 Aethionema arabicum HOM05D006748 ORTHO05D008553 2.3e-54 215.3 108 100.0
AL6G18300 Arabidopsis lyrata HOM05D006748 ORTHO05D008553 6.2e-52 207.2 108 95.4
Thhalv10015079m.g Eutrema salsugineum HOM05D006748 ORTHO05D008553 6.9e-51 203.8 108 93.5
CARHR205230 Cardamine hirsuta HOM05D006748 ORTHO05D008553 1.5e-50 202.6 108 93.5
AT5G07960 Arabidopsis thaliana HOM05D006748 ORTHO05D008553 2.0e-50 202.2 108 93.5
BcaC06g32512 Brassica carinata HOM05D006748 ORTHO05D008553 2.0e-50 202.2 108 92.6
C09p68960 Brassica napus HOM05D006748 ORTHO05D008553 5.8e-50 200.7 108 91.7
BcaC03g13204 Brassica carinata HOM05D006748 ORTHO05D008553 7.6e-50 200.3 107 91.6
C02p03380 Brassica napus HOM05D006748 ORTHO05D008553 7.6e-50 200.3 107 91.6
BolC2t06300H Brassica oleracea HOM05D006748 ORTHO05D008553 7.6e-50 200.3 107 91.6
Carub.0006s0686 Capsella rubella HOM05D006748 ORTHO05D008553 9.9e-50 199.9 108 91.7
BcaB05g21592 Brassica carinata HOM05D006748 ORTHO05D008553 1.7e-49 199.1 108 91.7
BraA02t04939Z Brassica rapa HOM05D006748 ORTHO05D008553 2.2e-49 198.7 107 90.7
BolC9t59641H Brassica oleracea HOM05D006748 ORTHO05D008553 1.4e-48 196.1 108 90.7
THA.LOC104818341 Tarenaya hassleriana HOM05D006748 ORTHO05D008553 9.3e-48 193.4 108 88.0
Sp6g34980 Schrenkiella parvula HOM05D006748 ORTHO05D008553 1.0e-46 189.9 102 93.1
CANSAT80G2841 Cannabis sativa HOM05D006748 ORTHO05D008553 4.9e-41 171.0 105 79.0
Nn3g17423 Nelumbo nucifera HOM05D006748 ORTHO05D008553 1.2e-39 166.4 100 80.0
CiPaw.12G007800 Carya illinoinensis HOM05D006748 ORTHO05D008553 2.1e-39 165.6 105 78.1
Manes.06G086100 Manihot esculenta HOM05D006748 ORTHO05D008553 2.7e-39 165.2 110 77.3
Haze_07696 Corylus avellana HOM05D006748 ORTHO05D008553 3.5e-39 164.9 105 77.1
Gohir.A12G181700 Gossypium hirsutum HOM05D006748 ORTHO05D008553 3.5e-39 164.9 108 75.0
Gohir.D12G184500 Gossypium hirsutum HOM05D006748 ORTHO05D008553 3.5e-39 164.9 108 75.0
Gorai.008G197900 Gossypium raimondii HOM05D006748 ORTHO05D008553 3.5e-39 164.9 108 75.0
Cfa019312 Carpinus fangiana HOM05D006748 ORTHO05D008553 4.6e-39 164.5 105 76.2
Thecc.03G099400 Theobroma cacao HOM05D006748 ORTHO05D008553 4.6e-39 164.5 108 74.1
Hma1.2p1_0060F.1_g033230 Hydrangea macrophylla HOM05D006748 ORTHO05D008553 7.9e-39 163.7 107 73.8
Eucgr.K02517 Eucalyptus grandis HOM05D006748 ORTHO05D008553 1.0e-38 163.3 105 76.2
QL10p019141 Quercus lobata HOM05D006748 ORTHO05D008553 1.8e-38 162.5 103 75.7
Hund09880 Selenicereus undatus HOM05D006748 ORTHO05D008553 1.8e-38 162.5 107 75.7
PSO541G5074 Papaver somniferum HOM05D006748 ORTHO05D008553 2.3e-38 162.2 106 75.5
PSO675G4773 Papaver somniferum HOM05D006748 ORTHO05D008553 2.3e-38 162.2 106 75.5
Cpa.g.sc94.24 Carica papaya HOM05D006748 ORTHO05D008553 3.0e-38 161.8 105 76.2
Duzib084G0059 Durio zibethinus HOM05D006748 ORTHO05D008553 3.0e-38 161.8 108 73.1
Potri.015G056300 Populus trichocarpa HOM05D006748 ORTHO05D008553 3.0e-38 161.8 108 74.1
TWI81G0385 Tripterygium wilfordii HOM05D006748 ORTHO05D008553 1.1e-37 159.8 103 72.8
Dinv10524 Davidia involucrata HOM05D006748 ORTHO05D008553 1.9e-37 159.1 108 74.1
TAR622G0828 Trochodendron aralioides HOM05D006748 ORTHO05D008553 1.9e-37 159.1 108 70.4
Ciclev10023002m.g Citrus clementina HOM05D006748 ORTHO05D008553 2.5e-37 158.7 105 77.1
Potri.012G065500 Populus trichocarpa HOM05D006748 ORTHO05D008553 4.3e-37 157.9 108 72.2
Actinidia35032 Actinidia chinensis HOM05D006748 ORTHO05D008553 7.4e-37 157.1 107 72.9
ClCG06G015720 Citrullus lanatus HOM05D006748 ORTHO05D008553 1.6e-36 156.0 101 76.2
MD14G1210100 Malus domestica HOM05D006748 ORTHO05D008553 2.2e-36 155.6 100 74.0
unitig_750.g28509 Utricularia gibba HOM05D006748 ORTHO05D008553 2.2e-36 155.6 102 75.5
CSS0043022 Camellia sinensis var. sinensis HOM05D006748 ORTHO05D008553 2.8e-36 155.2 103 72.8
RcHm_v2.0_Chr7g0182761 Rosa chinensis HOM05D006748 ORTHO05D008553 2.8e-36 155.2 99 72.7
Hund02598 Selenicereus undatus HOM05D006748 ORTHO05D008553 2.8e-36 155.2 103 72.8
Solyc06g069520.3 Solanum lycopersicum HOM05D006748 ORTHO05D008553 2.8e-36 155.2 100 77.0
Sopen06g026810 Solanum pennellii HOM05D006748 ORTHO05D008553 2.8e-36 155.2 100 77.0
Oeu008258.1 Olea europaea HOM05D006748 ORTHO05D008553 3.7e-36 154.8 100 76.0
Sed0010236 Sechium edule HOM05D006748 ORTHO05D008553 4.8e-36 154.5 101 74.3
CsaV3_1G002810 Cucumis sativus L. HOM05D006748 ORTHO05D008553 6.3e-36 154.1 101 75.2
PGR044G1724 Punica granatum HOM05D006748 ORTHO05D008553 8.2e-36 153.7 105 73.3
Atru.chr9.414 Acer truncatum HOM05D006748 ORTHO05D008553 1.1e-35 153.3 105 72.4
Peaxi162Scf00702g00422 Petunia axillaris HOM05D006748 ORTHO05D008553 1.1e-35 153.3 100 76.0
Nitab4.5_0005160g0020 Nicotiana tabacum HOM05D006748 ORTHO05D008553 1.8e-35 152.5 100 75.0
Nitab4.5_0011867g0020 Nicotiana tabacum HOM05D006748 ORTHO05D008553 1.8e-35 152.5 100 75.0
Lalb_Chr09g0334301 Lupinus albus HOM05D006748 ORTHO05D008553 3.1e-35 151.8 101 67.3
GSVIVG01007891001 Vitis vinifera HOM05D006748 ORTHO05D008553 3.1e-35 151.8 106 73.6
MSTRG.22979 Avicennia marina HOM05D006748 ORTHO05D008553 4.1e-35 151.4 100 76.0
FAN13G1579 Fragaria x ananassa HOM05D006748 ORTHO05D008553 4.1e-35 151.4 97 74.2
FvH4_5g14060 Fragaria vesca HOM05D006748 ORTHO05D008553 5.3e-35 151.0 97 74.2
MD06G1200600 Malus domestica HOM05D006748 ORTHO05D008553 5.3e-35 151.0 100 71.0
Ca_18978_v3 Cicer arietinum L. HOM05D006748 ORTHO05D008553 6.9e-35 150.6 100 70.0
Migut.I00325 Erythranthe guttata HOM05D006748 ORTHO05D008553 6.9e-35 150.6 102 77.5
Lj5A105G56 Lonicera japonica HOM05D006748 ORTHO05D008553 9.0e-35 150.2 105 69.5
Os03g0756800 Oryza sativa ssp. japonica HOM05D006748 ORTHO05D008553 9.0e-35 150.2 100 67.0
TWI60G0647 Tripterygium wilfordii HOM05D006748 ORTHO05D008553 9.0e-35 150.2 103 69.9
FvH4_5g14160 Fragaria vesca HOM05D006748 ORTHO05D008553 1.2e-34 149.8 97 73.2
Psat5g203080 Pisum sativum HOM05D006748 ORTHO05D008553 1.2e-34 149.8 100 69.0
Zm00001eb057720 Zea mays HOM05D006748 ORTHO05D008553 1.2e-34 149.8 106 65.1
Cc10_g05660 Coffea canephora HOM05D006748 ORTHO05D008553 1.5e-34 149.4 101 73.3
SGA_v2.0_scaffold49G18162 Striga asiatica HOM05D006748 ORTHO05D008553 2.0e-34 149.1 92 77.2
TPR.G12215 Trifolium pratense HOM05D006748 ORTHO05D008553 3.4e-34 148.3 100 69.0
HanXRQChr02g0044721 Helianthus annuus HOM05D006748 ORTHO05D008553 4.5e-34 147.9 99 70.7
SHI30118 Sapria himalayana HOM05D006748 ORTHO05D008553 4.5e-34 147.9 91 76.9
Lj1g0012744 Lotus japonicus HOM05D006748 ORTHO05D008553 1.3e-33 146.4 96 69.8
Glyma.06G201800 Glycine max HOM05D006748 ORTHO05D008553 1.7e-33 146.0 101 66.3
Lsat_1_v5_gn_1_13560 Lactuca sativa HOM05D006748 ORTHO05D008553 1.7e-33 146.0 98 69.4
HPP92_019473 Vanilla planifolia HOM05D006748 ORTHO05D008553 1.7e-33 146.0 92 73.9
Phvul.009G193300 Phaseolus vulgaris HOM05D006748 ORTHO05D008553 2.2e-33 145.6 101 66.3
Sed0016176 Sechium edule HOM05D006748 ORTHO05D008553 2.9e-33 145.2 101 69.3
QL09p026979 Quercus lobata HOM05D006748 ORTHO05D008553 5.0e-33 144.4 135 57.0
Medtr3g024170 Medicago truncatula HOM05D006748 ORTHO05D008553 6.5e-33 144.1 101 65.3
Medtr3g024190 Medicago truncatula HOM05D006748 ORTHO05D008553 6.5e-33 144.1 101 65.3
ECA247G1600 Erigeron canadensis HOM05D006748 ORTHO05D008553 1.1e-32 143.3 99 66.7
EL10Ac5g11112 Beta vulgaris HOM05D006748 ORTHO05D008553 1.4e-32 142.9 101 73.3
Lalb_Chr16g0391551 Lupinus albus HOM05D006748 ORTHO05D008553 4.2e-32 141.4 96 66.7
Sc12g0006600 Simmondsia chinensis HOM05D006748 ORTHO05D008553 3.9e-30 134.8 79 84.8
Actinidia19003 Actinidia chinensis HOM05D006748 ORTHO05D008553 5.7e-29 131.0 151 50.3
SGA_v2.0_scaffold25G10944 Striga asiatica HOM05D006748 ORTHO05D008553 2.8e-28 128.6 81 76.5
Manes.14G084550 Manihot esculenta HOM05D006748 ORTHO05D008553 1.1e-27 126.7 87 71.3
Aqoxy3G03609 Aquilegia oxysepala HOM05D006748 ORTHO05D008553 4.1e-27 124.8 100 62.0
SMO201G0125 Selaginella moellendorffii HOM05D006748 ORTHO05D008553 2.0e-26 122.5 94 60.6
vmacro16507 Vaccinium macrocarpon HOM05D006748 ORTHO05D008553 4.5e-26 121.3 86 67.4
HPP92_006054 Vanilla planifolia HOM05D006748 ORTHO05D008553 4.5e-26 121.3 90 62.2
CDE05G0122 Ceratophyllum demersum HOM05D006748 ORTHO05D008553 1.0e-25 120.2 105 61.0
arahy.Tifrunner.gnm1.ann1.HPW464 Arachis hypogaea HOM05D006748 ORTHO05D008553 1.7e-25 119.4 87 67.8
Rhsim12G0151700 Rhododendron simsii HOM05D006748 ORTHO05D008553 2.2e-25 119.0 86 69.8
VMungo1309G2295 Vigna mungo HOM05D006748 ORTHO05D008553 3.8e-25 118.2 80 70.0
BraA10t44914Z Brassica rapa HOM05D006748 ORTHO05D008553 1.4e-24 116.3 58 94.8
ATR0064G062 Amborella trichopoda HOM05D006748 ORTHO05D008553 3.2e-24 115.2 86 65.1
A10p28650 Brassica napus HOM05D006748 ORTHO05D008553 6.1e-23 110.9 82 68.3
AUR62008510 Chenopodium quinoa HOM05D006748 ORTHO05D008553 6.1e-23 110.9 81 70.4
AUR62021580 Chenopodium quinoa HOM05D006748 ORTHO05D008553 1.8e-22 109.4 77 72.7
Mapoly0019s0070 Marchantia polymorpha HOM05D006748 ORTHO05D008553 1.8e-22 109.4 88 60.2
CBR_g90015 Chara braunii HOM05D006748 ORTHO05D008553 9.7e-21 103.6 86 54.7
Sabra15G0081500 Salix brachista HOM05D006748 ORTHO05D008553 9.7e-21 103.6 85 62.4
AagrBONN_evm.TU.Sc2ySwM_117.1931 Anthoceros agrestis HOM05D006748 ORTHO05D008553 1.1e-19 100.1 74 63.5
Pp3c14_26790 Physcomitrium patens HOM05D006748 ORTHO05D008553 1.4e-19 99.8 95 52.6
HanXRQChr16g0510351 Helianthus annuus HOM05D006748 ORTHO05D008553 5.3e-19 97.8 70 65.7
MELO3C017217.2 Cucumis melo HOM05D006748 ORTHO05D008553 9.1e-19 97.1 56 83.9
HanXRQChr14g0449601 Helianthus annuus HOM05D006748 ORTHO05D008553 1.1e-13 80.1 56 69.6
COL.COLO4_37587 Corchorus olitorius HOM05D006748 ORTHO05D008553 3.5e-10 68.6 53 62.3
CDE02G4382 Ceratophyllum demersum HOM05D006748 ORTHO05D008553 3.6e-07 58.5 53 56.6
SEGI_29622 Sequoiadendron giganteum HOM05D006748 ORTHO05D008553 6.1e-07 57.8 45 57.8


User provided reference genes

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