Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG3G1800 Aethionema arabicum HOM05D007483 ORTHO05D009133 4.6e-91 337.8 162 100.0
Thhalv10021669m.g Eutrema salsugineum HOM05D007483 ORTHO05D009133 2.1e-64 249.2 155 80.0
AL3G20460 Arabidopsis lyrata HOM05D007483 ORTHO05D009133 2.2e-61 239.2 152 75.7
AT3G09310 Arabidopsis thaliana HOM05D007483 ORTHO05D009133 1.1e-60 236.9 150 77.3
BraA05t22748Z Brassica rapa HOM05D007483 ORTHO05D009133 3.2e-60 235.3 155 75.5
A05p39660 Brassica napus HOM05D007483 ORTHO05D009133 7.1e-60 234.2 155 75.5
Carub.0003s0842 Capsella rubella HOM05D007483 ORTHO05D009133 9.3e-60 233.8 156 73.1
Sp3g07690 Schrenkiella parvula HOM05D007483 ORTHO05D009133 1.2e-59 233.4 155 75.5
CARHR083670 Cardamine hirsuta HOM05D007483 ORTHO05D009133 1.5e-57 226.5 161 72.0
BcaC05g29659 Brassica carinata HOM05D007483 ORTHO05D009133 4.3e-57 224.9 155 74.2
C05p58700 Brassica napus HOM05D007483 ORTHO05D009133 7.4e-57 224.2 155 72.3
BolC5t34519H Brassica oleracea HOM05D007483 ORTHO05D009133 7.4e-57 224.2 155 72.3
BcaC05g29522 Brassica carinata HOM05D007483 ORTHO05D009133 1.6e-56 223.0 155 71.6
THA.LOC104816252 Tarenaya hassleriana HOM05D007483 ORTHO05D009133 1.1e-49 200.3 151 67.5
FAN09G2152 Fragaria x ananassa HOM05D007483 ORTHO05D009133 4.3e-41 171.8 148 58.1
QL07p048670 Quercus lobata HOM05D007483 ORTHO05D009133 7.4e-41 171.0 152 55.3
Thecc.05G037700 Theobroma cacao HOM05D007483 ORTHO05D009133 1.3e-40 170.2 156 55.8
Lalb_Chr07g0193781 Lupinus albus HOM05D007483 ORTHO05D009133 4.8e-40 168.3 137 63.5
Medtr4g021820 Medicago truncatula HOM05D007483 ORTHO05D009133 4.8e-40 168.3 127 61.4
Cfa016672 Carpinus fangiana HOM05D007483 ORTHO05D009133 6.3e-40 167.9 154 57.1
FAN14G1457 Fragaria x ananassa HOM05D007483 ORTHO05D009133 6.3e-40 167.9 148 57.4
Phvul.010G011100 Phaseolus vulgaris HOM05D007483 ORTHO05D009133 6.3e-40 167.9 141 60.3
Duzib093G2195 Durio zibethinus HOM05D007483 ORTHO05D009133 8.2e-40 167.5 157 56.7
Ca_05061_v3 Cicer arietinum L. HOM05D007483 ORTHO05D009133 1.4e-39 166.8 125 66.4
FAN02G3616 Fragaria x ananassa HOM05D007483 ORTHO05D009133 2.4e-39 166.0 148 56.8
FAN05G4215 Fragaria x ananassa HOM05D007483 ORTHO05D009133 3.1e-39 165.6 148 56.1
RcHm_v2.0_Chr3g0466381 Rosa chinensis HOM05D007483 ORTHO05D009133 3.1e-39 165.6 147 58.5
Gohir.A12G221500 Gossypium hirsutum HOM05D007483 ORTHO05D009133 4.1e-39 165.2 155 55.5
Gohir.D12G223900 Gossypium hirsutum HOM05D007483 ORTHO05D009133 4.1e-39 165.2 155 55.5
Eucgr.A01276 Eucalyptus grandis HOM05D007483 ORTHO05D009133 1.2e-38 163.7 153 58.8
Lj3g0014039 Lotus japonicus HOM05D007483 ORTHO05D009133 1.2e-38 163.7 132 60.6
CiPaw.09G194400 Carya illinoinensis HOM05D007483 ORTHO05D009133 1.5e-38 163.3 101 74.3
CAN.G324.11 Capsicum annuum HOM05D007483 ORTHO05D009133 2.0e-38 162.9 144 56.2
MSTRG.19078 Avicennia marina HOM05D007483 ORTHO05D009133 4.5e-38 161.8 152 57.2
arahy.Tifrunner.gnm1.ann1.29J2UD Arachis hypogaea HOM05D007483 ORTHO05D009133 1.3e-37 160.2 91 78.0
Cfa017361 Carpinus fangiana HOM05D007483 ORTHO05D009133 1.7e-37 159.8 156 51.9
PSO063G2390 Papaver somniferum HOM05D007483 ORTHO05D009133 2.2e-37 159.5 91 79.1
GSVIVG01034153001 Vitis vinifera HOM05D007483 ORTHO05D009133 2.2e-37 159.5 97 73.2
Nn2g13380 Nelumbo nucifera HOM05D007483 ORTHO05D009133 2.9e-37 159.1 85 78.8
Aqoxy1G00916 Aquilegia oxysepala HOM05D007483 ORTHO05D009133 5.0e-37 158.3 139 55.4
ClCG04G008120 Citrullus lanatus HOM05D007483 ORTHO05D009133 5.0e-37 158.3 99 72.7
Manes.08G088800 Manihot esculenta HOM05D007483 ORTHO05D009133 6.5e-37 157.9 103 71.8
Nitab4.5_0000216g0380 Nicotiana tabacum HOM05D007483 ORTHO05D009133 8.5e-37 157.5 83 80.7
AUR62025813 Chenopodium quinoa HOM05D007483 ORTHO05D009133 1.1e-36 157.1 89 75.3
Glyma.03G066000 Glycine max HOM05D007483 ORTHO05D009133 1.1e-36 157.1 132 59.1
TWI74G0092 Tripterygium wilfordii HOM05D007483 ORTHO05D009133 1.1e-36 157.1 158 55.1
VMungo0331G1516 Vigna mungo HOM05D007483 ORTHO05D009133 1.1e-36 157.1 154 55.8
Migut.J00322 Erythranthe guttata HOM05D007483 ORTHO05D009133 1.4e-36 156.8 136 57.4
Sopen10g034250 Solanum pennellii HOM05D007483 ORTHO05D009133 1.4e-36 156.8 109 64.2
EL10Ac6g14169 Beta vulgaris HOM05D007483 ORTHO05D009133 1.9e-36 156.4 131 60.3
Sed0013393 Sechium edule HOM05D007483 ORTHO05D009133 2.5e-36 156.0 146 52.7
Dinv35587 Davidia involucrata HOM05D007483 ORTHO05D009133 4.2e-36 155.2 156 55.1
MD12G1143600 Malus domestica HOM05D007483 ORTHO05D009133 4.2e-36 155.2 150 51.3
arahy.Tifrunner.gnm1.ann1.A9IP9X Arachis hypogaea HOM05D007483 ORTHO05D009133 7.2e-36 154.5 135 56.3
Prupe.6G257100 Prunus persica HOM05D007483 ORTHO05D009133 7.2e-36 154.5 150 51.3
Actinidia13151 Actinidia chinensis HOM05D007483 ORTHO05D009133 9.4e-36 154.1 140 58.6
Os11g0706100 Oryza sativa ssp. japonica HOM05D007483 ORTHO05D009133 9.4e-36 154.1 84 77.4
Sabra16G0100900 Salix brachista HOM05D007483 ORTHO05D009133 1.2e-35 153.7 94 73.4
PSO339G1657 Papaver somniferum HOM05D007483 ORTHO05D009133 2.1e-35 152.9 91 78.0
Potri.016G099700 Populus trichocarpa HOM05D007483 ORTHO05D009133 2.7e-35 152.5 75 88.0
TPR.G7337 Trifolium pratense HOM05D007483 ORTHO05D009133 2.7e-35 152.5 160 52.5
Ah.06g191870 Amaranthus hybridus HOM05D007483 ORTHO05D009133 7.9e-35 151.0 83 78.3
SEGI_13406 Sequoiadendron giganteum HOM05D007483 ORTHO05D009133 7.9e-35 151.0 81 81.5
Zm00001eb164460 Zea mays HOM05D007483 ORTHO05D009133 7.9e-35 151.0 84 73.8
SGA_v2.0_scaffold126G33776 Striga asiatica HOM05D007483 ORTHO05D009133 1.4e-34 150.2 127 59.8
CANSAT11G2488 Cannabis sativa HOM05D007483 ORTHO05D009133 2.3e-34 149.4 91 70.3
ECA247G0729 Erigeron canadensis HOM05D001424 ORTHO05D009133 2.3e-34 149.4 150 49.3
Lsat_1_v5_gn_9_30381 Lactuca sativa HOM05D007483 ORTHO05D009133 8.8e-34 147.5 76 82.9
Cc06_g02530 Coffea canephora HOM05D007483 ORTHO05D009133 1.1e-33 147.1 84 77.4
HanXRQChr16g0497811 Helianthus annuus HOM05D007483 ORTHO05D009133 1.5e-33 146.7 100 65.0
unitig_744.g24653 Utricularia gibba HOM05D000968 ORTHO05D003096 3.3e-33 145.6 152 50.7
Mapoly0019s0017 Marchantia polymorpha HOM05D007483 ORTHO05D009133 5.7e-33 144.8 111 60.4
Hund10634 Selenicereus undatus HOM05D007483 ORTHO05D009133 7.4e-33 144.4 162 48.8
HPP92_019244 Vanilla planifolia HOM05D007483 ORTHO05D009133 9.7e-33 144.1 99 62.6
CBR_g19672 Chara braunii HOM05D007483 ORTHO05D009133 1.7e-32 143.3 85 72.9
Pp3c15_21390 Physcomitrium patens HOM05D007483 ORTHO05D009133 2.2e-32 142.9 103 61.2
Cpa.g.sc169.23 Carica papaya HOM05D007483 ORTHO05D009133 2.4e-31 139.4 87 72.4
Solyc10g084810.3 Solanum lycopersicum HOM05D007483 ORTHO05D009133 1.2e-30 137.1 67 83.6
AagrBONN_evm.TU.Sc2ySwM_228.2371 Anthoceros agrestis HOM05D007483 ORTHO05D009133 1.6e-30 136.7 102 63.7
DCAR_028750 Daucus carota HOM05D007483 ORTHO05D009133 2.6e-30 136.0 66 84.8
Oeu007795.1 Olea europaea HOM05D007483 ORTHO05D009133 2.6e-30 136.0 66 86.4
TAR636G3143 Trochodendron aralioides HOM05D007483 ORTHO05D009133 5.9e-30 134.8 147 51.7
Ciclev10012381m.g Citrus clementina HOM05D007483 ORTHO05D009133 6.5e-29 131.3 168 44.0
PGSC0003DMG400011065 Solanum tuberosum HOM05D007483 ORTHO05D009133 1.1e-28 130.6 131 51.9
CsaV3_4G025070 Cucumis sativus L. HOM05D007483 ORTHO05D009133 2.5e-28 129.4 102 61.8
FvH4_6g13510 Fragaria vesca HOM05D007483 ORTHO05D009133 4.2e-28 128.6 148 46.6
MBI05_g28376_MAGBIO Magnolia biondii HOM05D007483 ORTHO05D009133 4.2e-28 128.6 72 79.2
Rhsim04G0158000 Rhododendron simsii HOM05D007483 ORTHO05D009133 1.2e-27 127.1 72 77.8
ATR0559G251 Amborella trichopoda HOM05D007483 ORTHO05D009133 2.7e-27 125.9 96 62.5
Sabra13G0104100 Salix brachista HOM05D007483 ORTHO05D009133 3.6e-27 125.6 93 65.6
Nitab4.5_0000202g0060 Nicotiana tabacum HOM05D007483 ORTHO05D009133 8.0e-27 124.4 69 78.3
Os02g0260400 Oryza sativa ssp. japonica HOM05D007483 ORTHO05D009133 2.3e-26 122.9 61 82.0
Lj2A93G81 Lonicera japonica HOM05D007483 ORTHO05D009133 5.2e-26 121.7 145 50.3
MELO3C033192.2 Cucumis melo HOM05D007483 ORTHO05D009133 5.7e-25 118.2 66 78.8
Cre17.g720183 Chlamydomonas reinhardtii HOM05D007483 ORTHO05D009133 4.1e-23 112.1 76 57.9
Peaxi162Scf00094g01112 Petunia axillaris HOM05D007483 ORTHO05D009133 3.5e-22 109.0 69 71.0
SMO165G0096 Selaginella moellendorffii HOM05D007483 ORTHO05D009133 1.0e-21 107.5 66 71.2
PRCOL_00002574 Prasinoderma coloniale HOM05D007483 ORTHO05D009133 3.2e-20 102.4 81 61.7
MCO07G608 Micromonas commoda HOM05D007483 ORTHO05D009133 5.2e-18 95.1 63 57.1
Psat2g094360 Pisum sativum HOM05D007483 ORTHO05D009133 6.8e-18 94.7 65 69.2
CBR_g19673 Chara braunii HOM05D007483 ORTHO05D009133 6.3e-08 61.6 37 73.0


User provided reference genes

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