Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG3G17730 Aethionema arabicum HOM05D006279 ORTHO05D008055 2.0e-53 212.2 114 100.0
Thhalv10015068m.g Eutrema salsugineum HOM05D006279 ORTHO05D008055 4.9e-39 164.5 113 74.3
AL6G19660 Arabidopsis lyrata HOM05D006279 ORTHO05D008055 1.1e-38 163.3 111 75.7
Sp6g34040 Schrenkiella parvula HOM05D006279 ORTHO05D008055 9.2e-38 160.2 112 73.2
C09p68090 Brassica napus HOM05D004285 ORTHO05D005176 6.0e-37 157.5 109 73.4
C09p68110 Brassica napus HOM05D006279 ORTHO05D008055 6.0e-37 157.5 109 73.4
C09p68150 Brassica napus HOM05D006279 ORTHO05D008055 6.0e-37 157.5 109 73.4
Carub.0006s0782 Capsella rubella HOM05D006279 ORTHO05D008055 7.8e-37 157.1 109 74.3
AT5G09270 Arabidopsis thaliana HOM05D006279 ORTHO05D008055 1.0e-36 156.8 107 72.9
BcaB05g21561 Brassica carinata HOM05D006279 ORTHO05D008055 1.7e-36 156.0 110 71.8
CARHR204140 Cardamine hirsuta HOM05D006279 ORTHO05D008055 5.1e-36 154.5 113 73.5
BraA02t04974Z Brassica rapa HOM05D006279 ORTHO05D008055 6.6e-36 154.1 112 69.6
THA.LOC104818424 Tarenaya hassleriana HOM05D006279 ORTHO05D008055 8.6e-36 153.7 112 68.8
BolC2t06340H Brassica oleracea HOM05D006279 ORTHO05D008055 1.1e-35 153.3 110 70.9
BraA10t44844Z Brassica rapa HOM05D006279 ORTHO05D008055 1.1e-35 153.3 112 69.6
C09p68050 Brassica napus HOM05D006279 ORTHO05D008055 1.5e-35 152.9 107 72.9
BcaB08g37221 Brassica carinata HOM05D006279 ORTHO05D008055 4.7e-34 147.9 112 67.0
BcaC03g13247 Brassica carinata HOM05D006279 ORTHO05D008055 6.2e-34 147.5 112 69.6
C02p03790 Brassica napus HOM05D006279 ORTHO05D008055 6.2e-34 147.5 112 69.6
BolC9t59565H Brassica oleracea HOM05D004285 ORTHO05D005176 8.1e-34 147.1 109 68.8
A10p27950 Brassica napus HOM05D004285 ORTHO05D005176 1.2e-32 143.3 108 68.5
QL10p041722 Quercus lobata HOM05D006279 ORTHO05D008055 2.6e-24 115.5 106 52.8
RcHm_v2.0_Chr2g0163441 Rosa chinensis HOM05D006279 ORTHO05D008055 7.6e-24 114.0 81 64.2
Atru.chr1.2785 Acer truncatum HOM05D006279 ORTHO05D008055 9.9e-24 113.6 112 52.7
FAN09G2945 Fragaria x ananassa HOM05D006279 ORTHO05D008055 1.3e-23 113.2 86 61.6
Dinv44192 Davidia involucrata HOM05D006279 ORTHO05D008055 1.7e-23 112.8 86 61.6
Prupe.3G241300 Prunus persica HOM05D006279 ORTHO05D008055 2.9e-23 112.1 81 64.2
vmacro12040 Vaccinium macrocarpon HOM05D006279 ORTHO05D008055 3.8e-23 111.7 85 63.5
FvH4_6g45500 Fragaria vesca HOM05D006279 ORTHO05D008055 4.9e-23 111.3 86 61.6
FAN14G0828 Fragaria x ananassa HOM05D006279 ORTHO05D008055 4.9e-23 111.3 86 61.6
Thecc.08G189700 Theobroma cacao HOM05D006279 ORTHO05D008055 1.1e-22 110.2 112 52.7
TAR623G0329 Trochodendron aralioides HOM05D006279 ORTHO05D008055 1.4e-22 109.8 112 53.6
FAN05G3461 Fragaria x ananassa HOM05D006279 ORTHO05D008055 4.2e-22 108.2 117 49.6
vmacro13565 Vaccinium macrocarpon HOM05D006279 ORTHO05D008055 4.2e-22 108.2 85 61.2
EL10Ac4g09617 Beta vulgaris HOM05D006279 ORTHO05D008055 5.4e-22 107.8 86 59.3
Cc09_g10080 Coffea canephora HOM05D006279 ORTHO05D008055 7.1e-22 107.5 107 50.5
Haze_02674 Corylus avellana HOM05D006279 ORTHO05D008055 9.3e-22 107.1 104 50.0
MD09G1082400 Malus domestica HOM05D006279 ORTHO05D008055 9.3e-22 107.1 108 50.9
Sc09g0002260 Simmondsia chinensis HOM05D006279 ORTHO05D008055 9.3e-22 107.1 110 48.2
Haze_02661 Corylus avellana HOM05D006279 ORTHO05D008055 2.1e-21 105.9 104 49.0
Duzib177G0075 Durio zibethinus HOM05D006279 ORTHO05D008055 2.7e-21 105.5 112 50.9
Gohir.D05G287900 Gossypium hirsutum HOM05D006279 ORTHO05D008055 2.7e-21 105.5 112 48.2
Gorai.009G302900 Gossypium raimondii HOM05D006279 ORTHO05D008055 2.7e-21 105.5 112 48.2
Hma1.2p1_0847F.1_g227850 Hydrangea macrophylla HOM05D006279 ORTHO05D008055 2.7e-21 105.5 86 58.1
Gohir.A05G286900 Gossypium hirsutum HOM05D006279 ORTHO05D008055 3.5e-21 105.1 112 48.2
TAR369G0312 Trochodendron aralioides HOM05D006279 ORTHO05D008055 3.5e-21 105.1 105 49.5
Cpa.g.sc2692.1 Carica papaya HOM05D006279 ORTHO05D008055 4.6e-21 104.8 105 50.5
TPR.G17035 Trifolium pratense HOM05D006279 ORTHO05D008055 4.6e-21 104.8 109 52.3
Psat6g191840 Pisum sativum HOM05D006279 ORTHO05D008055 7.8e-21 104.0 98 50.0
MD10G1003300 Malus domestica HOM05D006279 ORTHO05D008055 1.0e-20 103.6 107 51.4
CSS0021017 Camellia sinensis var. sinensis HOM05D006279 ORTHO05D008055 2.3e-20 102.4 105 49.5
Cfa011174 Carpinus fangiana HOM05D006279 ORTHO05D008055 2.3e-20 102.4 104 49.0
ClCG02G000360 Citrullus lanatus HOM05D006279 ORTHO05D008055 2.3e-20 102.4 110 47.3
Ah.06g190980 Amaranthus hybridus HOM05D006279 ORTHO05D008055 3.0e-20 102.1 97 51.5
Eucgr.I00130 Eucalyptus grandis HOM05D006279 ORTHO05D008055 3.0e-20 102.1 101 52.5
Nn2g15145 Nelumbo nucifera HOM05D006279 ORTHO05D008055 3.0e-20 102.1 86 54.7
Potri.005G066900 Populus trichocarpa HOM05D006279 ORTHO05D008055 3.9e-20 101.7 112 50.0
Ca_13203_v3 Cicer arietinum L. HOM05D006279 ORTHO05D008055 5.1e-20 101.3 96 51.0
CsaV3_2G019480 Cucumis sativus L. HOM05D006279 ORTHO05D008055 5.1e-20 101.3 90 53.3
Psat4g003200 Pisum sativum HOM05D006279 ORTHO05D008055 5.1e-20 101.3 100 55.0
PGR119G2211 Punica granatum HOM05D006279 ORTHO05D008055 5.1e-20 101.3 86 57.0
CSS0005410 Camellia sinensis var. sinensis HOM05D006279 ORTHO05D008055 6.6e-20 100.9 105 48.6
Actinidia20026 Actinidia chinensis HOM05D006279 ORTHO05D008055 8.7e-20 100.5 78 59.0
Actinidia30262 Actinidia chinensis HOM05D006279 ORTHO05D008055 8.7e-20 100.5 86 58.1
Sabra05G0055000 Salix brachista HOM05D006279 ORTHO05D008055 8.7e-20 100.5 112 48.2
Glyma.08G354200 Glycine max HOM05D006279 ORTHO05D008055 1.1e-19 100.1 102 50.0
Phvul.008G125700 Phaseolus vulgaris HOM05D006279 ORTHO05D008055 1.5e-19 99.8 82 61.0
Atru.chr9.833 Acer truncatum HOM05D000003 ORTHO05D000126 1.9e-19 99.4 73 63.0
COL.COLO4_11288 Corchorus olitorius HOM05D006279 ORTHO05D008055 1.9e-19 99.4 109 47.7
CANSAT64G0511 Cannabis sativa HOM05D006279 ORTHO05D008055 2.5e-19 99.0 99 48.5
AUR62006855 Chenopodium quinoa HOM05D006279 ORTHO05D008055 2.5e-19 99.0 86 52.3
Ciclev10003637m.g Citrus clementina HOM05D006279 ORTHO05D008055 2.5e-19 99.0 117 46.2
Oeu006489.1 Olea europaea HOM05D006279 ORTHO05D008055 2.5e-19 99.0 105 48.6
TWI79G1313 Tripterygium wilfordii HOM05D006279 ORTHO05D008055 2.5e-19 99.0 104 50.0
Sopen06g019660 Solanum pennellii HOM05D006279 ORTHO05D008055 3.3e-19 98.6 83 56.6
MSTRG.20541 Avicennia marina HOM05D006279 ORTHO05D008055 4.3e-19 98.2 115 46.1
CiPaw.14G026200 Carya illinoinensis HOM05D006279 ORTHO05D008055 5.6e-19 97.8 105 49.5
AUR62000510 Chenopodium quinoa HOM05D006279 ORTHO05D008055 5.6e-19 97.8 86 51.2
arahy.Tifrunner.gnm1.ann1.YQI87S Arachis hypogaea HOM05D006279 ORTHO05D008055 7.3e-19 97.4 105 47.6
CANSAT78G0480 Cannabis sativa HOM05D006279 ORTHO05D008055 7.3e-19 97.4 86 58.1
Lj1g0019467 Lotus japonicus HOM05D006279 ORTHO05D008055 7.3e-19 97.4 102 50.0
arahy.Tifrunner.gnm1.ann1.96G0FW Arachis hypogaea HOM05D006279 ORTHO05D008055 9.6e-19 97.1 105 48.6
Manes.01G181300 Manihot esculenta HOM05D006279 ORTHO05D008055 9.6e-19 97.1 106 47.2
Sabra07G0084300 Salix brachista HOM05D006279 ORTHO05D008055 9.6e-19 97.1 105 46.7
Glyma.18G170600 Glycine max HOM05D006279 ORTHO05D008055 1.3e-18 96.7 82 58.5
Rhsim10G0172600 Rhododendron simsii HOM05D006279 ORTHO05D008055 1.3e-18 96.7 77 62.3
Solyc06g054590.3 Solanum lycopersicum HOM05D006279 ORTHO05D008055 1.3e-18 96.7 83 56.6
COL.COLO4_13057 Corchorus olitorius HOM05D006279 ORTHO05D008055 1.6e-18 96.3 106 47.2
Medtr1g098510 Medicago truncatula HOM05D006279 ORTHO05D008055 1.6e-18 96.3 102 49.0
Potri.007G102600 Populus trichocarpa HOM05D006279 ORTHO05D008055 1.6e-18 96.3 105 45.7
VMungo1383G1366 Vigna mungo HOM05D006279 ORTHO05D008055 1.6e-18 96.3 82 57.3
Lsat_1_v5_gn_5_86080 Lactuca sativa HOM05D006279 ORTHO05D008055 2.1e-18 95.9 114 47.4
Peaxi162Scf00386g00058 Petunia axillaris HOM05D006279 ORTHO05D008055 3.6e-18 95.1 108 46.3
PGSC0003DMG400030782 Solanum tuberosum HOM05D006279 ORTHO05D008055 3.6e-18 95.1 83 55.4
MELO3C023226.2 Cucumis melo HOM05D006279 ORTHO05D008055 4.8e-18 94.7 89 50.6
DCAR_026025 Daucus carota HOM05D006279 ORTHO05D008055 4.8e-18 94.7 78 56.4
MBI06_g37673_MAGBIO Magnolia biondii HOM05D006279 ORTHO05D008055 4.8e-18 94.7 61 65.6
MBI06_g46723_MAGBIO Magnolia biondii HOM05D006279 ORTHO05D008055 4.8e-18 94.7 61 65.6
CAN.G1592.9 Capsicum annuum HOM05D006279 ORTHO05D008055 6.2e-18 94.4 83 54.2
Eucgr.L03476 Eucalyptus grandis HOM05D006279 ORTHO05D008055 6.2e-18 94.4 78 60.3
HanXRQChr10g0308251 Helianthus annuus HOM05D006279 ORTHO05D008055 6.2e-18 94.4 113 46.0
Migut.B01200 Erythranthe guttata HOM05D006279 ORTHO05D008055 1.1e-17 93.6 82 57.3
Eucgr.I00134 Eucalyptus grandis HOM05D006279 ORTHO05D008055 1.4e-17 93.2 78 57.7
PGSC0003DMG400022672 Solanum tuberosum HOM05D006279 ORTHO05D008055 1.4e-17 93.2 82 56.1
arahy.Tifrunner.gnm1.ann1.BRZ89T Arachis hypogaea HOM05D006279 ORTHO05D008055 1.8e-17 92.8 110 45.5
Peaxi162Scf00033g00134 Petunia axillaris HOM05D006279 ORTHO05D008055 1.8e-17 92.8 83 53.0
Nitab4.5_0001688g0060 Nicotiana tabacum HOM05D006279 ORTHO05D008055 4.0e-17 91.7 82 53.7
Nitab4.5_0000644g0080 Nicotiana tabacum HOM05D006279 ORTHO05D008055 6.9e-17 90.9 105 43.8
Aqoxy2G01154 Aquilegia oxysepala HOM05D006279 ORTHO05D008055 9.0e-17 90.5 80 53.8
Nitab4.5_0000829g0220 Nicotiana tabacum HOM05D006279 ORTHO05D008055 9.0e-17 90.5 105 43.8
Nitab4.5_0010800g0010 Nicotiana tabacum HOM05D006279 ORTHO05D008055 1.2e-16 90.1 82 52.4
ATR0824G232 Amborella trichopoda HOM05D006279 ORTHO05D008055 2.0e-16 89.4 101 47.5
Eucgr.I00143 Eucalyptus grandis HOM05D006279 ORTHO05D008055 7.6e-16 87.4 71 59.2
Lalb_Chr01g0022321 Lupinus albus HOM05D006279 ORTHO05D008055 7.6e-16 87.4 100 45.0
Sed0009157 Sechium edule HOM05D006279 ORTHO05D008055 1.3e-15 86.7 86 50.0
CAN.G256.17 Capsicum annuum HOM05D006279 ORTHO05D008055 2.9e-15 85.5 61 59.0
GSVIVG01023542001 Vitis vinifera HOM05D006279 ORTHO05D008055 3.8e-15 85.1 99 46.5
Os01g0861000 Oryza sativa ssp. japonica HOM05D006279 ORTHO05D008055 2.4e-14 82.4 62 59.7
SHI36067 Sapria himalayana HOM05D006279 ORTHO05D008055 1.2e-13 80.1 87 47.1
HPP92_013811 Vanilla planifolia HOM05D006279 ORTHO05D008055 2.1e-13 79.3 107 42.1
arahy.Tifrunner.gnm1.ann1.BUL9CE Arachis hypogaea HOM05D006279 ORTHO05D008055 6.0e-13 77.8 75 52.0
COL.COLO4_36340 Corchorus olitorius HOM05D006279 ORTHO05D008055 6.0e-13 77.8 72 48.6
SEGI_20234 Sequoiadendron giganteum HOM05D006279 ORTHO05D008055 1.6e-10 69.7 61 47.5
Pp3c8_7150 Physcomitrium patens HOM05D006279 ORTHO05D008055 1.2e-08 63.5 66 42.4
Sopen01g029410 Solanum pennellii HOM05D006279 ORTHO05D008055 1.2e-08 63.5 37 67.6
Mapoly0027s0076 Marchantia polymorpha HOM05D006279 ORTHO05D008055 2.2e-07 59.3 79 36.7


User provided reference genes

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