Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG3G170 Aethionema arabicum HOM05D006491 ORTHO05D008412 4.2e-237 824.3 417 100.0
Carub.0007s1278 Capsella rubella HOM05D006491 ORTHO05D008412 4.0e-155 552.0 362 77.6
Thhalv10025588m.g Eutrema salsugineum HOM05D006491 ORTHO05D008412 6.4e-153 544.7 350 78.6
AL7G24610 Arabidopsis lyrata HOM05D006491 ORTHO05D008412 1.2e-151 540.4 350 77.4
CARHR235700 Cardamine hirsuta HOM05D006491 ORTHO05D008412 5.9e-151 538.1 350 78.0
Sp7g25960 Schrenkiella parvula HOM05D006491 ORTHO05D008412 2.5e-149 532.7 345 76.8
A08p20250 Brassica napus HOM05D006491 ORTHO05D008412 3.3e-149 532.3 341 79.2
BraA08t33984Z Brassica rapa HOM05D006491 ORTHO05D008412 4.7e-148 528.5 341 78.9
C08p10580 Brassica napus HOM05D006491 ORTHO05D008412 4.4e-146 521.9 341 78.3
BcaC07g38308 Brassica carinata HOM05D006491 ORTHO05D008412 1.7e-145 520.0 341 78.0
BolC8t48733H Brassica oleracea HOM05D006491 ORTHO05D008412 4.9e-145 518.5 341 77.7
BcaB03g12553 Brassica carinata HOM05D006491 ORTHO05D008412 7.8e-135 484.6 308 79.9
THA.LOC104817809 Tarenaya hassleriana HOM05D006491 ORTHO05D008412 2.3e-131 473.0 313 76.7
Dinv41291 Davidia involucrata HOM05D006491 ORTHO05D008412 4.0e-123 445.7 376 59.3
AT4G28020 Arabidopsis thaliana HOM05D006491 ORTHO05D008412 4.6e-119 432.2 260 82.3
Rhsim03G0262200 Rhododendron simsii HOM05D006491 ORTHO05D008412 2.3e-118 429.9 374 58.6
Actinidia17330 Actinidia chinensis HOM05D006491 ORTHO05D008412 1.5e-117 427.2 388 57.7
Duzib150G0568 Durio zibethinus HOM05D006491 ORTHO05D008412 1.9e-117 426.8 370 58.9
Manes.14G150100 Manihot esculenta HOM05D006491 ORTHO05D008412 9.6e-117 424.5 376 58.5
Potri.018G096900 Populus trichocarpa HOM05D006491 ORTHO05D008412 9.6e-117 424.5 366 60.9
CSS0049223 Camellia sinensis var. sinensis HOM05D006491 ORTHO05D008412 2.1e-116 423.3 378 57.7
Aqoxy7G03183 Aquilegia oxysepala HOM05D006491 ORTHO05D008412 6.2e-116 421.8 371 58.2
Cpa.g.sc450.5 Carica papaya HOM05D006491 ORTHO05D008412 1.4e-115 420.6 406 54.7
COL.COLO4_16079 Corchorus olitorius HOM05D006491 ORTHO05D008412 1.8e-115 420.2 384 57.6
GSVIVG01029103001 Vitis vinifera HOM05D006491 ORTHO05D008412 1.8e-115 420.2 366 59.8
Gohir.D08G096700 Gossypium hirsutum HOM05D006491 ORTHO05D008412 2.4e-115 419.9 359 60.2
Gorai.004G103700 Gossypium raimondii HOM05D006491 ORTHO05D008412 2.4e-115 419.9 359 60.2
Sabra18G0084000 Salix brachista HOM05D006491 ORTHO05D008412 2.4e-115 419.9 366 60.7
Lalb_Chr13g0300441 Lupinus albus HOM05D006491 ORTHO05D008412 9.0e-115 417.9 364 56.9
MSTRG.10725 Avicennia marina HOM05D006491 ORTHO05D008412 1.2e-114 417.5 381 57.0
TWI63G0546 Tripterygium wilfordii HOM05D006491 ORTHO05D008412 1.5e-114 417.2 366 57.9
CiPaw.07G187800 Carya illinoinensis HOM05D006491 ORTHO05D008412 3.4e-114 416.0 365 58.6
arahy.Tifrunner.gnm1.ann1.E3AGAX Arachis hypogaea HOM05D006491 ORTHO05D008412 4.5e-114 415.6 366 57.9
QL02p096111 Quercus lobata HOM05D006491 ORTHO05D008412 4.5e-114 415.6 351 60.1
Gohir.A08G070300 Gossypium hirsutum HOM05D006491 ORTHO05D008412 2.2e-113 413.3 359 59.9
VMungo1215G2097 Vigna mungo HOM05D006491 ORTHO05D008412 2.2e-113 413.3 348 60.1
arahy.Tifrunner.gnm1.ann1.1P8XK5 Arachis hypogaea HOM05D006491 ORTHO05D008412 2.9e-113 412.9 366 57.1
Phvul.003G149900 Phaseolus vulgaris HOM05D006491 ORTHO05D008412 2.9e-113 412.9 355 59.4
Lj4g0007651 Lotus japonicus HOM05D006491 ORTHO05D008412 4.9e-113 412.1 368 56.8
PGR142G3664 Punica granatum HOM05D006491 ORTHO05D008412 6.4e-113 411.8 375 58.1
Haze_22140 Corylus avellana HOM05D006491 ORTHO05D008412 1.1e-112 411.0 361 57.9
MD13G1262500 Malus domestica HOM05D006491 ORTHO05D008412 1.1e-112 411.0 373 56.0
Medtr4g129150 Medicago truncatula HOM05D006491 ORTHO05D008412 1.4e-112 410.6 367 57.8
Prupe.1G095000 Prunus persica HOM05D006491 ORTHO05D008412 5.4e-112 408.7 362 55.2
HanXRQChr05g0136551 Helianthus annuus HOM05D006491 ORTHO05D008412 7.1e-112 408.3 344 60.8
TAR383G0527 Trochodendron aralioides HOM05D006491 ORTHO05D008412 9.3e-112 407.9 361 57.1
Ciclev10008637m.g Citrus clementina HOM05D006491 ORTHO05D008412 1.2e-111 407.5 366 57.9
Nn2g14424 Nelumbo nucifera HOM05D006491 ORTHO05D008412 1.2e-111 407.5 375 57.1
ClCG06G012970 Citrullus lanatus HOM05D006491 ORTHO05D008412 2.1e-111 406.8 364 56.3
Lsat_1_v5_gn_8_65441 Lactuca sativa HOM05D006491 ORTHO05D008412 7.9e-111 404.8 353 58.9
vmacro06036 Vaccinium macrocarpon HOM05D006491 ORTHO05D008412 5.1e-110 402.1 395 54.2
CsaV3_1G029540 Cucumis sativus L. HOM05D006491 ORTHO05D008412 8.7e-110 401.4 359 55.2
TPR.G5304 Trifolium pratense HOM05D006491 ORTHO05D008412 8.7e-110 401.4 375 55.2
MBI14_g24284_MAGBIO Magnolia biondii HOM05D006491 ORTHO05D008412 1.1e-109 401.0 375 54.4
FAN12G3371 Fragaria x ananassa HOM05D006491 ORTHO05D008412 7.4e-109 398.3 359 56.0
ATR0580G190 Amborella trichopoda HOM05D006491 ORTHO05D008412 1.3e-108 397.5 360 56.9
EL10Ac8g18256 Beta vulgaris HOM05D006491 ORTHO05D008412 1.3e-108 397.5 362 56.6
FAN22G1104 Fragaria x ananassa HOM05D006491 ORTHO05D008412 1.3e-108 397.5 359 55.4
Sc14g0001140 Simmondsia chinensis HOM05D006491 ORTHO05D008412 4.8e-108 395.6 329 59.0
Ca_21191_v3 Cicer arietinum L. HOM05D006491 ORTHO05D008412 6.2e-108 395.2 376 54.8
MELO3C017512.2 Cucumis melo HOM05D006491 ORTHO05D008412 8.1e-108 394.8 364 54.7
Ah.09g229650 Amaranthus hybridus HOM05D006491 ORTHO05D008412 6.9e-107 391.7 359 56.5
Oeu043515.2 Olea europaea HOM05D006491 ORTHO05D008412 1.2e-106 391.0 424 50.5
Psat4g010880 Pisum sativum HOM05D006491 ORTHO05D008412 1.2e-106 391.0 375 53.6
RcHm_v2.0_Chr4g0404161 Rosa chinensis HOM05D006491 ORTHO05D008412 2.0e-106 390.2 344 57.3
CANSAT11G0137 Cannabis sativa HOM05D006491 ORTHO05D008412 2.6e-106 389.8 379 53.3
Nitab4.5_0000593g0170 Nicotiana tabacum HOM05D006491 ORTHO05D008412 3.4e-106 389.4 364 56.6
ECA236G3989 Erigeron canadensis HOM05D006491 ORTHO05D008412 9.9e-106 387.9 347 57.9
Nitab4.5_0003408g0120 Nicotiana tabacum HOM05D006491 ORTHO05D008412 1.3e-105 387.5 364 56.3
Atru.chr7.558 Acer truncatum HOM05D006491 ORTHO05D008412 2.2e-105 386.7 312 64.7
PGSC0003DMG401027355 Solanum tuberosum HOM05D006491 ORTHO05D008412 1.9e-104 383.6 354 57.3
Sopen11g003610 Solanum pennellii HOM05D006491 ORTHO05D008412 4.2e-104 382.5 354 57.1
Solyc11g007750.3 Solanum lycopersicum HOM05D006491 ORTHO05D008412 9.3e-104 381.3 354 57.1
Thecc.09G163600 Theobroma cacao HOM05D006491 ORTHO05D008412 2.7e-103 379.8 369 54.5
CAN.G135.50 Capsicum annuum HOM05D006491 ORTHO05D008412 6.0e-103 378.6 350 56.9
Os09g0428900 Oryza sativa ssp. japonica HOM05D006491 ORTHO05D008412 6.7e-102 375.2 360 53.1
unitig_62.g23494 Utricularia gibba HOM05D006491 ORTHO05D008412 4.3e-101 372.5 341 56.6
Glyma.17G067500 Glycine max HOM05D006491 ORTHO05D008412 8.2e-100 368.2 369 52.8
Zm00001eb313540 Zea mays HOM05D006491 ORTHO05D008412 8.2e-100 368.2 340 56.2
Migut.K00266 Erythranthe guttata HOM05D006491 ORTHO05D008412 1.8e-99 367.1 375 51.7
Actinidia17333 Actinidia chinensis HOM05D006491 ORTHO05D008412 3.4e-98 362.8 308 59.4
Cfa013536 Carpinus fangiana HOM05D006491 ORTHO05D008412 3.8e-97 359.4 283 63.3
PSO782G2884 Papaver somniferum HOM05D006491 ORTHO05D008412 6.5e-97 358.6 333 55.0
PSO063G6711 Papaver somniferum HOM05D006491 ORTHO05D008412 2.5e-96 356.7 325 55.4
Cc06_g13780 Coffea canephora HOM05D006491 ORTHO05D008412 8.7e-94 348.2 393 49.6
Eucgr.C00197 Eucalyptus grandis HOM05D006491 ORTHO05D008412 9.7e-93 344.7 307 58.0
Glyma.13G093000 Glycine max HOM05D006491 ORTHO05D008412 6.9e-91 338.6 262 62.6
Hund26385 Selenicereus undatus HOM05D006491 ORTHO05D008412 2.6e-90 336.7 354 52.8
Peaxi162Scf00113g00085 Petunia axillaris HOM05D006491 ORTHO05D008412 1.2e-87 327.8 272 60.7
FvH4_4g08360 Fragaria vesca HOM05D006491 ORTHO05D008412 1.9e-85 320.5 231 64.9
AUR62040289 Chenopodium quinoa HOM05D006491 ORTHO05D008412 2.5e-85 320.1 333 50.8
DCAR_017948 Daucus carota HOM05D006491 ORTHO05D008412 1.3e-84 317.8 233 63.5
AUR62039980 Chenopodium quinoa HOM05D006491 ORTHO05D008412 2.8e-84 316.6 333 50.5
FAN07G0899 Fragaria x ananassa HOM05D006491 ORTHO05D008412 1.1e-83 314.7 359 47.9
AagrBONN_evm.TU.Sc2ySwM_344.1093 Anthoceros agrestis HOM05D006491 ORTHO05D008412 3.1e-83 313.2 288 54.2
Pp3c9_21480 Physcomitrium patens HOM05D006491 ORTHO05D008412 6.9e-83 312.0 397 42.8
SMO358G0273 Selaginella moellendorffii HOM05D006491 ORTHO05D008412 6.9e-83 312.0 354 48.0
Sed0015960 Sechium edule HOM05D006491 ORTHO05D008412 1.5e-82 310.8 271 58.3
Actinidia14076 Actinidia chinensis HOM05D006491 ORTHO05D008412 1.0e-81 308.1 230 68.7
Actinidia25168 Actinidia chinensis HOM05D006491 ORTHO05D008412 6.1e-79 298.9 208 69.2
Hma1.2p1_0921F.1_g236670 Hydrangea macrophylla HOM05D006491 ORTHO05D008412 1.4e-78 297.7 305 52.1
Mapoly0045s0079 Marchantia polymorpha HOM05D006491 ORTHO05D008412 6.3e-76 288.9 323 47.4
Lj9A730G48 Lonicera japonica HOM05D006491 ORTHO05D008412 3.2e-72 276.6 179 74.9
CDE05G0295 Ceratophyllum demersum HOM05D006491 ORTHO05D008412 1.1e-67 261.5 281 47.7
SGA_v2.0_scaffold242G44263 Striga asiatica HOM05D006491 ORTHO05D008412 5.9e-66 255.8 297 49.5
Peaxi162Scf00532g00051 Petunia axillaris HOM05D006491 ORTHO05D008412 6.1e-63 245.7 333 43.2
Cre14.g613450 Chlamydomonas reinhardtii HOM05D006491 ORTHO05D008412 3.0e-54 216.9 225 50.7
MCO01G751 Micromonas commoda HOM05D006491 ORTHO05D008412 3.8e-49 199.9 346 37.0
arahy.Tifrunner.gnm1.ann1.6S8GSB Arachis hypogaea HOM05D006491 ORTHO05D008412 1.8e-46 191.0 195 52.3
PRCOL_00001913 Prasinoderma coloniale HOM05D006491 ORTHO05D008412 4.0e-46 189.9 308 39.9
SEGI_13660 Sequoiadendron giganteum HOM05D006491 ORTHO05D008412 8.3e-44 182.2 146 59.6
MELO3C026731.2 Cucumis melo HOM05D006491 ORTHO05D008412 8.9e-38 162.2 140 58.6
MCO14G289 Micromonas commoda HOM05D006491 ORTHO05D008412 1.3e-36 158.3 160 53.1
SEGI_21199 Sequoiadendron giganteum HOM05D006491 ORTHO05D008412 1.3e-28 131.7 182 43.4
SGA_v2.0_scaffold242G44258 Striga asiatica HOM05D006491 ORTHO05D008412 7.3e-24 115.9 71 80.3
GSVIVG01029402001 Vitis vinifera HOM05D006491 ORTHO05D008412 4.6e-10 70.1 55 60.0
Hma1.2p1_1576F.1_g291650 Hydrangea macrophylla HOM05D006491 ORTHO05D008412 3.0e-09 67.4 48 62.5
Duzib168G0391 Durio zibethinus HOM05D006491 ORTHO05D008412 1.9e-08 64.7 103 36.9


User provided reference genes

Program Settings