Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG3G16830 Aethionema arabicum HOM05D006096 ORTHO05D007775 1.4e-226 789.3 408 100.0
AT5G10320 Arabidopsis thaliana HOM05D006096 ORTHO05D007775 6.6e-155 551.2 410 72.4
BcaC04g19312 Brassica carinata HOM05D006096 ORTHO05D007775 1.2e-151 540.4 408 69.6
BolC9t59480H Brassica oleracea HOM05D006096 ORTHO05D007775 2.6e-151 539.3 408 69.6
AL6G20820 Arabidopsis lyrata HOM05D006096 ORTHO05D007775 1.3e-150 537.0 411 69.8
BraA10t44776Z Brassica rapa HOM05D006096 ORTHO05D007775 1.7e-150 536.6 411 68.9
BcaB08g37116 Brassica carinata HOM05D006096 ORTHO05D007775 2.1e-148 529.6 418 68.2
C09p67070 Brassica napus HOM05D006096 ORTHO05D007775 1.0e-147 527.3 410 68.3
A10p27260 Brassica napus HOM05D006096 ORTHO05D007775 1.5e-146 523.5 414 67.6
Thhalv10013818m.g Eutrema salsugineum HOM05D006096 ORTHO05D007775 1.1e-144 517.3 415 67.5
BcaC04g19315 Brassica carinata HOM05D006096 ORTHO05D007775 3.2e-117 426.0 309 70.9
Cpa.g.sc55.89 Carica papaya HOM05D006096 ORTHO05D007775 1.6e-116 423.7 416 57.7
Sp6g33110 Schrenkiella parvula HOM05D006096 ORTHO05D007775 6.7e-115 418.3 322 70.2
Gohir.A10G085100 Gossypium hirsutum HOM05D006096 ORTHO05D007775 1.1e-112 411.0 416 53.6
Gorai.011G113400 Gossypium raimondii HOM05D006096 ORTHO05D007775 5.3e-112 408.7 416 53.4
Duzib187G1253 Durio zibethinus HOM05D006096 ORTHO05D007775 7.0e-112 408.3 412 54.1
Glyma.18G015800 Glycine max HOM05D006096 ORTHO05D007775 2.6e-111 406.4 413 54.0
Atru.chr3.1373 Acer truncatum HOM05D006096 ORTHO05D007775 6.5e-110 401.7 417 55.2
Medtr3g087010 Medicago truncatula HOM05D006096 ORTHO05D007775 2.5e-109 399.8 405 53.6
Potri.005G073600 Populus trichocarpa HOM05D006096 ORTHO05D007775 3.2e-109 399.4 414 55.8
MD01G1033500 Malus domestica HOM05D006096 ORTHO05D007775 9.4e-109 397.9 415 53.3
Phvul.001G253200 Phaseolus vulgaris HOM05D006096 ORTHO05D007775 1.6e-108 397.1 419 53.5
vmacro18587 Vaccinium macrocarpon HOM05D006096 ORTHO05D007775 4.7e-108 395.6 413 54.0
Sopen11g004830 Solanum pennellii HOM05D006096 ORTHO05D007775 6.1e-108 395.2 416 52.9
PGSC0003DMG400016160 Solanum tuberosum HOM05D006096 ORTHO05D007775 6.1e-108 395.2 416 52.9
Aqoxy6G00746 Aquilegia oxysepala HOM05D006096 ORTHO05D007775 8.0e-108 394.8 413 52.3
Psat5g090600 Pisum sativum HOM05D006096 ORTHO05D007775 8.0e-108 394.8 408 52.0
FvH4_1g20510 Fragaria vesca HOM05D006096 ORTHO05D007775 1.8e-107 393.7 417 53.2
Prupe.6G191000 Prunus persica HOM05D006096 ORTHO05D007775 1.8e-107 393.7 416 53.6
RcHm_v2.0_Chr2g0112761 Rosa chinensis HOM05D006096 ORTHO05D007775 1.8e-107 393.7 424 52.8
TWI53G1189 Tripterygium wilfordii HOM05D006096 ORTHO05D007775 1.8e-107 393.7 416 53.8
Cc07_g14840 Coffea canephora HOM05D006096 ORTHO05D007775 2.3e-107 393.3 426 53.1
TPR.G15994 Trifolium pratense HOM05D006096 ORTHO05D007775 3.0e-107 392.9 405 52.6
Sc16g0000180 Simmondsia chinensis HOM05D006096 ORTHO05D007775 1.5e-106 390.6 414 53.6
Eucgr.H04751 Eucalyptus grandis HOM05D006096 ORTHO05D007775 2.0e-106 390.2 412 52.7
CARHR202970 Cardamine hirsuta HOM05D006096 ORTHO05D007775 2.6e-106 389.8 342 62.6
Glyma.11G241200 Glycine max HOM05D006096 ORTHO05D007775 4.4e-106 389.0 415 51.6
arahy.Tifrunner.gnm1.ann1.DD3ZZY Arachis hypogaea HOM05D006096 ORTHO05D007775 5.7e-106 388.7 434 49.5
arahy.Tifrunner.gnm1.ann1.C4UPUA Arachis hypogaea HOM05D006096 ORTHO05D007775 9.7e-106 387.9 415 51.6
MBI02_g02177_MAGBIO Magnolia biondii HOM05D006096 ORTHO05D007775 1.3e-105 387.5 423 52.0
Nn1g05418 Nelumbo nucifera HOM05D006096 ORTHO05D007775 1.7e-105 387.1 422 52.1
CARHR202960 Cardamine hirsuta HOM05D006096 ORTHO05D007775 2.2e-105 386.7 300 65.3
Lj6g0005810 Lotus japonicus HOM05D006096 ORTHO05D007775 4.8e-105 385.6 420 52.6
VMungo1383G2853 Vigna mungo HOM05D006096 ORTHO05D007775 4.8e-105 385.6 413 51.6
Peaxi162Scf00381g01013 Petunia axillaris HOM05D006096 ORTHO05D007775 1.6e-103 380.6 416 50.7
Carub.0006s0879 Capsella rubella HOM05D006096 ORTHO05D007775 3.5e-103 379.4 290 70.0
COL.COLO4_27275 Corchorus olitorius HOM05D006096 ORTHO05D007775 2.9e-102 376.3 411 52.8
Lalb_Chr19g0127391 Lupinus albus HOM05D006096 ORTHO05D007775 1.9e-101 373.6 412 51.7
Sed0027583 Sechium edule HOM05D006096 ORTHO05D007775 3.2e-101 372.9 412 51.2
CSS0046442 Camellia sinensis var. sinensis HOM05D006096 ORTHO05D007775 5.5e-101 372.1 420 50.2
ATR0684G225 Amborella trichopoda HOM05D006096 ORTHO05D007775 3.6e-100 369.4 422 49.1
CANSAT01G2346 Cannabis sativa HOM05D006096 ORTHO05D007775 3.6e-100 369.4 466 47.6
PSO210G0897 Papaver somniferum HOM05D006096 ORTHO05D007775 3.6e-100 369.4 415 50.8
TAR625G1553 Trochodendron aralioides HOM05D006096 ORTHO05D007775 4.7e-100 369.0 371 55.8
EL10Ac6g15136 Beta vulgaris HOM05D006096 ORTHO05D007775 6.1e-100 368.6 441 48.5
Lsat_1_v5_gn_5_34320 Lactuca sativa HOM05D006096 ORTHO05D007775 1.2e-98 364.4 408 50.5
AUR62001986 Chenopodium quinoa HOM05D006096 ORTHO05D007775 4.4e-98 362.5 448 48.9
Actinidia28854 Actinidia chinensis HOM05D006096 ORTHO05D007775 1.2e-95 354.4 416 49.8
CAN.G905.37 Capsicum annuum HOM05D006096 ORTHO05D007775 1.2e-95 354.4 380 52.4
Hund13600 Selenicereus undatus HOM05D006096 ORTHO05D007775 5.9e-95 352.1 485 45.2
Os04g0451100 Oryza sativa ssp. japonica HOM05D006096 ORTHO05D007775 2.2e-94 350.1 417 49.9
FAN23G0863 Fragaria x ananassa HOM05D006096 ORTHO05D007775 4.7e-92 342.4 417 48.4
ClCG07G017370 Citrullus lanatus HOM05D006096 ORTHO05D007775 9.8e-90 334.7 534 39.9
Migut.H02345 Erythranthe guttata HOM05D006096 ORTHO05D007775 9.8e-90 334.7 403 50.6
Oeu033049.1 Olea europaea HOM05D006096 ORTHO05D007775 1.7e-89 334.0 377 50.9
Zm00001eb081250 Zea mays HOM05D006096 ORTHO05D007775 1.7e-89 334.0 288 59.4
CARHR202980 Cardamine hirsuta HOM05D006096 ORTHO05D007775 4.8e-89 332.4 251 71.7
QL06p048476 Quercus lobata HOM05D006096 ORTHO05D007775 1.4e-88 330.9 295 57.3
Sabra05G0060100 Salix brachista HOM05D006096 ORTHO05D007775 7.0e-88 328.6 403 48.6
ECA246G2908 Erigeron canadensis HOM05D006096 ORTHO05D007775 1.3e-86 324.3 434 44.7
Rhsim08G0012600 Rhododendron simsii HOM05D006096 ORTHO05D007775 7.5e-82 308.5 419 45.8
PSO447G0355 Papaver somniferum HOM05D006096 ORTHO05D007775 1.7e-81 307.4 417 45.3
SGA_v2.0_scaffold111G31503 Striga asiatica HOM05D006096 ORTHO05D007775 1.1e-80 304.7 412 45.1
HPP92_011214 Vanilla planifolia HOM05D006096 ORTHO05D007775 1.3e-78 297.7 419 44.9
Haze_24882 Corylus avellana HOM05D006096 ORTHO05D007775 1.5e-77 294.3 448 43.1
FAN19G2919 Fragaria x ananassa HOM05D006096 ORTHO05D007775 3.3e-77 293.1 408 45.6
Gohir.D10G103900 Gossypium hirsutum HOM05D006096 ORTHO05D007775 3.3e-77 293.1 316 50.9
Nitab4.5_0004570g0020 Nicotiana tabacum HOM05D006096 ORTHO05D007775 1.2e-76 291.2 296 54.4
Thecc.01G097900 Theobroma cacao HOM05D006096 ORTHO05D007775 1.2e-76 291.2 310 52.6
Dinv08841 Davidia involucrata HOM05D006096 ORTHO05D007775 3.4e-74 283.1 317 50.8
Solyc11g009060.2 Solanum lycopersicum HOM05D006096 ORTHO05D007775 9.8e-74 281.6 312 51.3
CsaV3_4G004600 Cucumis sativus L. HOM05D006096 ORTHO05D007775 1.3e-73 281.2 287 54.0
QL06p048506 Quercus lobata HOM05D006096 ORTHO05D007775 1.7e-73 280.8 330 50.6
Manes.13G095500 Manihot esculenta HOM05D006096 ORTHO05D007775 3.7e-73 279.6 322 52.2
CiPaw.03G143900 Carya illinoinensis HOM05D006096 ORTHO05D007775 1.9e-72 277.3 332 48.2
Cfa002624 Carpinus fangiana HOM05D006096 ORTHO05D007775 3.2e-72 276.6 315 50.8
unitig_899.g14550 Utricularia gibba HOM05D006096 ORTHO05D007775 2.0e-71 273.9 447 40.3
Ciclev10026196m.g Citrus clementina HOM05D006096 ORTHO05D007775 2.7e-71 273.5 313 51.4
SalBow3G4176 Salvia bowleyana HOM05D006096 ORTHO05D007775 5.0e-70 269.2 430 42.8
CsaV3_UNG122970 Cucumis sativus L. HOM05D006096 ORTHO05D007775 2.5e-69 266.9 311 49.5
Pp3c26_3770 Physcomitrium patens HOM05D006096 ORTHO05D007775 2.2e-65 253.8 437 38.2
HanXRQChr02g0032011 Helianthus annuus HOM05D006096 ORTHO05D007775 2.4e-64 250.4 305 47.9
AUR62003818 Chenopodium quinoa HOM05D006096 ORTHO05D007775 1.6e-63 247.7 274 51.8
MELO3C017606.2 Cucumis melo HOM05D006096 ORTHO05D007775 7.8e-63 245.4 582 32.3
DCAR_014211 Daucus carota HOM05D006096 ORTHO05D007775 3.9e-62 243.0 291 49.1
Haze_24873 Corylus avellana HOM05D006096 ORTHO05D007775 2.3e-59 233.8 431 39.7
Mapoly0077s0016 Marchantia polymorpha HOM05D006096 ORTHO05D007775 5.2e-59 232.6 469 35.4
Pp3c3_14090 Physcomitrium patens HOM05D006096 ORTHO05D007775 1.4e-56 224.6 409 38.4
CBR_g26374 Chara braunii HOM05D006096 ORTHO05D007775 4.1e-56 223.0 321 41.4
FAN28G1526 Fragaria x ananassa HOM05D006096 ORTHO05D007775 1.9e-53 214.2 432 37.3
Ca_16518_v3 Cicer arietinum L. HOM05D006096 ORTHO05D007775 1.5e-50 204.5 315 41.0
AagrBONN_evm.TU.Sc2ySwM_344.1220 Anthoceros agrestis HOM05D006096 ORTHO05D007775 1.7e-49 201.1 307 42.7
CsaV3_UNG160190 Cucumis sativus L. HOM05D006096 ORTHO05D007775 4.9e-49 199.5 163 61.3
CBR_g53530 Chara braunii HOM05D006096 ORTHO05D007775 4.2e-48 196.4 267 41.6
SMO301G0024 Selaginella moellendorffii HOM05D006096 ORTHO05D007775 7.1e-48 195.7 188 52.7
Nitab4.5_0000743g0130 Nicotiana tabacum HOM05D006096 ORTHO05D007775 6.6e-46 189.1 406 33.5
HanXRQChr15g0477621 Helianthus annuus HOM05D006096 ORTHO05D007775 7.3e-45 185.7 285 39.6
CsaV3_UNG223570 Cucumis sativus L. HOM05D006096 ORTHO05D007775 1.8e-35 154.5 240 39.6
CDE06G0254 Ceratophyllum demersum HOM05D006096 ORTHO05D007775 1.7e-33 147.9 376 31.9
MSTRG.23356 Avicennia marina HOM05D006096 ORTHO05D007775 3.5e-31 140.2 291 37.1
Cre17.g719050 Chlamydomonas reinhardtii HOM05D006096 ORTHO05D007775 5.6e-29 132.9 296 32.8
QL06p048511 Quercus lobata HOM05D006096 ORTHO05D007775 8.1e-28 129.0 89 68.5
GSVIVG01006632001 Vitis vinifera HOM05D006096 ORTHO05D007775 5.3e-27 126.3 92 64.1
BcaB02g08416 Brassica carinata HOM05D006096 ORTHO05D007775 4.5e-26 123.2 79 74.7
Carub.0006s0878 Capsella rubella HOM05D006096 ORTHO05D007775 4.5e-26 123.2 93 69.9
Gohir.D10G103800 Gossypium hirsutum HOM05D006096 ORTHO05D007775 1.8e-22 111.3 80 65.0
Aa31LG7G15400 Aethionema arabicum HOM05D006096 ORTHO05D009377 5.3e-19 99.8 93 66.7
SEGI_01830 Sequoiadendron giganteum HOM05D006096 ORTHO05D007775 1.5e-18 98.2 115 42.6
HanXRQChr02g0032001 Helianthus annuus HOM05D006096 ORTHO05D007775 5.5e-16 89.7 72 59.7
Ah.02g123840 Amaranthus hybridus HOM05D006096 ORTHO05D007775 4.6e-15 86.7 59 71.2
SEGI_02986 Sequoiadendron giganteum HOM05D006096 ORTHO05D007775 1.3e-12 78.6 58 58.6
Cc03_g11790 Coffea canephora HOM05D006096 ORTHO05D007775 8.2e-12 75.9 86 48.8
Cc08_g12120 Coffea canephora HOM05D005131 ORTHO05D003188 2.0e-10 71.2 47 68.1
Sp1g28000 Schrenkiella parvula HOM05D006096 ORTHO05D007775 1.3e-09 68.6 102 49.0
Nitab4.5_0004570g0030 Nicotiana tabacum HOM05D006096 ORTHO05D007775 6.5e-09 66.2 73 46.6
Actinidia28243 Actinidia chinensis HOM05D006096 ORTHO05D009823 8.5e-09 65.9 98 41.8
CsaV3_UNG124970 Cucumis sativus L. HOM05D006096 ORTHO05D007775 3.2e-08 63.9 67 46.3
RcHm_v2.0_Chr4g0406191 Rosa chinensis HOM05D006096 ORTHO05D007775 4.2e-08 63.5 61 59.0
CsaV3_UNG160180 Cucumis sativus L. HOM05D006096 ORTHO05D007775 7.9e-07 59.3 99 37.4


User provided reference genes

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