Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG3G16490 Aethionema arabicum HOM05D007029 ORTHO05D008258 4.4e-101 371.3 189 100.0
AL6G21140 Arabidopsis lyrata HOM05D007029 ORTHO05D008258 1.2e-87 326.6 189 86.2
AT5G10620 Arabidopsis thaliana HOM05D007029 ORTHO05D008258 4.0e-86 321.6 189 85.7
Sp6g32830 Schrenkiella parvula HOM05D007029 ORTHO05D008258 2.0e-85 319.3 178 88.8
CARHR202690 Cardamine hirsuta HOM05D007029 ORTHO05D008258 1.3e-84 316.6 189 83.6
BcaB08g37096 Brassica carinata HOM05D007029 ORTHO05D008258 1.7e-84 316.2 178 86.5
Thhalv10014744m.g Eutrema salsugineum HOM05D007029 ORTHO05D008258 4.8e-84 314.7 178 87.1
BolC9t59441H Brassica oleracea HOM05D007029 ORTHO05D008258 2.7e-82 308.9 189 81.0
C09p66200 Brassica napus HOM05D007029 ORTHO05D008258 1.0e-81 307.0 189 80.4
BolC9t59447H Brassica oleracea HOM05D007029 ORTHO05D008258 1.7e-81 306.2 189 79.9
THA.LOC104799006 Tarenaya hassleriana HOM05D007029 ORTHO05D008258 4.0e-78 295.0 185 79.5
BraA10t44748Z Brassica rapa HOM05D007029 ORTHO05D008258 4.4e-77 291.6 191 75.9
A10p26970 Brassica napus HOM05D007029 ORTHO05D008258 2.5e-72 275.8 191 72.8
C09p66570 Brassica napus HOM05D007029 ORTHO05D008258 1.2e-71 273.5 158 84.8
C09p66410 Brassica napus HOM05D007029 ORTHO05D008258 1.0e-70 270.4 158 83.5
Carub.0006s0910 Capsella rubella HOM05D007029 ORTHO05D008258 1.0e-70 270.4 174 81.6
Potri.006G278500 Populus trichocarpa HOM05D007029 ORTHO05D008258 1.2e-69 266.9 180 73.3
Sabra06G0216100 Salix brachista HOM05D007029 ORTHO05D008258 2.6e-69 265.8 176 73.9
Duzib168G0066 Durio zibethinus HOM05D007029 ORTHO05D008258 9.8e-69 263.8 170 74.1
Gorai.010G123900 Gossypium raimondii HOM05D007029 ORTHO05D008258 2.2e-68 262.7 176 72.7
PSO144G0063 Papaver somniferum HOM05D007029 ORTHO05D008258 2.4e-67 259.2 177 70.1
TAR626G0900 Trochodendron aralioides HOM05D007029 ORTHO05D008258 2.4e-67 259.2 190 69.5
Phvul.001G057900 Phaseolus vulgaris HOM05D007029 ORTHO05D008258 7.0e-67 257.7 183 69.9
MELO3C003643.2 Cucumis melo HOM05D007029 ORTHO05D008258 1.6e-66 256.5 179 70.9
CSS0017002 Camellia sinensis var. sinensis HOM05D007029 ORTHO05D008258 7.8e-66 254.2 189 66.7
CSS0043998 Camellia sinensis var. sinensis HOM05D007029 ORTHO05D008258 7.8e-66 254.2 189 66.7
Manes.03G086800 Manihot esculenta HOM05D007029 ORTHO05D008258 1.7e-65 253.1 191 67.0
Thecc.09G005000 Theobroma cacao HOM05D007029 ORTHO05D008258 3.9e-65 251.9 189 64.6
Lalb_Chr24g0402421 Lupinus albus HOM05D007029 ORTHO05D008258 5.0e-65 251.5 169 69.8
Sc09g0007900 Simmondsia chinensis HOM05D007029 ORTHO05D008258 5.0e-65 251.5 182 65.4
Aqoxy7G02769 Aquilegia oxysepala HOM05D007029 ORTHO05D008258 6.6e-65 251.1 183 65.6
MD15G1110100 Malus domestica HOM05D007029 ORTHO05D008258 6.6e-65 251.1 189 66.1
Prupe.1G462300 Prunus persica HOM05D007029 ORTHO05D008258 8.6e-65 250.8 170 70.0
Cfa013252 Carpinus fangiana HOM05D007029 ORTHO05D008258 1.1e-64 250.4 166 72.9
Glyma.14G132800 Glycine max HOM05D007029 ORTHO05D008258 1.9e-64 249.6 181 68.0
Sc09g0007640 Simmondsia chinensis HOM05D007029 ORTHO05D008258 2.5e-64 249.2 182 64.8
Sed0023533 Sechium edule HOM05D007029 ORTHO05D008258 3.3e-64 248.8 169 71.6
Psat6g031920 Pisum sativum HOM05D007029 ORTHO05D008258 7.3e-64 247.7 172 67.4
PGR044G0703 Punica granatum HOM05D007029 ORTHO05D008258 9.5e-64 247.3 189 61.9
Cpa.g.sc10.205 Carica papaya HOM05D007029 ORTHO05D008258 1.6e-63 246.5 207 60.9
Lj5g0005194 Lotus japonicus HOM05D007029 ORTHO05D008258 8.0e-63 244.2 173 67.6
TPR.G12034 Trifolium pratense HOM05D007029 ORTHO05D008258 8.0e-63 244.2 182 66.5
RcHm_v2.0_Chr6g0312221 Rosa chinensis HOM05D007029 ORTHO05D008258 1.1e-62 243.8 170 68.2
Atru.chr7.2665 Acer truncatum HOM05D007029 ORTHO05D008258 1.8e-62 243.0 193 63.7
Hund03277 Selenicereus undatus HOM05D007029 ORTHO05D008258 3.1e-62 242.3 168 67.3
FAN20G2423 Fragaria x ananassa HOM05D007029 ORTHO05D008258 5.2e-62 241.5 170 67.6
Eucgr.C03998 Eucalyptus grandis HOM05D007029 ORTHO05D008258 6.8e-62 241.1 190 63.2
FvH4_2g30670 Fragaria vesca HOM05D007029 ORTHO05D008258 8.9e-62 240.7 170 67.1
Nn8g40869 Nelumbo nucifera HOM05D007029 ORTHO05D008258 1.2e-61 240.4 189 61.4
CsaV3_3G046940 Cucumis sativus L. HOM05D007029 ORTHO05D008258 3.4e-61 238.8 199 62.8
FAN24G0248 Fragaria x ananassa HOM05D007029 ORTHO05D008258 7.5e-61 237.7 170 66.5
Nitab4.5_0001159g0100 Nicotiana tabacum HOM05D007029 ORTHO05D008258 7.5e-61 237.7 165 67.9
Nitab4.5_0003963g0040 Nicotiana tabacum HOM05D007029 ORTHO05D008258 7.5e-61 237.7 165 67.9
Lj7A749T66 Lonicera japonica HOM05D007029 ORTHO05D008258 1.3e-60 236.9 190 62.6
Migut.A00446 Erythranthe guttata HOM05D007029 ORTHO05D008258 2.2e-60 236.1 183 61.7
MSTRG.25772 Avicennia marina HOM05D007029 ORTHO05D008258 2.9e-60 235.7 169 65.7
Ca_12881_v3 Cicer arietinum L. HOM05D007029 ORTHO05D008258 2.9e-60 235.7 180 65.0
EL10Ac2g03716 Beta vulgaris HOM05D007029 ORTHO05D008258 3.7e-60 235.3 178 65.2
GSVIVG01035546001 Vitis vinifera HOM05D007029 ORTHO05D008258 6.4e-60 234.6 165 69.7
CAN.G947.13 Capsicum annuum HOM05D007029 ORTHO05D008258 1.1e-59 233.8 173 63.0
CiPaw.07G214600 Carya illinoinensis HOM05D007029 ORTHO05D008258 1.4e-59 233.4 175 65.1
Os04g0606900 Oryza sativa ssp. japonica HOM05D007029 ORTHO05D008258 1.9e-59 233.0 176 62.5
Gohir.A06G106900 Gossypium hirsutum HOM05D007029 ORTHO05D008258 2.4e-59 232.6 163 69.3
Zm00001eb071440 Zea mays HOM05D007029 ORTHO05D008258 4.1e-59 231.9 184 62.5
Sopen12g032190 Solanum pennellii HOM05D007029 ORTHO05D008258 1.6e-58 229.9 173 61.8
QL12p024672 Quercus lobata HOM05D007029 ORTHO05D008258 3.9e-57 225.3 176 64.2
ATR0626G398 Amborella trichopoda HOM05D007029 ORTHO05D008258 8.6e-57 224.2 180 56.7
SalBow4G2612 Salvia bowleyana HOM05D007029 ORTHO05D008258 5.6e-56 221.5 158 66.5
CANSAT25G3139 Cannabis sativa HOM05D007029 ORTHO05D008258 6.2e-55 218.0 158 66.5
unitig_748.g7379 Utricularia gibba HOM05D007029 ORTHO05D008258 3.1e-54 215.7 184 60.9
Oeu059287.2 Olea europaea HOM05D007029 ORTHO05D008258 8.9e-54 214.2 176 59.7
ClCG05G017440 Citrullus lanatus HOM05D007029 ORTHO05D008258 1.2e-53 213.8 160 66.2
arahy.Tifrunner.gnm1.ann1.MMLL3W Arachis hypogaea HOM05D007029 ORTHO05D008258 1.5e-53 213.4 178 62.9
PGSC0003DMG400029282 Solanum tuberosum HOM05D007029 ORTHO05D008258 1.5e-53 213.4 163 62.6
HanXRQChr14g0454741 Helianthus annuus HOM05D007029 ORTHO05D008258 9.9e-53 210.7 169 58.0
Cc06_g08830 Coffea canephora HOM05D007029 ORTHO05D008258 1.9e-51 206.5 165 58.2
Glyma.17G201400 Glycine max HOM05D007029 ORTHO05D008258 3.2e-51 205.7 138 71.7
TWI63G1096 Tripterygium wilfordii HOM05D007029 ORTHO05D008258 5.4e-51 204.9 162 62.3
Mapoly0056s0124 Marchantia polymorpha HOM05D007029 ORTHO05D008258 6.0e-50 201.4 182 56.0
SGA_v2.0_scaffold27G11664 Striga asiatica HOM05D007029 ORTHO05D008258 7.8e-50 201.1 268 43.7
Ciclev10009808m.g Citrus clementina HOM05D007029 ORTHO05D008258 1.6e-47 193.4 168 60.7
AagrBONN_evm.TU.Sc2ySwM_368.1595 Anthoceros agrestis HOM05D007029 ORTHO05D008258 1.5e-45 186.8 161 55.9
arahy.Tifrunner.gnm1.ann1.J6QZET Arachis hypogaea HOM05D007029 ORTHO05D008258 2.0e-45 186.4 153 62.1
CBR_g21129 Chara braunii HOM05D007029 ORTHO05D008258 9.9e-45 184.1 168 56.0
Pp3c10_14520 Physcomitrium patens HOM05D007029 ORTHO05D008258 2.2e-44 183.0 161 52.2
MBI13_g31530_MAGBIO Magnolia biondii HOM05D007029 ORTHO05D008258 1.1e-43 180.6 194 51.0
SMO145G0271 Selaginella moellendorffii HOM05D007029 ORTHO05D008258 3.0e-41 172.6 158 51.3
COL.COLO4_18612 Corchorus olitorius HOM05D007029 ORTHO05D008258 3.3e-40 169.1 119 67.2
Actinidia22252 Actinidia chinensis HOM05D007029 ORTHO05D008258 1.8e-38 163.3 122 63.1
Oeu038914.4 Olea europaea HOM05D000263 ORTHO05D008258 2.4e-38 162.9 125 62.4
Haze_08560 Corylus avellana HOM05D007029 ORTHO05D008258 3.1e-38 162.5 160 54.4
C09p66660 Brassica napus HOM05D007029 ORTHO05D008258 4.0e-38 162.2 97 79.4
MCO07G593 Micromonas commoda HOM05D007029 ORTHO05D008258 6.9e-38 161.4 161 49.7
C09p66490 Brassica napus HOM05D007029 ORTHO05D008258 7.6e-37 157.9 189 50.3
AUR62020630 Chenopodium quinoa HOM05D007029 ORTHO05D008258 1.7e-36 156.8 105 67.6
AUR62038752 Chenopodium quinoa HOM05D007029 ORTHO05D008258 2.2e-36 156.4 120 60.0
Dinv09200 Davidia involucrata HOM05D007029 ORTHO05D008258 2.2e-36 156.4 140 58.6
Lsat_1_v5_gn_2_109441 Lactuca sativa HOM05D007029 ORTHO05D008258 2.9e-36 156.0 133 53.4
SEGI_22347 Sequoiadendron giganteum HOM05D007029 ORTHO05D008258 3.8e-36 155.6 132 56.1
Ah.10g033770 Amaranthus hybridus HOM05D007029 ORTHO05D008258 4.9e-36 155.2 127 59.1
CDE04G2652 Ceratophyllum demersum HOM05D000178 ORTHO05D000229 1.1e-35 154.1 109 68.8
Gohir.D06G109100 Gossypium hirsutum HOM05D007029 ORTHO05D008258 1.1e-35 154.1 107 70.1
Cre16.g680100 Chlamydomonas reinhardtii HOM05D007029 ORTHO05D008258 1.9e-35 153.3 162 53.1
Thhalv10000503m.g Eutrema salsugineum HOM05D007029 ORTHO05D008258 7.1e-35 151.4 132 64.4
VMungo0647G0111 Vigna mungo HOM05D007029 ORTHO05D008258 1.3e-33 147.1 128 57.8
Solyc12g096330.3 Solanum lycopersicum HOM05D007029 ORTHO05D008258 1.1e-32 144.1 97 68.0
Medtr1g010000 Medicago truncatula HOM05D007029 ORTHO05D008258 4.8e-31 138.7 103 64.1
Peaxi162Scf00459g00835 Petunia axillaris HOM05D007029 ORTHO05D008258 1.4e-30 137.1 109 61.5
Oeu059279.1 Olea europaea HOM05D007029 ORTHO05D008258 2.0e-29 133.3 99 64.6
Hma1.2p1_0443F.1_g154050 Hydrangea macrophylla HOM05D007029 ORTHO05D008258 7.9e-26 121.3 75 81.3
PRCOL_00001289 Prasinoderma coloniale HOM05D007029 ORTHO05D008258 6.2e-23 111.7 140 42.1
Haze_21697 Corylus avellana HOM05D000022 ORTHO05D010831 1.1e-19 100.9 121 43.8
COL.COLO4_02059 Corchorus olitorius HOM05D007029 ORTHO05D008258 1.1e-16 90.9 155 32.3
Hma1.2p1_0443F.1_g154040 Hydrangea macrophylla HOM05D007029 ORTHO05D008258 5.6e-16 88.6 83 53.0
ECA238G0229 Erigeron canadensis HOM05D007029 ORTHO05D008258 1.4e-14 84.0 71 50.7
Hma1.2p1_0443F.1_g154060 Hydrangea macrophylla HOM05D007029 ORTHO05D008258 9.0e-14 81.3 49 81.6
CDE07G1585 Ceratophyllum demersum HOM05D003168 ORTHO05D003590 7.1e-11 71.6 49 69.4
AT5G10605 Arabidopsis thaliana HOM05D007029 ORTHO05D008258 2.2e-07 60.1 36 83.3


User provided reference genes

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