Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG3G16430 Aethionema arabicum HOM05D006706 ORTHO05D008794 9.3e-104 380.2 188 100.0
BcaB01g06271 Brassica carinata HOM05D006706 ORTHO05D008794 1.7e-76 289.7 187 78.6
BcaB01g05507 Brassica carinata HOM05D006706 ORTHO05D008794 2.0e-74 282.7 188 77.7
C03p05410 Brassica napus HOM05D006706 ORTHO05D008794 2.0e-74 282.7 188 77.7
A03p04700 Brassica napus HOM05D006706 ORTHO05D008794 2.9e-73 278.9 189 78.3
BraA03t09810Z Brassica rapa HOM05D006706 ORTHO05D008794 5.0e-73 278.1 190 77.9
Sp6g32760 Schrenkiella parvula HOM05D006706 ORTHO05D008794 1.5e-72 276.6 188 76.6
AL6G21240 Arabidopsis lyrata HOM05D006706 ORTHO05D008794 1.9e-72 276.2 190 76.8
CARHR202620 Cardamine hirsuta HOM05D006706 ORTHO05D008794 2.5e-72 275.8 188 77.1
Carub.0006s0917 Capsella rubella HOM05D006706 ORTHO05D008794 4.2e-72 275.0 189 76.7
AT5G10700 Arabidopsis thaliana HOM05D006706 ORTHO05D008794 2.7e-71 272.3 184 77.2
BcaC04g19291 Brassica carinata HOM05D006706 ORTHO05D008794 4.7e-71 271.6 190 74.2
Thhalv10014763m.g Eutrema salsugineum HOM05D006706 ORTHO05D008794 2.3e-70 269.2 189 75.7
THA.LOC104814973 Tarenaya hassleriana HOM05D006706 ORTHO05D008794 8.0e-63 244.2 194 69.6
CAN.G566.65 Capsicum annuum HOM05D006706 ORTHO05D008794 7.3e-56 221.1 170 67.1
Lj7C748T8 Lonicera japonica HOM05D006706 ORTHO05D008794 1.2e-55 220.3 175 63.4
Peaxi162Scf00459g00840 Petunia axillaris HOM05D006706 ORTHO05D008794 1.6e-55 219.9 161 68.9
Prupe.1G459500 Prunus persica HOM05D006706 ORTHO05D008794 1.4e-54 216.9 172 65.1
FAN27G0070 Fragaria x ananassa HOM05D006706 ORTHO05D008794 1.8e-54 216.5 145 73.8
Sabra18G0015100 Salix brachista HOM05D006706 ORTHO05D008794 1.8e-54 216.5 162 67.9
VMungo1309G0608 Vigna mungo HOM05D006706 ORTHO05D008794 1.8e-54 216.5 145 72.4
Solyc12g096390.2 Solanum lycopersicum HOM05D006706 ORTHO05D008794 2.3e-54 216.1 181 64.1
GSVIVG01035513001 Vitis vinifera HOM05D006706 ORTHO05D008794 2.3e-54 216.1 164 62.8
CsaV3_2G031370 Cucumis sativus L. HOM05D006706 ORTHO05D008794 3.0e-54 215.7 144 74.3
Duzib187G1270 Durio zibethinus HOM05D006706 ORTHO05D008794 3.0e-54 215.7 145 73.1
RcHm_v2.0_Chr1g0366021 Rosa chinensis HOM05D006706 ORTHO05D008794 3.0e-54 215.7 145 73.1
QL12p025335 Quercus lobata HOM05D006706 ORTHO05D008794 4.0e-54 215.3 184 63.6
FvH4_2g36680 Fragaria vesca HOM05D006706 ORTHO05D008794 5.2e-54 214.9 145 73.1
FAN20G0608 Fragaria x ananassa HOM05D006706 ORTHO05D008794 5.2e-54 214.9 145 73.1
Ciclev10009845m.g Citrus clementina HOM05D006706 ORTHO05D008794 6.8e-54 214.5 143 74.8
Haze_21755 Corylus avellana HOM05D006706 ORTHO05D008794 6.8e-54 214.5 176 63.6
Manes.03G004300 Manihot esculenta HOM05D006706 ORTHO05D008794 8.9e-54 214.2 130 76.9
Potri.018G008000 Populus trichocarpa HOM05D006706 ORTHO05D008794 8.9e-54 214.2 162 66.7
Thecc.09G008100 Theobroma cacao HOM05D006706 ORTHO05D008794 8.9e-54 214.2 152 70.4
Cpa.g.sc23.24 Carica papaya HOM05D006706 ORTHO05D008794 2.6e-53 212.6 154 70.1
CiPaw.08G020300 Carya illinoinensis HOM05D006706 ORTHO05D008794 4.4e-53 211.8 146 72.6
Ca_15656_v3 Cicer arietinum L. HOM05D006706 ORTHO05D008794 4.4e-53 211.8 148 72.3
Sopen12g032240 Solanum pennellii HOM05D006706 ORTHO05D008794 4.4e-53 211.8 118 83.9
Rhsim07G0178100 Rhododendron simsii HOM05D006706 ORTHO05D008794 5.7e-53 211.5 118 82.2
Cfa013279 Carpinus fangiana HOM05D006706 ORTHO05D008794 9.8e-53 210.7 151 70.2
Eucgr.C04010 Eucalyptus grandis HOM05D006706 ORTHO05D008794 9.8e-53 210.7 159 66.7
PGR044G2738 Punica granatum HOM05D006706 ORTHO05D008794 9.8e-53 210.7 192 58.9
Ca_15664_v3 Cicer arietinum L. HOM05D006706 ORTHO05D008794 1.3e-52 210.3 144 72.9
MD08G1127800 Malus domestica HOM05D006706 ORTHO05D008794 1.3e-52 210.3 190 60.5
Nn3g19671 Nelumbo nucifera HOM05D006706 ORTHO05D008794 1.3e-52 210.3 138 71.7
COL.COLO4_19024 Corchorus olitorius HOM05D006706 ORTHO05D008794 1.7e-52 209.9 148 69.6
Haze_21752 Corylus avellana HOM05D006706 ORTHO05D008794 1.7e-52 209.9 128 78.1
Migut.A00436 Erythranthe guttata HOM05D006706 ORTHO05D008794 1.7e-52 209.9 145 66.9
SalBow4G1165 Salvia bowleyana HOM05D006706 ORTHO05D008794 1.7e-52 209.9 117 81.2
Gorai.010G122100 Gossypium raimondii HOM05D006706 ORTHO05D008794 2.2e-52 209.5 144 70.1
Psat0s1809g0040 Pisum sativum HOM05D006706 ORTHO05D008794 2.2e-52 209.5 168 63.7
PGSC0003DMG400029370 Solanum tuberosum HOM05D006706 ORTHO05D008794 2.2e-52 209.5 118 82.2
Nitab4.5_0010092g0010 Nicotiana tabacum HOM05D006706 ORTHO05D008794 2.9e-52 209.1 119 80.7
arahy.Tifrunner.gnm1.ann1.G0PQAF Arachis hypogaea HOM05D006706 ORTHO05D008794 3.7e-52 208.8 148 69.6
RcHm_v2.0_Chr6g0305051 Rosa chinensis HOM05D006706 ORTHO05D008794 3.7e-52 208.8 145 72.4
Duzib168G0001 Durio zibethinus HOM05D006706 ORTHO05D008794 4.9e-52 208.4 145 71.7
Atru.chr7.2653 Acer truncatum HOM05D006706 ORTHO05D008794 6.4e-52 208.0 125 77.6
TPR.G12362 Trifolium pratense HOM05D006706 ORTHO05D008794 6.4e-52 208.0 145 69.7
CANSAT78G2093 Cannabis sativa HOM05D006706 ORTHO05D008794 8.3e-52 207.6 193 59.1
Actinidia22256 Actinidia chinensis HOM05D006706 ORTHO05D008794 1.1e-51 207.2 118 81.4
AUR62020287 Chenopodium quinoa HOM05D006706 ORTHO05D008794 1.1e-51 207.2 135 75.6
Sed0007748 Sechium edule HOM05D006706 ORTHO05D008794 1.1e-51 207.2 145 71.7
Lsat_1_v5_gn_3_19441 Lactuca sativa HOM05D006706 ORTHO05D008794 1.4e-51 206.8 167 64.1
Glyma.04G075900 Glycine max HOM05D006706 ORTHO05D008794 1.8e-51 206.5 146 69.9
MSTRG.25780 Avicennia marina HOM05D006706 ORTHO05D008794 2.4e-51 206.1 165 63.6
Nitab4.5_0001159g0140 Nicotiana tabacum HOM05D006706 ORTHO05D008794 2.4e-51 206.1 119 79.8
Oeu018568.1 Olea europaea HOM05D006706 ORTHO05D008794 2.4e-51 206.1 177 59.9
Dinv26561 Davidia involucrata HOM05D006706 ORTHO05D008794 3.2e-51 205.7 169 62.7
TWI34G0378 Tripterygium wilfordii HOM05D006706 ORTHO05D008794 3.2e-51 205.7 176 63.1
MELO3C011186.2 Cucumis melo HOM05D006706 ORTHO05D008794 5.4e-51 204.9 146 72.6
DCAR_006314 Daucus carota HOM05D006706 ORTHO05D008794 5.4e-51 204.9 136 70.6
Lalb_Chr23g0269141 Lupinus albus HOM05D006706 ORTHO05D008794 5.4e-51 204.9 170 62.9
arahy.Tifrunner.gnm1.ann1.92NGGW Arachis hypogaea HOM05D006706 ORTHO05D008794 7.0e-51 204.5 146 68.5
ECA246G3311 Erigeron canadensis HOM05D006706 ORTHO05D008794 9.2e-51 204.1 137 73.0
vmacro05047 Vaccinium macrocarpon HOM05D006706 ORTHO05D008794 9.2e-51 204.1 189 58.7
Lj1g0012669 Lotus japonicus HOM05D006706 ORTHO05D008794 1.2e-50 203.8 149 71.1
PSO063G0792 Papaver somniferum HOM05D006706 ORTHO05D008794 1.6e-50 203.4 147 70.1
PSO170G0804 Papaver somniferum HOM05D006706 ORTHO05D008794 2.0e-50 203.0 146 68.5
Hund07113 Selenicereus undatus HOM05D006706 ORTHO05D008794 2.0e-50 203.0 135 71.9
Zm00001eb071580 Zea mays HOM05D006706 ORTHO05D008794 2.7e-50 202.6 186 58.1
CDE02G4751 Ceratophyllum demersum HOM05D006706 ORTHO05D008794 3.5e-50 202.2 155 65.8
Glyma.06G077100 Glycine max HOM05D006706 ORTHO05D008794 3.5e-50 202.2 121 78.5
Phvul.009G101700 Phaseolus vulgaris HOM05D006706 ORTHO05D008794 3.5e-50 202.2 142 69.7
ATR0580G320 Amborella trichopoda HOM05D006706 ORTHO05D008794 4.6e-50 201.8 118 80.5
HanXRQChr17g0538031 Helianthus annuus HOM05D006706 ORTHO05D008794 5.9e-50 201.4 137 70.8
Aqoxy7G02908 Aquilegia oxysepala HOM05D006706 ORTHO05D008794 1.0e-49 200.7 118 78.0
Medtr3g108900 Medicago truncatula HOM05D006706 ORTHO05D008794 1.3e-49 200.3 145 71.0
MBI14_g10732_MAGBIO Magnolia biondii HOM05D006706 ORTHO05D008794 1.7e-49 199.9 182 57.7
CSS0022194 Camellia sinensis var. sinensis HOM05D006706 ORTHO05D008794 2.3e-49 199.5 131 72.5
CiPaw.07G211900 Carya illinoinensis HOM05D006706 ORTHO05D008794 3.0e-49 199.1 140 70.7
Os04g0605200 Oryza sativa ssp. japonica HOM05D006706 ORTHO05D008794 1.9e-48 196.4 118 74.6
HPP92_021967 Vanilla planifolia HOM05D006706 ORTHO05D008794 8.9e-46 187.6 135 66.7
HPP92_021941 Vanilla planifolia HOM05D006706 ORTHO05D008794 1.2e-45 187.2 180 54.4
AUR62037716 Chenopodium quinoa HOM05D006706 ORTHO05D008794 1.5e-45 186.8 114 77.2
SEGI_18071 Sequoiadendron giganteum HOM05D006706 ORTHO05D008794 1.5e-45 186.8 126 67.5
AagrBONN_evm.TU.Sc2ySwM_228.645 Anthoceros agrestis HOM05D000036 ORTHO05D038461 2.6e-45 186.0 121 68.6
Pp3c18_3890 Physcomitrium patens HOM05D006706 ORTHO05D008794 2.4e-43 179.5 136 61.0
SMO203G0167 Selaginella moellendorffii HOM05D006706 ORTHO05D008794 3.2e-43 179.1 120 65.8
SGA_v2.0_scaffold193G40663 Striga asiatica HOM05D006706 ORTHO05D008794 4.1e-43 178.7 160 56.9
ClCG08G012660 Citrullus lanatus HOM05D006706 ORTHO05D008794 2.7e-42 176.0 205 49.8
Mapoly0013s0161 Marchantia polymorpha HOM05D006706 ORTHO05D008794 1.1e-40 170.6 141 56.7
Ah.10g024780 Amaranthus hybridus HOM05D006706 ORTHO05D008794 1.1e-38 164.1 99 74.7
MD15G1107200 Malus domestica HOM05D006706 ORTHO05D008794 1.8e-38 163.3 200 52.0
Cre10.g449350 Chlamydomonas reinhardtii HOM05D006706 ORTHO05D008794 2.9e-36 156.0 139 53.2
MCO07G367 Micromonas commoda HOM05D006706 ORTHO05D008794 4.9e-36 155.2 125 56.8
unitig_21.g20325 Utricularia gibba HOM05D006706 ORTHO05D008794 2.7e-34 149.4 151 47.7
CBR_g3167 Chara braunii HOM05D006706 ORTHO05D008794 4.6e-34 148.7 130 55.4
A10p26910 Brassica napus HOM05D006706 ORTHO05D028018 9.6e-24 114.4 104 61.5
Gohir.D06G107400 Gossypium hirsutum HOM05D006706 ORTHO05D008794 1.1e-22 110.9 70 72.9
Sc06g0000170 Simmondsia chinensis HOM05D006706 ORTHO05D008794 1.1e-22 110.9 85 60.0
Gohir.A06G105300 Gossypium hirsutum HOM05D006706 ORTHO05D008794 9.0e-22 107.8 96 56.2
TAR636G3689 Trochodendron aralioides HOM05D006706 ORTHO05D008794 1.5e-21 107.1 125 49.6
Haze_27087 Corylus avellana HOM05D006706 ORTHO05D008794 9.9e-21 104.4 119 47.9
EL10Ac2g02413 Beta vulgaris HOM05D006706 ORTHO05D008794 1.7e-20 103.6 61 78.7
PRCOL_00004161 Prasinoderma coloniale HOM05D006706 ORTHO05D008794 1.9e-19 100.1 128 45.3
CDE06G2578 Ceratophyllum demersum HOM05D006706 ORTHO05D008794 5.6e-16 88.6 60 66.7
BraA10t44742Z Brassica rapa HOM05D037374 ORTHO05D028018 1.6e-07 60.5 81 49.4
Sed0005624 Sechium edule HOM05D006706 ORTHO05D373521 6.9e-06 55.1 59 49.2


User provided reference genes

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