Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG3G15550 Aethionema arabicum HOM05D006609 ORTHO05D008551 1.7e-140 502.7 254 100.0
CARHR201580 Cardamine hirsuta HOM05D006609 ORTHO05D008551 6.9e-126 454.1 252 88.1
Sp6g31980 Schrenkiella parvula HOM05D006609 ORTHO05D008551 1.5e-125 453.0 252 87.3
AL6G22350 Arabidopsis lyrata HOM05D006609 ORTHO05D008551 7.6e-125 450.7 252 87.7
Thhalv10014470m.g Eutrema salsugineum HOM05D006609 ORTHO05D008551 9.3e-123 443.7 252 85.7
BraA10t44672Z Brassica rapa HOM05D006609 ORTHO05D008551 3.9e-121 438.3 252 84.9
A02p01130 Brassica napus HOM05D006609 ORTHO05D008551 2.8e-119 432.2 255 84.3
BraA02t05092Z Brassica rapa HOM05D006609 ORTHO05D008551 3.7e-119 431.8 256 84.0
BcaC03g13384 Brassica carinata HOM05D006609 ORTHO05D008551 4.0e-118 428.3 256 82.8
C02p05310 Brassica napus HOM05D006609 ORTHO05D008551 4.0e-118 428.3 256 82.8
BolC2t06479H Brassica oleracea HOM05D006609 ORTHO05D008551 1.5e-117 426.4 254 83.1
BcaC04g19208 Brassica carinata HOM05D006609 ORTHO05D008551 1.7e-116 422.9 252 83.3
BolC9t59347H Brassica oleracea HOM05D006609 ORTHO05D008551 1.7e-116 422.9 252 83.3
A10p26110 Brassica napus HOM05D006609 ORTHO05D008551 4.9e-116 421.4 278 76.3
Carub.0006s1012 Capsella rubella HOM05D006609 ORTHO05D008551 1.8e-113 412.9 233 86.7
C09p65180 Brassica napus HOM05D006609 ORTHO05D008551 1.1e-112 410.2 252 82.1
THA.LOC104808485 Tarenaya hassleriana HOM05D006609 ORTHO05D008551 1.0e-108 397.1 252 77.4
BcaB08g37036 Brassica carinata HOM05D006609 ORTHO05D008551 1.1e-102 377.1 255 76.1
AT5G11640 Arabidopsis thaliana HOM05D006609 ORTHO05D008551 1.0e-92 344.0 188 87.8
Gohir.D05G047900 Gossypium hirsutum HOM05D006609 ORTHO05D008551 3.5e-85 318.9 256 60.5
Thecc.09G046100 Theobroma cacao HOM05D006609 ORTHO05D008551 1.6e-82 310.1 256 59.4
Duzib168G0257 Durio zibethinus HOM05D006609 ORTHO05D008551 6.1e-82 308.1 257 58.8
GSVIVG01035613001 Vitis vinifera HOM05D006609 ORTHO05D008551 1.8e-81 306.6 257 58.8
FvH4_2g35350 Fragaria vesca HOM05D006609 ORTHO05D008551 5.7e-80 301.6 257 58.0
Manes.16G074700 Manihot esculenta HOM05D006609 ORTHO05D008551 2.8e-79 299.3 256 57.0
CiPaw.07G203500 Carya illinoinensis HOM05D006609 ORTHO05D008551 3.7e-79 298.9 256 58.2
Actinidia13339 Actinidia chinensis HOM05D006609 ORTHO05D008551 4.8e-79 298.5 246 60.2
RcHm_v2.0_Chr6g0306561 Rosa chinensis HOM05D006609 ORTHO05D008551 8.2e-79 297.7 257 58.0
CSS0000910 Camellia sinensis var. sinensis HOM05D006609 ORTHO05D008551 9.1e-78 294.3 255 57.3
Potri.006G237600 Populus trichocarpa HOM05D006609 ORTHO05D008551 2.0e-77 293.1 241 58.9
MD15G1092400 Malus domestica HOM05D006609 ORTHO05D008551 4.5e-77 292.0 257 56.8
Cfa013375 Carpinus fangiana HOM05D006609 ORTHO05D008551 5.9e-77 291.6 255 56.5
Gorai.009G049200 Gossypium raimondii HOM05D006609 ORTHO05D008551 1.3e-76 290.4 237 59.9
TWI63G1544 Tripterygium wilfordii HOM05D006609 ORTHO05D008551 5.0e-76 288.5 254 57.1
MD08G1113000 Malus domestica HOM05D006609 ORTHO05D008551 1.2e-74 283.9 257 56.0
COL.COLO4_20980 Corchorus olitorius HOM05D006609 ORTHO05D008551 1.0e-73 280.8 256 53.9
Ciclev10009282m.g Citrus clementina HOM05D006609 ORTHO05D008551 1.4e-73 280.4 249 56.2
FAN15G1983 Fragaria x ananassa HOM05D006609 ORTHO05D008551 1.8e-73 280.0 256 55.9
TAR626G1286 Trochodendron aralioides HOM05D006609 ORTHO05D008551 5.2e-73 278.5 246 57.3
Migut.A00197 Erythranthe guttata HOM05D006609 ORTHO05D008551 2.0e-72 276.6 253 54.5
MBI04_g06585_MAGBIO Magnolia biondii HOM05D006609 ORTHO05D008551 4.4e-72 275.4 255 56.1
FAN27G2415 Fragaria x ananassa HOM05D006609 ORTHO05D008551 9.8e-72 274.2 257 54.5
Hund03393 Selenicereus undatus HOM05D006609 ORTHO05D008551 2.2e-71 273.1 246 57.7
Lsat_1_v5_gn_6_22680 Lactuca sativa HOM05D006609 ORTHO05D008551 2.8e-71 272.7 247 56.7
CANSAT25G3446 Cannabis sativa HOM05D006609 ORTHO05D008551 6.3e-71 271.6 257 53.7
Sabra06G0185800 Salix brachista HOM05D006609 ORTHO05D008551 1.4e-70 270.4 290 49.3
Aqoxy7G01461 Aquilegia oxysepala HOM05D006609 ORTHO05D008551 1.8e-70 270.0 255 53.7
Sc09g0009360 Simmondsia chinensis HOM05D006609 ORTHO05D008551 2.4e-70 269.6 246 56.5
ClCG11G015120 Citrullus lanatus HOM05D006609 ORTHO05D008551 3.1e-70 269.2 259 54.1
MSTRG.25911 Avicennia marina HOM05D006609 ORTHO05D008551 4.1e-70 268.9 249 55.0
Hma1.2p1_1138F.1_g260815 Hydrangea macrophylla HOM05D006609 ORTHO05D008551 4.1e-70 268.9 238 56.7
Lj1g0027455 Lotus japonicus HOM05D006609 ORTHO05D008551 4.1e-70 268.9 248 55.2
PGR031G0123 Punica granatum HOM05D006609 ORTHO05D008551 5.4e-70 268.5 249 56.6
Glyma.17G192700 Glycine max HOM05D006609 ORTHO05D008551 7.0e-70 268.1 246 54.9
BcaNung02663 Brassica carinata HOM05D006609 ORTHO05D008551 9.1e-70 267.7 146 87.7
FAN20G1237 Fragaria x ananassa HOM05D006609 ORTHO05D008551 9.1e-70 267.7 257 54.1
Atru.chr7.2079 Acer truncatum HOM05D006609 ORTHO05D008551 1.6e-69 266.9 215 58.6
MELO3C003467.2 Cucumis melo HOM05D006609 ORTHO05D008551 1.6e-69 266.9 248 54.4
Ah.16g105840 Amaranthus hybridus HOM05D006609 ORTHO05D008551 4.5e-69 265.4 248 54.8
Sed0023433 Sechium edule HOM05D006609 ORTHO05D008551 5.9e-69 265.0 248 53.2
Sopen12g031720 Solanum pennellii HOM05D006609 ORTHO05D008551 7.7e-69 264.6 246 54.5
Lalb_Chr24g0402671 Lupinus albus HOM05D006609 ORTHO05D008551 1.0e-68 264.2 250 54.4
Nn8g39112 Nelumbo nucifera HOM05D006609 ORTHO05D008551 1.0e-68 264.2 258 54.7
Dinv27894 Davidia involucrata HOM05D006609 ORTHO05D008551 1.3e-68 263.8 239 56.5
Peaxi162Scf00064g01521 Petunia axillaris HOM05D006609 ORTHO05D008551 2.2e-68 263.1 249 52.6
Eucgr.C00603 Eucalyptus grandis HOM05D006609 ORTHO05D008551 2.9e-68 262.7 230 60.4
arahy.Tifrunner.gnm1.ann1.TZ2NYQ Arachis hypogaea HOM05D006609 ORTHO05D008551 6.5e-68 261.5 258 53.9
arahy.Tifrunner.gnm1.ann1.519I88 Arachis hypogaea HOM05D006609 ORTHO05D008551 8.5e-68 261.2 258 53.9
VMungo0647G0700 Vigna mungo HOM05D006609 ORTHO05D008551 1.1e-67 260.8 246 54.5
Psat6g037080 Pisum sativum HOM05D006609 ORTHO05D008551 7.2e-67 258.1 248 53.2
Cc08_g09720 Coffea canephora HOM05D006609 ORTHO05D008551 1.6e-66 256.9 245 55.1
TPR.G24534 Trifolium pratense HOM05D006609 ORTHO05D008551 1.6e-66 256.9 249 53.0
Rhsim02G0176600 Rhododendron simsii HOM05D006609 ORTHO05D008551 2.1e-66 256.5 245 53.9
RhsimUnG0061900 Rhododendron simsii HOM05D006609 ORTHO05D008551 2.1e-66 256.5 245 53.9
Gohir.A05G046200 Gossypium hirsutum HOM05D006609 ORTHO05D008551 2.7e-66 256.1 212 60.4
CAN.G208.62 Capsicum annuum HOM05D006609 ORTHO05D008551 4.7e-66 255.4 246 52.0
Ca_03364_v3 Cicer arietinum L. HOM05D006609 ORTHO05D008551 4.7e-66 255.4 246 54.5
Phvul.001G063300 Phaseolus vulgaris HOM05D006609 ORTHO05D008551 4.7e-66 255.4 260 50.8
QL12p041270 Quercus lobata HOM05D006609 ORTHO05D008551 6.1e-66 255.0 230 55.7
Haze_21897 Corylus avellana HOM05D006609 ORTHO05D008551 1.0e-65 254.2 255 51.8
ATR0705G113 Amborella trichopoda HOM05D006609 ORTHO05D008551 1.4e-65 253.8 253 51.0
CDE02G0347 Ceratophyllum demersum HOM05D006609 ORTHO05D008551 2.3e-65 253.1 246 52.8
AUR62042442 Chenopodium quinoa HOM05D006609 ORTHO05D008551 2.3e-65 253.1 245 53.5
Medtr1g007120 Medicago truncatula HOM05D006609 ORTHO05D008551 5.7e-64 248.4 249 52.2
CsaV3_3G048520 Cucumis sativus L. HOM05D006609 ORTHO05D008551 2.8e-63 246.1 229 55.0
PSO173G0006 Papaver somniferum HOM05D006609 ORTHO05D008551 4.1e-62 242.3 257 47.5
PSO824G0011 Papaver somniferum HOM05D006609 ORTHO05D008551 5.4e-62 241.9 256 48.0
SalBow4G0386 Salvia bowleyana HOM05D006609 ORTHO05D008551 7.0e-62 241.5 230 54.3
HPP92_021778 Vanilla planifolia HOM05D006609 ORTHO05D008551 1.6e-61 240.4 245 51.0
Solyc12g095820.3 Solanum lycopersicum HOM05D006609 ORTHO05D008551 4.5e-61 238.8 214 55.1
PGSC0003DMG400029395 Solanum tuberosum HOM05D006609 ORTHO05D008551 1.7e-60 236.9 214 54.7
Zm00001eb337980 Zea mays HOM05D006609 ORTHO05D008551 5.0e-60 235.3 243 53.1
Os01g0200400 Oryza sativa ssp. japonica HOM05D006609 ORTHO05D008551 5.6e-59 231.9 237 51.1
SGA_v2.0_scaffold243G44286 Striga asiatica HOM05D006609 ORTHO05D008551 1.8e-57 226.9 242 50.4
Cpa.g.sc78.16 Carica papaya HOM05D006609 ORTHO05D008551 7.5e-56 221.5 224 54.0
HanXRQChr13g0402211 Helianthus annuus HOM05D006609 ORTHO05D008551 1.4e-54 217.2 222 50.9
Nitab4.5_0001737g0100 Nicotiana tabacum HOM05D006609 ORTHO05D008551 1.6e-53 213.8 248 47.6
DCAR_000757 Daucus carota HOM05D006609 ORTHO05D010582 1.8e-49 200.3 243 46.9
Nitab4.5_0001309g0120 Nicotiana tabacum HOM05D006609 ORTHO05D008551 2.0e-48 196.8 329 37.7
Prupe.1G447200 Prunus persica HOM05D006609 ORTHO05D008551 2.0e-48 196.8 173 55.5
AUR62009264 Chenopodium quinoa HOM05D006609 ORTHO05D008551 4.6e-45 185.7 155 58.1
ECA233G1748 Erigeron canadensis HOM05D006609 ORTHO05D008551 1.0e-36 157.9 132 60.6
unitig_93.g30708 Utricularia gibba HOM05D006609 ORTHO05D008551 4.7e-34 149.1 249 38.6
Lsat_1_v5_gn_5_12101 Lactuca sativa HOM05D006609 ORTHO05D008551 8.4e-31 138.3 143 49.0
vmacro11054 Vaccinium macrocarpon HOM05D006609 ORTHO05D008551 1.9e-30 137.1 107 66.4
FAN24G0356 Fragaria x ananassa HOM05D006609 ORTHO05D008551 5.6e-27 125.6 116 52.6
FAN24G3337 Fragaria x ananassa HOM05D006609 ORTHO05D008551 5.6e-27 125.6 116 52.6
EL10Ac2g04002 Beta vulgaris HOM05D006609 ORTHO05D008551 4.9e-23 112.5 204 33.8
SMO144G0045 Selaginella moellendorffii HOM05D006609 ORTHO05D008551 1.2e-21 107.8 154 42.2
HanXRQChr16g0519661 Helianthus annuus HOM05D006609 ORTHO05D008551 2.5e-19 100.1 128 45.3
FAN24G1965 Fragaria x ananassa HOM05D006609 ORTHO05D008551 4.3e-19 99.4 88 58.0
SEGI_38144 Sequoiadendron giganteum HOM05D006609 ORTHO05D008551 1.3e-18 97.8 95 48.4
PRCOL_00006038 Prasinoderma coloniale HOM05D006609 ORTHO05D008551 1.7e-15 87.4 195 29.2
SEGI_39152 Sequoiadendron giganteum HOM05D006609 ORTHO05D008551 1.6e-13 80.9 104 43.3
Cre10.g426400 Chlamydomonas reinhardtii HOM05D006609 ORTHO05D008551 2.3e-12 77.0 219 27.9
QL09p008974 Quercus lobata HOM05D006609 ORTHO05D008551 2.1e-10 70.5 62 51.6
Haze_26101 Corylus avellana HOM05D006609 ORTHO05D008551 1.7e-07 60.8 81 39.5


User provided reference genes

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