Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG3G15390 Aethionema arabicum HOM05D006276 ORTHO05D007724 7.6e-239 830.1 417 100.0
Thhalv10014178m.g Eutrema salsugineum HOM05D006276 ORTHO05D007724 7.8e-127 458.0 322 75.5
AT5G11810 Arabidopsis thaliana HOM05D006276 ORTHO05D007724 4.3e-125 452.2 319 75.2
Carub.0006s1034 Capsella rubella HOM05D006276 ORTHO05D007724 2.1e-124 449.9 315 76.2
Sp6g31790 Schrenkiella parvula HOM05D006276 ORTHO05D007724 2.4e-123 446.4 314 75.5
BraA03t09860Z Brassica rapa HOM05D006276 ORTHO05D007724 2.7e-119 433.0 314 74.2
BraA10t44656Z Brassica rapa HOM05D006276 ORTHO05D007724 5.6e-117 425.2 316 72.8
A03p05210 Brassica napus HOM05D006276 ORTHO05D007724 2.8e-116 422.9 314 72.9
C03p06010 Brassica napus HOM05D006276 ORTHO05D007724 4.8e-116 422.2 314 73.2
A10p25940 Brassica napus HOM05D006276 ORTHO05D007724 7.6e-114 414.8 316 71.5
BolC3t13112H Brassica oleracea HOM05D006276 ORTHO05D007724 6.4e-113 411.8 314 71.0
BolC9t59330H Brassica oleracea HOM05D006276 ORTHO05D007724 1.1e-112 411.0 316 71.2
C09p65020 Brassica napus HOM05D006276 ORTHO05D007724 1.6e-111 407.1 316 70.6
BcaC04g19193 Brassica carinata HOM05D006276 ORTHO05D007724 1.1e-109 401.0 318 69.5
CARHR201350 Cardamine hirsuta HOM05D006276 ORTHO05D007724 1.2e-103 380.9 246 80.9
THA.LOC104811244 Tarenaya hassleriana HOM05D006276 ORTHO05D007724 2.1e-100 370.2 322 62.4
AL6G22560 Arabidopsis lyrata HOM05D006276 ORTHO05D007724 9.0e-99 364.8 236 80.1
BcaB01g05452 Brassica carinata HOM05D006276 ORTHO05D007724 1.4e-96 357.5 314 64.3
Hma1.2p1_0482F.1_g162490 Hydrangea macrophylla HOM05D006276 ORTHO05D007724 2.5e-80 303.5 324 49.4
Sabra06G0178200 Salix brachista HOM05D006276 ORTHO05D007724 8.8e-78 295.0 353 46.7
MD15G1060500 Malus domestica HOM05D006276 ORTHO05D007724 3.3e-77 293.1 317 50.2
COL.COLO4_21052 Corchorus olitorius HOM05D006276 ORTHO05D007724 4.8e-76 289.3 326 50.9
RcHm_v2.0_Chr6g0290791 Rosa chinensis HOM05D006276 ORTHO05D007724 4.8e-76 289.3 328 50.0
Manes.16G079900 Manihot esculenta HOM05D006276 ORTHO05D007724 1.1e-75 288.1 329 48.9
RcHm_v2.0_Chr6g0310851 Rosa chinensis HOM05D006276 ORTHO05D007724 5.3e-75 285.8 328 50.3
Eucgr.C03044 Eucalyptus grandis HOM05D006276 ORTHO05D007724 9.1e-75 285.0 335 49.3
QL02p001268 Quercus lobata HOM05D006276 ORTHO05D007724 2.6e-74 283.5 331 47.1
FvH4_2g31970 Fragaria vesca HOM05D006276 ORTHO05D007724 1.0e-73 281.6 328 49.1
Thecc.09G053300 Theobroma cacao HOM05D006276 ORTHO05D007724 1.0e-73 281.6 332 47.9
Potri.006G230000 Populus trichocarpa HOM05D006276 ORTHO05D007724 1.7e-73 280.8 331 46.8
Ciclev10008931m.g Citrus clementina HOM05D006276 ORTHO05D007724 2.2e-73 280.4 331 48.0
Rhsim07G0142500 Rhododendron simsii HOM05D006276 ORTHO05D007724 2.2e-73 280.4 323 48.0
MD08G1060900 Malus domestica HOM05D006276 ORTHO05D007724 2.9e-73 280.0 317 49.5
TWI34G0536 Tripterygium wilfordii HOM05D006276 ORTHO05D007724 1.9e-72 277.3 326 48.8
Atru.chr7.1056 Acer truncatum HOM05D006276 ORTHO05D007724 2.5e-72 276.9 330 46.4
GSVIVG01035412001 Vitis vinifera HOM05D006276 ORTHO05D007724 2.5e-72 276.9 330 46.4
PGSC0003DMG400025517 Solanum tuberosum HOM05D006276 ORTHO05D007724 7.2e-72 275.4 323 45.5
Dinv27981 Davidia involucrata HOM05D006276 ORTHO05D007724 9.4e-72 275.0 325 46.5
Glyma.17G229400 Glycine max HOM05D006276 ORTHO05D007724 1.6e-71 274.2 320 47.5
Peaxi162Scf00247g00720 Petunia axillaris HOM05D006276 ORTHO05D007724 1.6e-71 274.2 322 46.3
Solyc11g070020.3 Solanum lycopersicum HOM05D006276 ORTHO05D007724 1.6e-71 274.2 323 45.2
Phvul.001G034700 Phaseolus vulgaris HOM05D006276 ORTHO05D007724 2.1e-71 273.9 321 48.9
Sopen11g028700 Solanum pennellii HOM05D006276 ORTHO05D007724 2.1e-71 273.9 323 45.2
Duzib168G0463 Durio zibethinus HOM05D006276 ORTHO05D007724 2.7e-71 273.5 329 47.4
VMungo0647G0182 Vigna mungo HOM05D006276 ORTHO05D007724 4.7e-71 272.7 321 47.7
Gorai.009G045400 Gossypium raimondii HOM05D006276 ORTHO05D007724 6.1e-71 272.3 329 46.8
Cc08_g10550 Coffea canephora HOM05D006276 ORTHO05D007724 7.9e-71 271.9 321 46.7
CANSAT25G3436 Cannabis sativa HOM05D006276 ORTHO05D007724 1.4e-70 271.2 324 48.1
CiPaw.16G028900 Carya illinoinensis HOM05D006276 ORTHO05D007724 1.4e-70 271.2 330 47.9
TAR626G0576 Trochodendron aralioides HOM05D006276 ORTHO05D007724 3.0e-70 270.0 331 43.2
Nitab4.5_0003550g0010 Nicotiana tabacum HOM05D006276 ORTHO05D007724 2.6e-69 266.9 323 45.2
Lj7A273T8 Lonicera japonica HOM05D006276 ORTHO05D007724 4.4e-69 266.2 322 45.3
PSO210G2260 Papaver somniferum HOM05D006276 ORTHO05D007724 5.7e-69 265.8 327 44.0
Lsat_1_v5_gn_3_24381 Lactuca sativa HOM05D006276 ORTHO05D007724 9.7e-69 265.0 325 48.3
TAR383G0425 Trochodendron aralioides HOM05D006276 ORTHO05D007724 2.8e-68 263.5 328 43.3
CsaV3_2G025580 Cucumis sativus L. HOM05D006276 ORTHO05D007724 3.7e-68 263.1 328 45.7
Nitab4.5_0001107g0140 Nicotiana tabacum HOM05D006276 ORTHO05D007724 3.7e-68 263.1 323 44.6
Actinidia01190 Actinidia chinensis HOM05D006276 ORTHO05D007724 2.4e-67 260.4 327 44.3
Medtr1g016410 Medicago truncatula HOM05D006276 ORTHO05D007724 2.4e-67 260.4 327 46.8
arahy.Tifrunner.gnm1.ann1.C6FL8N Arachis hypogaea HOM05D006276 ORTHO05D007724 9.1e-67 258.5 328 47.0
arahy.Tifrunner.gnm1.ann1.PS3ZFP Arachis hypogaea HOM05D006276 ORTHO05D007724 9.1e-67 258.5 328 47.3
DCAR_004430 Daucus carota HOM05D006276 ORTHO05D007724 9.1e-67 258.5 326 43.9
Lj5g0000642 Lotus japonicus HOM05D006276 ORTHO05D007724 1.2e-66 258.1 320 45.6
ClCG08G017020 Citrullus lanatus HOM05D006276 ORTHO05D007724 1.6e-66 257.7 328 45.7
PSO210G3453 Papaver somniferum HOM05D006276 ORTHO05D007724 7.7e-66 255.4 329 43.2
Sed0014483 Sechium edule HOM05D006276 ORTHO05D007724 7.7e-66 255.4 330 44.5
FAN24G2654 Fragaria x ananassa HOM05D006276 ORTHO05D007724 1.0e-65 255.0 312 48.4
Sed0008348 Sechium edule HOM05D006276 ORTHO05D007724 1.7e-65 254.2 326 44.2
SalBow1G4959 Salvia bowleyana HOM05D006276 ORTHO05D007724 6.5e-65 252.3 333 44.1
TPR.G13142 Trifolium pratense HOM05D006276 ORTHO05D007724 1.1e-64 251.5 326 45.7
Aqoxy5G01259 Aquilegia oxysepala HOM05D006276 ORTHO05D007724 3.2e-64 250.0 328 42.7
Migut.E01562 Erythranthe guttata HOM05D006276 ORTHO05D007724 3.2e-64 250.0 322 42.9
Ca_13170_v3 Cicer arietinum L. HOM05D006276 ORTHO05D007724 5.5e-64 249.2 327 45.0
Actinidia14712 Actinidia chinensis HOM05D006276 ORTHO05D007724 7.2e-64 248.8 323 44.6
Actinidia18190 Actinidia chinensis HOM05D006276 ORTHO05D007724 7.2e-64 248.8 322 44.7
FAN15G3491 Fragaria x ananassa HOM05D006276 ORTHO05D007724 1.6e-63 247.7 312 46.5
SGA_v2.0_scaffold169G38688 Striga asiatica HOM05D006276 ORTHO05D007724 2.1e-63 247.3 321 42.4
MSTRG.11659 Avicennia marina HOM05D006276 ORTHO05D007724 6.1e-63 245.7 321 42.7
HanXRQChr17g0538201 Helianthus annuus HOM05D006276 ORTHO05D007724 6.1e-63 245.7 323 44.0
Hund19457 Selenicereus undatus HOM05D006276 ORTHO05D007724 1.5e-61 241.1 322 43.2
Lalb_Chr14g0367711 Lupinus albus HOM05D006276 ORTHO05D007724 5.7e-61 239.2 332 43.7
Gohir.D05G044300 Gossypium hirsutum HOM05D006276 ORTHO05D007724 7.5e-61 238.8 326 43.6
Oeu003983.2 Olea europaea HOM05D006276 ORTHO05D007724 9.1e-59 231.9 322 41.3
PSO478G1664 Papaver somniferum HOM05D006276 ORTHO05D007724 1.6e-58 231.1 329 41.0
Sc09g0009760 Simmondsia chinensis HOM05D006276 ORTHO05D007724 2.7e-58 230.3 312 42.0
Haze_18196 Corylus avellana HOM05D006276 ORTHO05D007724 1.0e-57 228.4 329 42.9
EL10Ac2g03891 Beta vulgaris HOM05D006276 ORTHO05D007724 2.2e-57 227.3 320 40.6
SHI18737 Sapria himalayana HOM05D006276 ORTHO05D007724 5.5e-56 222.6 321 41.1
AUR62022071 Chenopodium quinoa HOM05D006276 ORTHO05D007724 2.7e-55 220.3 320 42.2
Prupe.1G412500 Prunus persica HOM05D006276 ORTHO05D007724 2.0e-53 214.2 281 45.6
PSO782G4309 Papaver somniferum HOM05D006276 ORTHO05D007724 3.4e-53 213.4 316 41.5
Gohir.A05G042600 Gossypium hirsutum HOM05D006276 ORTHO05D007724 1.4e-51 208.0 283 43.5
vmacro14246 Vaccinium macrocarpon HOM05D006276 ORTHO05D007724 1.8e-51 207.6 270 44.8
Cpa.g.sc7.176 Carica papaya HOM05D006276 ORTHO05D007724 5.4e-51 206.1 214 53.3
MELO3C010755.2 Cucumis melo HOM05D006276 ORTHO05D007724 7.7e-50 202.2 320 42.5
FAN20G3006 Fragaria x ananassa HOM05D006276 ORTHO05D007724 7.7e-50 202.2 312 41.3
CSS0027263 Camellia sinensis var. sinensis HOM05D006276 ORTHO05D007724 1.3e-49 201.4 263 43.7
AUR62009155 Chenopodium quinoa HOM05D006276 ORTHO05D007724 1.3e-49 201.4 344 38.7
HPP92_004831 Vanilla planifolia HOM05D006276 ORTHO05D007724 5.0e-49 199.5 331 39.6
Cfa017950 Carpinus fangiana HOM05D006276 ORTHO05D007724 6.5e-49 199.1 229 46.3
PGR044G2277 Punica granatum HOM05D006276 ORTHO05D007724 7.2e-48 195.7 314 42.0
CDE06G0120 Ceratophyllum demersum HOM05D006276 ORTHO05D007724 9.5e-48 195.3 336 38.4
ATR0564G292 Amborella trichopoda HOM05D006276 ORTHO05D007724 1.4e-46 191.4 322 37.3
FAN27G2524 Fragaria x ananassa HOM05D006276 ORTHO05D007724 9.8e-45 185.3 242 45.9
Nn3g20166 Nelumbo nucifera HOM05D006276 ORTHO05D007724 9.8e-45 185.3 261 39.5
Glyma.14G094000 Glycine max HOM05D006276 ORTHO05D007724 2.8e-44 183.7 224 45.1
CiPaw.15G039400 Carya illinoinensis HOM05D006276 ORTHO05D007724 8.3e-44 182.2 327 36.1
SEGI_30057 Sequoiadendron giganteum HOM05D006276 ORTHO05D007724 1.1e-43 181.8 330 35.5
Zm00001eb231620 Zea mays HOM05D006276 ORTHO05D007724 1.7e-41 174.5 341 35.8
Os02g0135600 Oryza sativa ssp. japonica HOM05D006276 ORTHO05D007724 2.3e-41 174.1 346 35.0
unitig_26.g10141 Utricularia gibba HOM05D003606 ORTHO05D004650 5.6e-40 169.5 204 46.6
Mapoly0103s0015 Marchantia polymorpha HOM05D006276 ORTHO05D007724 2.0e-37 161.0 334 33.5
AagrBONN_evm.TU.Sc2ySwM_117.3789 Anthoceros agrestis HOM05D006276 ORTHO05D007724 2.7e-34 150.6 341 31.1
Psat6g020720 Pisum sativum HOM05D006276 ORTHO05D007724 6.0e-34 149.4 192 45.8
Lj7P276T14 Lonicera japonica HOM05D006276 ORTHO05D007724 3.0e-33 147.1 149 51.0
Pp3c1_29470 Physcomitrium patens HOM05D006276 ORTHO05D007724 3.0e-33 147.1 333 32.7
Pp3c14_20160 Physcomitrium patens HOM05D006276 ORTHO05D007724 8.6e-33 145.6 327 34.6
PSO210G7329 Papaver somniferum HOM05D006276 ORTHO05D007724 2.5e-32 144.1 230 40.4
Ah.10g034420 Amaranthus hybridus HOM05D006276 ORTHO05D007724 2.1e-31 141.0 313 31.3
CDE04G1132 Ceratophyllum demersum HOM05D000032 ORTHO05D002561 1.1e-30 138.7 267 35.6
Thecc.08G113900 Theobroma cacao HOM05D006276 ORTHO05D007724 1.7e-28 131.3 257 36.2
SMO117G0325 Selaginella moellendorffii HOM05D006276 ORTHO05D007724 3.9e-25 120.2 325 30.2
CARHR201360 Cardamine hirsuta HOM05D006276 ORTHO05D007724 9.5e-16 89.0 65 67.7
CSS0023315 Camellia sinensis var. sinensis HOM05D006276 ORTHO05D007724 2.2e-12 77.8 46 71.7
CSS0029180 Camellia sinensis var. sinensis HOM05D006276 ORTHO05D007724 2.2e-12 77.8 46 71.7
Lj7A276T16 Lonicera japonica HOM05D006276 ORTHO05D007724 3.5e-10 70.5 50 62.0
Oeu018645.1 Olea europaea HOM05D006276 ORTHO05D007724 2.4e-06 57.8 41 63.4


User provided reference genes

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