Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG3G15270 Aethionema arabicum HOM05D005314 ORTHO05D006522 9.8e-195 683.3 357 100.0
BraA10t44644Z Brassica rapa HOM05D005314 ORTHO05D006522 1.6e-181 639.4 357 93.3
AT5G11960 Arabidopsis thaliana HOM05D005314 ORTHO05D006522 7.1e-177 624.0 357 92.2
AL6G22740 Arabidopsis lyrata HOM05D005314 ORTHO05D006522 1.6e-176 622.9 357 92.2
A10p25800 Brassica napus HOM05D005314 ORTHO05D006522 7.8e-176 620.5 357 91.6
C09p64870 Brassica napus HOM05D005314 ORTHO05D006522 1.7e-175 619.4 357 91.6
Sp6g31630 Schrenkiella parvula HOM05D005314 ORTHO05D006522 3.9e-175 618.2 357 91.6
BolC9t59318H Brassica oleracea HOM05D005314 ORTHO05D006522 6.6e-175 617.5 357 91.3
Carub.0006s1050 Capsella rubella HOM05D005314 ORTHO05D006522 2.5e-174 615.5 357 91.0
Thhalv10014010m.g Eutrema salsugineum HOM05D005314 ORTHO05D006522 1.6e-173 612.8 357 91.0
BcaNung02637 Brassica carinata HOM05D005314 ORTHO05D006522 3.1e-172 608.6 357 90.2
A02p01290 Brassica napus HOM05D005314 ORTHO05D006522 8.9e-172 607.1 357 89.9
BraA02t05108Z Brassica rapa HOM05D005314 ORTHO05D006522 8.9e-172 607.1 357 89.9
BcaC03g13403 Brassica carinata HOM05D005314 ORTHO05D006522 2.6e-171 605.5 357 89.6
C02p05500 Brassica napus HOM05D005314 ORTHO05D006522 2.6e-171 605.5 357 89.6
BolC2t06496H Brassica oleracea HOM05D005314 ORTHO05D006522 2.6e-171 605.5 357 89.6
THA.LOC104811236 Tarenaya hassleriana HOM05D005314 ORTHO05D006522 3.2e-161 572.0 357 84.0
Thecc.09G057100 Theobroma cacao HOM05D005314 ORTHO05D006522 4.9e-146 521.5 355 76.3
Manes.03G050000 Manihot esculenta HOM05D005314 ORTHO05D006522 1.2e-144 516.9 355 75.8
QL02p000736 Quercus lobata HOM05D005314 ORTHO05D006522 1.6e-144 516.5 355 75.5
COL.COLO4_21084 Corchorus olitorius HOM05D005314 ORTHO05D006522 2.7e-144 515.8 355 76.6
Gorai.013G220600 Gossypium raimondii HOM05D005314 ORTHO05D006522 1.0e-143 513.8 355 75.5
Gohir.D13G194600 Gossypium hirsutum HOM05D005314 ORTHO05D006522 1.3e-143 513.5 355 75.5
Haze_18156 Corylus avellana HOM05D005314 ORTHO05D006522 8.7e-143 510.8 355 74.1
Cfa017974 Carpinus fangiana HOM05D005314 ORTHO05D006522 1.9e-142 509.6 355 73.8
CiPaw.15G037000 Carya illinoinensis HOM05D005314 ORTHO05D006522 1.9e-142 509.6 355 74.1
CANSAT25G2280 Cannabis sativa HOM05D005314 ORTHO05D006522 2.5e-142 509.2 357 75.1
Gohir.A13G187700 Gossypium hirsutum HOM05D005314 ORTHO05D006522 3.3e-142 508.8 355 75.2
RcHm_v2.0_Chr6g0311221 Rosa chinensis HOM05D005314 ORTHO05D006522 3.3e-142 508.8 355 73.8
Gorai.001G022500 Gossypium raimondii HOM05D005314 ORTHO05D006522 4.3e-142 508.4 355 74.4
Migut.A00114 Erythranthe guttata HOM05D005314 ORTHO05D006522 1.3e-141 506.9 357 73.4
Gohir.A07G021950 Gossypium hirsutum HOM05D005314 ORTHO05D006522 1.3e-141 506.9 355 73.8
Prupe.1G409300 Prunus persica HOM05D005314 ORTHO05D006522 2.1e-141 506.1 355 73.5
PGR044G2019 Punica granatum HOM05D005314 ORTHO05D006522 2.8e-141 505.8 356 74.4
TAR369G0158 Trochodendron aralioides HOM05D005314 ORTHO05D006522 3.7e-141 505.4 355 74.1
TAR636G1106 Trochodendron aralioides HOM05D005314 ORTHO05D006522 3.7e-141 505.4 355 74.1
FvH4_2g31600 Fragaria vesca HOM05D005314 ORTHO05D006522 8.1e-141 504.2 355 73.5
PSO210G6435 Papaver somniferum HOM05D005314 ORTHO05D006522 1.4e-140 503.4 356 73.3
Actinidia30326 Actinidia chinensis HOM05D005314 ORTHO05D006522 2.4e-140 502.7 356 74.4
PSO210G6321 Papaver somniferum HOM05D005314 ORTHO05D006522 9.0e-140 500.7 356 73.0
Eucgr.C03058 Eucalyptus grandis HOM05D005314 ORTHO05D006522 1.5e-139 500.0 355 74.6
Potri.018G060500 Populus trichocarpa HOM05D005314 ORTHO05D006522 4.5e-139 498.4 355 72.7
MSTRG.25961 Avicennia marina HOM05D005314 ORTHO05D006522 1.7e-138 496.5 355 72.1
MD15G1056700 Malus domestica HOM05D005314 ORTHO05D006522 2.2e-138 496.1 355 73.2
CSS0005464 Camellia sinensis var. sinensis HOM05D005314 ORTHO05D006522 6.5e-138 494.6 356 72.5
Potri.006G226000 Populus trichocarpa HOM05D005314 ORTHO05D006522 8.4e-138 494.2 355 72.4
CiPaw.16G027100 Carya illinoinensis HOM05D005314 ORTHO05D006522 1.1e-137 493.8 355 72.4
TWI32G0330 Tripterygium wilfordii HOM05D005314 ORTHO05D006522 1.9e-137 493.0 355 73.5
Dinv22878 Davidia involucrata HOM05D005314 ORTHO05D006522 3.2e-137 492.3 355 72.7
SalBow4G3021 Salvia bowleyana HOM05D005314 ORTHO05D006522 3.2e-137 492.3 355 71.0
CsaV3_4G035770 Cucumis sativus L. HOM05D005314 ORTHO05D006522 9.3e-137 490.7 353 71.7
TWI34G0632 Tripterygium wilfordii HOM05D005314 ORTHO05D006522 9.3e-137 490.7 355 72.7
ECA233G4949 Erigeron canadensis HOM05D005314 ORTHO05D006522 2.7e-136 489.2 357 73.7
CAN.G130.11 Capsicum annuum HOM05D005314 ORTHO05D006522 3.5e-136 488.8 355 71.0
MD08G1064900 Malus domestica HOM05D005314 ORTHO05D006522 3.5e-136 488.8 355 72.1
Cc08_g10890 Coffea canephora HOM05D005314 ORTHO05D006522 1.0e-135 487.3 355 71.0
Sed0001440 Sechium edule HOM05D005314 ORTHO05D006522 5.1e-135 485.0 353 70.8
Solyc06g036780.3 Solanum lycopersicum HOM05D005314 ORTHO05D006522 6.7e-135 484.6 355 70.1
SGA_v2.0_scaffold20G09204 Striga asiatica HOM05D005314 ORTHO05D006522 6.7e-135 484.6 392 66.8
ClCG05G017990 Citrullus lanatus HOM05D005314 ORTHO05D006522 8.7e-135 484.2 356 70.5
Rhsim11G0042200 Rhododendron simsii HOM05D005314 ORTHO05D006522 1.1e-134 483.8 367 70.6
Sopen06g012940 Solanum pennellii HOM05D005314 ORTHO05D006522 1.1e-134 483.8 355 69.9
Ca_13152_v3 Cicer arietinum L. HOM05D005314 ORTHO05D006522 4.3e-134 481.9 355 70.4
Aqoxy7G04033 Aquilegia oxysepala HOM05D000411 ORTHO05D006522 7.4e-134 481.1 349 70.8
Lsat_1_v5_gn_6_14601 Lactuca sativa HOM05D005314 ORTHO05D006522 7.4e-134 481.1 357 72.3
GSVIVG01035376001 Vitis vinifera HOM05D005314 ORTHO05D006522 7.4e-134 481.1 358 70.7
Nn8g38796 Nelumbo nucifera HOM05D005314 ORTHO05D006522 9.6e-134 480.7 355 71.0
AUR62009122 Chenopodium quinoa HOM05D005314 ORTHO05D006522 1.6e-133 479.9 355 69.9
FAN27G1630 Fragaria x ananassa HOM05D005314 ORTHO05D006522 1.4e-132 476.9 355 70.4
Glyma.14G097400 Glycine max HOM05D005314 ORTHO05D006522 5.3e-132 474.9 361 69.3
Phvul.001G037500 Phaseolus vulgaris HOM05D005314 ORTHO05D006522 9.0e-132 474.2 355 69.3
TPR.G13039 Trifolium pratense HOM05D005314 ORTHO05D006522 1.5e-131 473.4 357 70.0
Psat6g021480 Pisum sativum HOM05D005314 ORTHO05D006522 2.0e-131 473.0 357 70.0
Glyma.06G053100 Glycine max HOM05D005314 ORTHO05D006522 3.4e-131 472.2 355 69.3
Hma1.2p1_0544F.1_g175630 Hydrangea macrophylla HOM05D005314 ORTHO05D006522 3.4e-131 472.2 355 69.3
Medtr1g015820 Medicago truncatula HOM05D005314 ORTHO05D006522 5.9e-131 471.5 357 68.6
Lj1g0000731 Lotus japonicus HOM05D005314 ORTHO05D006522 7.6e-131 471.1 355 67.6
Ciclev10008891m.g Citrus clementina HOM05D005314 ORTHO05D006522 1.7e-130 469.9 347 72.3
Lalb_Chr11g0063171 Lupinus albus HOM05D005314 ORTHO05D006522 8.5e-130 467.6 355 68.5
VMungo0647G2045 Vigna mungo HOM05D005314 ORTHO05D006522 2.5e-129 466.1 368 67.1
Phvul.009G078900 Phaseolus vulgaris HOM05D005314 ORTHO05D006522 3.2e-129 465.7 348 67.2
ATR0789G137 Amborella trichopoda HOM05D005314 ORTHO05D006522 4.2e-129 465.3 355 68.5
MELO3C016882.2 Cucumis melo HOM05D005314 ORTHO05D006522 7.2e-129 464.5 353 69.4
Hund19438 Selenicereus undatus HOM05D005314 ORTHO05D006522 9.3e-129 464.2 355 69.9
HanXRQChr08g0226511 Helianthus annuus HOM05D005314 ORTHO05D006522 7.9e-128 461.1 355 70.7
Peaxi162Scf01088g00005 Petunia axillaris HOM05D005314 ORTHO05D006522 7.9e-128 461.1 337 70.6
CDE06G1634 Ceratophyllum demersum HOM05D005314 ORTHO05D006522 4.3e-126 455.3 355 68.7
Sabra18G0054400 Salix brachista HOM05D005314 ORTHO05D006522 2.8e-125 452.6 413 60.5
Atru.chr7.1939 Acer truncatum HOM05D005314 ORTHO05D006522 5.9e-123 444.9 284 80.6
Lalb_Chr22g0356141 Lupinus albus HOM05D005314 ORTHO05D006522 1.3e-122 443.7 320 69.7
VMungo1309G2963 Vigna mungo HOM05D005314 ORTHO05D006522 1.4e-121 440.3 348 65.5
FAN15G2750 Fragaria x ananassa HOM05D005314 ORTHO05D006522 3.2e-121 439.1 318 71.4
FAN24G2134 Fragaria x ananassa HOM05D005314 ORTHO05D006522 5.5e-121 438.3 318 71.4
DCAR_007733 Daucus carota HOM05D005314 ORTHO05D006522 3.9e-119 432.2 400 59.2
HPP92_007653 Vanilla planifolia HOM05D005314 ORTHO05D006522 1.5e-118 430.3 356 62.6
MBI01_g21122_MAGBIO Magnolia biondii HOM05D005314 ORTHO05D006522 8.2e-117 424.5 346 66.5
Lalb_Chr14g0366381 Lupinus albus HOM05D005314 ORTHO05D006522 6.9e-116 421.4 284 74.6
Glyma.04G052700 Glycine max HOM05D005314 ORTHO05D006522 1.0e-114 417.5 318 67.6
arahy.Tifrunner.gnm1.ann1.VQ1HGR Arachis hypogaea HOM05D005314 ORTHO05D006522 1.1e-113 414.1 355 64.2
Glyma.17G227100 Glycine max HOM05D005314 ORTHO05D006522 7.9e-112 407.9 355 62.3
Sc23g0005690 Simmondsia chinensis HOM05D005314 ORTHO05D006522 3.0e-111 406.0 355 63.4
Sabra06G0174700 Salix brachista HOM05D005314 ORTHO05D006522 1.3e-109 400.6 416 54.6
Oeu003996.1 Olea europaea HOM05D005314 ORTHO05D006522 9.1e-108 394.4 315 68.9
Lj8A530G14 Lonicera japonica HOM05D005314 ORTHO05D006522 1.0e-106 391.0 305 68.2
arahy.Tifrunner.gnm1.ann1.UTD444 Arachis hypogaea HOM05D005314 ORTHO05D006522 1.9e-105 386.7 355 60.8
arahy.Tifrunner.gnm1.ann1.GAY7D4 Arachis hypogaea HOM05D005314 ORTHO05D006522 1.5e-102 377.1 355 59.2
vmacro00123 Vaccinium macrocarpon HOM05D005314 ORTHO05D006522 2.6e-102 376.3 293 68.6
Duzib150G1607 Durio zibethinus HOM05D005314 ORTHO05D006522 1.1e-100 370.9 234 81.6
CARHR201170 Cardamine hirsuta HOM05D005314 ORTHO05D006522 6.1e-96 355.1 202 91.1
unitig_88.g27677 Utricularia gibba HOM05D005314 ORTHO05D006522 1.4e-95 354.0 384 52.6
Dinv28005 Davidia involucrata HOM05D005314 ORTHO05D006522 5.7e-94 348.6 234 76.1
EL10Ac2g03829 Beta vulgaris HOM05D005314 ORTHO05D006522 7.0e-92 341.7 355 55.5
arahy.Tifrunner.gnm1.ann1.6D5JL1 Arachis hypogaea HOM05D005314 ORTHO05D006522 8.8e-87 324.7 355 53.5
Nitab4.5_0000972g0030 Nicotiana tabacum HOM05D005314 ORTHO05D006522 1.2e-86 324.3 433 48.0
Gohir.D07G021900 Gossypium hirsutum HOM05D005314 ORTHO05D006522 3.4e-86 322.8 216 78.7
Sed0024799 Sechium edule HOM05D005314 ORTHO05D006522 5.7e-86 322.0 258 66.7
Mapoly0049s0128 Marchantia polymorpha HOM05D005314 ORTHO05D006522 1.0e-79 301.2 343 50.4
Nitab4.5_0000268g0140 Nicotiana tabacum HOM05D005314 ORTHO05D006522 1.4e-79 300.8 355 47.9
Ah.10g034130 Amaranthus hybridus HOM05D005314 ORTHO05D006522 2.5e-73 280.0 261 57.5
MD11G1243300 Malus domestica HOM05D005314 ORTHO05D006522 5.2e-71 272.3 181 76.2
Zm00001eb155260 Zea mays HOM05D005314 ORTHO05D006522 1.1e-68 264.6 259 56.0
Pp3c7_50 Physcomitrium patens HOM05D005314 ORTHO05D006522 1.4e-68 264.2 275 51.6
Cpa.g.sc7.160 Carica papaya HOM05D005314 ORTHO05D006522 1.0e-58 231.5 147 82.3
Hund03325 Selenicereus undatus HOM05D005314 ORTHO05D006522 3.0e-58 229.9 267 50.9
Cpa.g.sc7.159 Carica papaya HOM05D005314 ORTHO05D006522 5.2e-55 219.2 163 73.0
Os01g0708300 Oryza sativa ssp. japonica HOM05D005314 ORTHO05D006522 3.2e-52 209.9 146 71.9
Lj7A260G18 Lonicera japonica HOM05D005314 ORTHO05D006522 6.9e-47 192.2 243 47.3
CBR_g50008 Chara braunii HOM05D005314 ORTHO05D006522 4.4e-46 189.5 349 37.8
RcHm_v2.0_Chr1g0383701 Rosa chinensis HOM05D005314 ORTHO05D006522 4.9e-45 186.0 166 57.8
AUR62039137 Chenopodium quinoa HOM05D005314 ORTHO05D006522 3.5e-43 179.9 131 71.8
arahy.Tifrunner.gnm1.ann1.IMU44M Arachis hypogaea HOM05D005314 ORTHO05D006522 1.5e-41 174.5 180 55.6
CSS0003098 Camellia sinensis var. sinensis HOM05D005314 ORTHO05D006522 7.3e-41 172.2 107 78.5
Cre10.g419700 Chlamydomonas reinhardtii HOM05D005314 ORTHO05D006522 2.8e-40 170.2 342 33.9
MCO12G408 Micromonas commoda HOM05D005314 ORTHO05D006522 3.1e-39 166.8 312 35.6
PRCOL_00001271 Prasinoderma coloniale HOM05D005314 ORTHO05D006522 5.3e-39 166.0 327 36.1
BcaB03g16563 Brassica carinata HOM05D005314 ORTHO05D006522 7.9e-35 152.1 113 73.5
PGSC0003DMG400031356 Solanum tuberosum HOM05D005314 ORTHO05D006522 2.3e-34 150.6 130 60.8
Oeu040341.1 Olea europaea HOM05D005314 ORTHO05D006522 5.1e-26 122.9 74 83.8
Gohir.D07G021800 Gossypium hirsutum HOM05D005314 ORTHO05D006522 1.4e-20 104.8 93 57.0
SEGI_34785 Sequoiadendron giganteum HOM05D005314 ORTHO05D006522 3.2e-20 103.6 73 69.9
arahy.Tifrunner.gnm1.ann1.TY68CU Arachis hypogaea HOM05D005314 ORTHO05D005864 6.0e-19 99.4 104 54.8
CSS0034519 Camellia sinensis var. sinensis HOM05D005314 ORTHO05D006522 5.7e-17 92.8 95 55.8


User provided reference genes

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