Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG3G14570 Aethionema arabicum HOM05D005688 ORTHO05D006630 9.7e-203 709.9 353 100.0
CARHR200370 Cardamine hirsuta HOM05D005688 ORTHO05D006630 4.4e-187 657.9 355 92.4
AL6G23700 Arabidopsis lyrata HOM05D005688 ORTHO05D006630 3.1e-185 651.7 355 91.8
AT5G13100 Arabidopsis thaliana HOM05D005688 ORTHO05D006630 7.7e-184 647.1 355 91.0
Carub.0006s1127 Capsella rubella HOM05D005688 ORTHO05D006630 1.5e-182 642.9 354 90.7
Sp6g30880 Schrenkiella parvula HOM05D005688 ORTHO05D006630 2.5e-182 642.1 358 90.5
Thhalv10013944m.g Eutrema salsugineum HOM05D005688 ORTHO05D006630 5.5e-182 641.0 357 90.8
BraA03t09920Z Brassica rapa HOM05D000918 ORTHO05D006630 1.2e-173 613.2 356 86.5
C03p06760 Brassica napus HOM05D000918 ORTHO05D006630 2.7e-173 612.1 356 86.5
BolC3t13183H Brassica oleracea HOM05D000918 ORTHO05D006630 2.7e-173 612.1 356 86.5
C09p63990 Brassica napus HOM05D000918 ORTHO05D006630 4.0e-172 608.2 348 86.2
BraA10t44572Z Brassica rapa HOM05D005688 ORTHO05D006630 4.0e-172 608.2 355 85.1
A03p05810 Brassica napus HOM05D000918 ORTHO05D000791 8.8e-172 607.1 356 85.7
BolC9t59237H Brassica oleracea HOM05D005688 ORTHO05D006630 3.4e-171 605.1 354 85.9
A10p25100 Brassica napus HOM05D000918 ORTHO05D006630 1.3e-170 603.2 348 85.1
BcaB01g05377 Brassica carinata HOM05D005688 ORTHO05D006630 1.7e-162 576.2 357 82.4
THA.LOC104810209 Tarenaya hassleriana HOM05D005688 ORTHO05D006630 5.0e-159 564.7 357 80.7
Manes.12G008200 Manihot esculenta HOM05D005688 ORTHO05D006630 2.1e-149 532.7 364 73.6
TWI75G1512 Tripterygium wilfordii HOM05D005688 ORTHO05D006630 3.1e-148 528.9 357 76.5
Ciclev10032000m.g Citrus clementina HOM05D005688 ORTHO05D006630 5.2e-148 528.1 357 73.9
Cfa009390 Carpinus fangiana HOM05D005688 ORTHO05D006630 2.0e-147 526.2 356 74.4
Haze_12451 Corylus avellana HOM05D005688 ORTHO05D006630 4.4e-147 525.0 361 73.4
RcHm_v2.0_Chr4g0429761 Rosa chinensis HOM05D005688 ORTHO05D006630 2.4e-145 519.2 358 72.9
Potri.003G168300 Populus trichocarpa HOM05D005688 ORTHO05D006630 3.2e-145 518.8 359 73.0
FvH4_4g23370 Fragaria vesca HOM05D005688 ORTHO05D006630 5.4e-145 518.1 366 71.6
FAN12G1631 Fragaria x ananassa HOM05D005688 ORTHO05D006630 5.4e-145 518.1 366 71.6
MD16G1123300 Malus domestica HOM05D005688 ORTHO05D006630 7.0e-145 517.7 370 72.4
TWI36G1544 Tripterygium wilfordii HOM05D005688 ORTHO05D006630 1.2e-144 516.9 357 75.1
FAN07G0693 Fragaria x ananassa HOM05D005688 ORTHO05D006630 1.6e-144 516.5 357 72.3
FAN17G3098 Fragaria x ananassa HOM05D005688 ORTHO05D006630 1.6e-144 516.5 357 72.3
Gohir.A04G100300 Gossypium hirsutum HOM05D005688 ORTHO05D006630 2.0e-144 516.2 355 72.7
Gohir.D04G139300 Gossypium hirsutum HOM05D005688 ORTHO05D006630 2.7e-144 515.8 355 73.0
Prupe.1G222300 Prunus persica HOM05D005688 ORTHO05D006630 2.7e-144 515.8 371 71.4
Thecc.02G201300 Theobroma cacao HOM05D005688 ORTHO05D006630 3.5e-144 515.4 357 72.8
Gorai.012G124400 Gossypium raimondii HOM05D005688 ORTHO05D006630 6.0e-144 514.6 355 73.0
CiPaw.05G106800 Carya illinoinensis HOM05D005688 ORTHO05D006630 7.8e-144 514.2 360 72.5
Duzib251G0174 Durio zibethinus HOM05D005688 ORTHO05D006630 1.0e-143 513.8 356 72.8
CsaV3_4G002970 Cucumis sativus L. HOM05D005688 ORTHO05D006630 6.6e-143 511.1 367 72.2
Phvul.008G017000 Phaseolus vulgaris HOM05D005688 ORTHO05D006630 8.6e-143 510.8 367 71.9
Ca_07133_v3 Cicer arietinum L. HOM05D005688 ORTHO05D006630 1.5e-142 510.0 370 71.6
Ca_28122_v3 Cicer arietinum L. HOM05D005688 ORTHO05D006630 1.5e-142 510.0 370 71.6
MELO3C017746.2 Cucumis melo HOM05D005688 ORTHO05D006630 1.5e-142 510.0 367 72.2
Glyma.18G284500 Glycine max HOM05D005688 ORTHO05D006630 2.5e-142 509.2 366 71.9
Nitab4.5_0002277g0010 Nicotiana tabacum HOM05D005688 ORTHO05D006630 9.5e-142 507.3 354 72.0
Glyma.02G097000 Glycine max HOM05D005688 ORTHO05D006630 1.6e-141 506.5 368 70.9
arahy.Tifrunner.gnm1.ann1.97E8EB Arachis hypogaea HOM05D005688 ORTHO05D006630 2.1e-141 506.1 381 69.6
arahy.Tifrunner.gnm1.ann1.N9VQT0 Arachis hypogaea HOM05D005688 ORTHO05D006630 2.1e-141 506.1 381 69.6
CANSAT80G0816 Cannabis sativa HOM05D005688 ORTHO05D006630 2.1e-141 506.1 362 73.2
Medtr7g022390 Medicago truncatula HOM05D005688 ORTHO05D006630 8.1e-141 504.2 366 71.0
Nitab4.5_0000251g0050 Nicotiana tabacum HOM05D005688 ORTHO05D006630 3.1e-140 502.3 355 71.0
QL03p051598 Quercus lobata HOM05D005688 ORTHO05D006630 3.1e-140 502.3 363 69.4
Potri.001G059700 Populus trichocarpa HOM05D005688 ORTHO05D006630 6.8e-140 501.1 358 70.1
Lj6A830T28 Lonicera japonica HOM05D005688 ORTHO05D006630 2.6e-139 499.2 353 71.1
COL.COLO4_27347 Corchorus olitorius HOM05D005688 ORTHO05D006630 4.4e-139 498.4 361 72.3
Sed0014060 Sechium edule HOM05D005688 ORTHO05D006630 5.8e-139 498.0 367 71.1
Hma1.2p1_0065F.1_g035040 Hydrangea macrophylla HOM05D005688 ORTHO05D006630 7.5e-139 497.7 361 69.5
Lalb_Chr10g0092021 Lupinus albus HOM05D005688 ORTHO05D006630 7.5e-139 497.7 367 70.0
Lj1g0000862 Lotus japonicus HOM05D005688 ORTHO05D006630 1.3e-138 496.9 378 68.0
Dinv17591 Davidia involucrata HOM05D005688 ORTHO05D006630 2.9e-138 495.7 356 70.2
Duzib248G1308 Durio zibethinus HOM05D005688 ORTHO05D006630 3.7e-138 495.4 358 70.9
Dinv11693 Davidia involucrata HOM05D005688 ORTHO05D006630 4.1e-137 491.9 357 69.5
CSS0038243 Camellia sinensis var. sinensis HOM05D005688 ORTHO05D006630 1.6e-136 490.0 358 69.0
Lalb_Chr17g0336391 Lupinus albus HOM05D005688 ORTHO05D006630 2.1e-136 489.6 366 68.9
TPR.G2946 Trifolium pratense HOM05D005688 ORTHO05D006630 3.5e-136 488.8 348 71.8
CSS0036763 Camellia sinensis var. sinensis HOM05D005688 ORTHO05D006630 6.0e-136 488.0 358 69.6
Lsat_1_v5_gn_4_280 Lactuca sativa HOM05D005688 ORTHO05D006630 3.0e-135 485.7 365 68.2
Solyc05g015980.3 Solanum lycopersicum HOM05D005688 ORTHO05D006630 3.9e-135 485.3 354 69.5
Sopen05g011970 Solanum pennellii HOM05D005688 ORTHO05D006630 6.6e-135 484.6 354 69.5
TAR629G3099 Trochodendron aralioides HOM05D005688 ORTHO05D006630 1.1e-134 483.8 357 67.2
PGSC0003DMG400010801 Solanum tuberosum HOM05D005688 ORTHO05D006630 4.3e-134 481.9 354 68.9
Actinidia09624 Actinidia chinensis HOM05D005688 ORTHO05D006630 1.2e-133 480.3 355 67.9
Sabra03G0123400 Salix brachista HOM05D005688 ORTHO05D006630 2.1e-133 479.6 441 59.0
PGR102G0765 Punica granatum HOM05D005688 ORTHO05D006630 2.3e-132 476.1 358 68.2
Eucgr.B03525 Eucalyptus grandis HOM05D005688 ORTHO05D006630 6.8e-132 474.6 362 68.5
ECA234G1377 Erigeron canadensis HOM05D005688 ORTHO05D006630 1.2e-131 473.8 356 66.6
HanXRQChr17g0568911 Helianthus annuus HOM05D005688 ORTHO05D006630 3.4e-131 472.2 354 66.7
Sc04g0010310 Simmondsia chinensis HOM05D005688 ORTHO05D006630 1.3e-130 470.3 358 67.3
Rhsim12G0023600 Rhododendron simsii HOM05D005688 ORTHO05D006630 1.1e-129 467.2 367 65.1
Peaxi162Scf00128g01523 Petunia axillaris HOM05D005688 ORTHO05D006630 1.9e-129 466.5 355 66.2
vmacro01046 Vaccinium macrocarpon HOM05D005688 ORTHO05D006630 7.1e-129 464.5 382 62.8
Migut.E00005 Erythranthe guttata HOM05D005688 ORTHO05D006630 1.2e-128 463.8 355 67.3
DCAR_024659 Daucus carota HOM05D005688 ORTHO05D006630 2.7e-128 462.6 353 64.3
MSTRG.481 Avicennia marina HOM05D005688 ORTHO05D006630 4.6e-128 461.8 350 66.3
Actinidia39795 Actinidia chinensis HOM05D005688 ORTHO05D006630 1.0e-127 460.7 313 72.2
ClCG07G015390 Citrullus lanatus HOM05D005688 ORTHO05D006630 1.0e-127 460.7 336 72.0
SalBow2G0527 Salvia bowleyana HOM05D005688 ORTHO05D006630 5.1e-127 458.4 350 66.0
Psat3g187080 Pisum sativum HOM05D005688 ORTHO05D006630 6.6e-127 458.0 331 72.5
TAR371G0171 Trochodendron aralioides HOM05D005688 ORTHO05D006630 8.6e-127 457.6 356 65.4
BcaC04g19152 Brassica carinata HOM05D005688 ORTHO05D006630 3.3e-126 455.7 353 69.7
Aqoxy3G01629 Aquilegia oxysepala HOM05D005688 ORTHO05D006630 3.6e-125 452.2 358 62.6
unitig_26.g10416 Utricularia gibba HOM05D005688 ORTHO05D006630 1.1e-124 450.7 355 66.2
Hund06107 Selenicereus undatus HOM05D005688 ORTHO05D006630 1.4e-124 450.3 357 63.9
Nn3g16394 Nelumbo nucifera HOM05D005688 ORTHO05D006630 3.1e-124 449.1 357 63.0
Sed0011472 Sechium edule HOM05D005688 ORTHO05D006630 2.6e-123 446.0 336 67.6
Sabra01G0042800 Salix brachista HOM05D005688 ORTHO05D006630 1.1e-121 440.7 327 69.7
MBI07_g18747_MAGBIO Magnolia biondii HOM05D005688 ORTHO05D006630 7.1e-121 438.0 357 63.0
AUR62028899 Chenopodium quinoa HOM05D005688 ORTHO05D006630 3.9e-119 432.2 361 62.0
CAN.G163.3 Capsicum annuum HOM05D005688 ORTHO05D006630 6.6e-119 431.4 324 67.3
EL10Ac6g13540 Beta vulgaris HOM05D005688 ORTHO05D006630 8.7e-119 431.0 364 61.3
PSO017G1106 Papaver somniferum HOM05D005688 ORTHO05D006630 3.1e-116 422.5 366 61.7
PSO478G0501 Papaver somniferum HOM05D005688 ORTHO05D006630 2.0e-115 419.9 362 60.5
Ah.03g135940 Amaranthus hybridus HOM05D005688 ORTHO05D006630 3.4e-115 419.1 370 59.5
ATR0582G145 Amborella trichopoda HOM05D005688 ORTHO05D006630 4.5e-115 418.7 353 58.9
CDE05G3530 Ceratophyllum demersum HOM05D005688 ORTHO05D006630 6.4e-114 414.8 356 60.4
Atru.chr11.2370 Acer truncatum HOM05D005688 ORTHO05D006630 4.2e-113 412.1 289 75.4
CDE05G2516 Ceratophyllum demersum HOM05D005688 ORTHO05D006630 4.6e-112 408.7 356 59.8
CiPaw.06G105500 Carya illinoinensis HOM05D005688 ORTHO05D006630 3.0e-111 406.0 291 71.8
Manes.13G008600 Manihot esculenta HOM05D005688 ORTHO05D006630 2.5e-110 402.9 293 73.7
Zm00001eb127020 Zea mays HOM05D005688 ORTHO05D006630 2.6e-107 392.9 356 57.3
Os01g0102500 Oryza sativa ssp. japonica HOM05D005688 ORTHO05D006630 3.4e-107 392.5 297 64.0
SEGI_28374 Sequoiadendron giganteum HOM05D005688 ORTHO05D006630 4.5e-107 392.1 297 63.6
SEGI_34677 Sequoiadendron giganteum HOM05D005688 ORTHO05D006630 2.7e-104 382.9 295 63.1
Ah.02g130750 Amaranthus hybridus HOM05D005688 ORTHO05D006630 7.4e-102 374.8 357 55.5
HPP92_011533 Vanilla planifolia HOM05D005688 ORTHO05D006630 8.2e-101 371.3 326 59.2
ATR0579G080 Amborella trichopoda HOM05D005688 ORTHO05D006630 1.3e-95 354.0 300 59.3
HPP92_011539 Vanilla planifolia HOM05D005688 ORTHO05D006630 2.3e-95 353.2 356 53.1
AUR62005654 Chenopodium quinoa HOM05D005688 ORTHO05D006630 1.9e-94 350.1 228 74.6
Cpa.g.sc99.54 Carica papaya HOM05D005688 ORTHO05D006630 2.5e-94 349.7 194 85.6
CBR_g40425 Chara braunii HOM05D005688 ORTHO05D006630 9.6e-94 347.8 286 60.5
SMO367G0614 Selaginella moellendorffii HOM05D005688 ORTHO05D006630 1.6e-93 347.1 296 55.7
MBI04_g07882_MAGBIO Magnolia biondii HOM05D005688 ORTHO05D006630 2.1e-93 346.7 296 56.4
AagrBONN_evm.TU.Sc2ySwM_340.298 Anthoceros agrestis HOM05D005688 ORTHO05D006630 3.7e-93 345.9 302 56.3
Mapoly0015s0197 Marchantia polymorpha HOM05D005688 ORTHO05D006630 4.8e-93 345.5 337 54.0
Cc11_g17240 Coffea canephora HOM05D005688 ORTHO05D006630 5.0e-90 335.5 194 80.9
GSVIVG01000906001 Vitis vinifera HOM05D005688 ORTHO05D006630 3.0e-87 326.2 194 78.4
unitig_8.g2899 Utricularia gibba HOM05D005688 ORTHO05D006630 2.7e-64 250.0 153 76.5
Actinidia30626 Actinidia chinensis HOM05D001095 ORTHO05D000976 1.2e-56 224.6 210 55.2
Actinidia08051 Actinidia chinensis HOM05D005688 ORTHO05D006630 4.0e-55 219.5 126 80.2
Oeu012651.1 Olea europaea HOM05D005688 ORTHO05D006630 2.8e-53 213.4 207 56.5
Nn4g22254 Nelumbo nucifera HOM05D005688 ORTHO05D006630 3.7e-45 186.4 100 85.0
unitig_8.g2900 Utricularia gibba HOM05D005688 ORTHO05D006630 2.4e-44 183.7 186 54.8
Cpa.g.sc99.53 Carica papaya HOM05D005688 ORTHO05D006630 1.5e-41 174.5 143 69.2
Actinidia34019 Actinidia chinensis HOM05D005688 ORTHO05D006630 2.1e-40 170.6 93 81.7
Aqoxy1G03766 Aquilegia oxysepala HOM05D005688 ORTHO05D006630 2.9e-29 133.7 143 48.3
Actinidia08052 Actinidia chinensis HOM05D005688 ORTHO05D006630 3.7e-29 133.3 164 50.0
GSVIVG01010535001 Vitis vinifera HOM05D005688 ORTHO05D006630 6.4e-29 132.5 101 67.3
BcaB03g14943 Brassica carinata HOM05D005688 ORTHO05D006630 1.4e-28 131.3 73 82.2
VMungo1215G2942 Vigna mungo HOM05D005688 ORTHO05D006630 1.9e-28 131.0 88 70.5
VMungo1383G3355 Vigna mungo HOM05D005688 ORTHO05D006630 1.9e-28 131.0 237 41.4
BcaB07g33260 Brassica carinata HOM05D005688 ORTHO05D006630 2.4e-28 130.6 73 82.2
Ah.02g130760 Amaranthus hybridus HOM05D005688 ORTHO05D006630 1.3e-13 81.6 129 40.3
QL06p005212 Quercus lobata HOM05D005688 ORTHO05D006630 5.4e-12 76.3 42 78.6


User provided reference genes

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