Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG3G14350 Aethionema arabicum HOM05D003379 ORTHO05D003862 7.7e-212 740.3 407 100.0
CARHR200130 Cardamine hirsuta HOM05D003379 ORTHO05D003862 3.5e-95 352.8 419 58.5
Carub.0006s1148 Capsella rubella HOM05D003379 ORTHO05D003862 4.7e-92 342.4 423 56.5
Thhalv10013755m.g Eutrema salsugineum HOM05D003379 ORTHO05D003862 6.1e-92 342.0 415 56.4
AL6G23930 Arabidopsis lyrata HOM05D003379 ORTHO05D003862 8.0e-92 341.7 420 57.1
Sp6g30680 Schrenkiella parvula HOM05D003379 ORTHO05D003862 3.0e-91 339.7 414 56.5
THA.LOC104825281 Tarenaya hassleriana HOM05D003379 ORTHO05D003862 5.5e-85 318.9 437 52.4
AT5G13310 Arabidopsis thaliana HOM05D003379 ORTHO05D003862 2.7e-84 316.6 417 54.2
BcaC04g19123 Brassica carinata HOM05D003379 ORTHO05D003862 1.4e-83 314.3 416 53.1
BraA10t44552Z Brassica rapa HOM05D003379 ORTHO05D003862 1.6e-79 300.8 413 51.3
C09p63750 Brassica napus HOM05D003379 ORTHO05D003862 2.7e-79 300.1 358 56.7
THA.LOC104825464 Tarenaya hassleriana HOM05D003379 ORTHO05D003862 1.2e-76 291.2 435 49.4
A10p24890 Brassica napus HOM05D003379 ORTHO05D003862 2.6e-74 283.5 359 55.2
BcaNung03374 Brassica carinata HOM05D003379 ORTHO05D003862 1.9e-45 187.6 181 61.9
QL03p049546 Quercus lobata HOM05D003379 ORTHO05D003862 3.3e-45 186.8 443 38.6
Atru.chr12.1405 Acer truncatum HOM05D003379 ORTHO05D003862 3.6e-44 183.3 437 39.1
CiPaw.06G109000 Carya illinoinensis HOM05D003379 ORTHO05D003862 6.2e-44 182.6 450 39.1
Dinv01473 Davidia involucrata HOM05D003379 ORTHO05D003862 1.1e-43 181.8 448 38.4
Haze_12496 Corylus avellana HOM05D003379 ORTHO05D003862 8.9e-43 178.7 445 39.3
Ciclev10005064m.g Citrus clementina HOM05D003379 ORTHO05D003862 2.0e-42 177.6 421 37.5
Manes.08G101800 Manihot esculenta HOM05D003379 ORTHO05D003862 3.4e-42 176.8 456 38.6
TAR475G0001 Trochodendron aralioides HOM05D003379 ORTHO05D003862 9.9e-42 175.3 442 37.1
Dinv19304 Davidia involucrata HOM05D003379 ORTHO05D003862 2.2e-41 174.1 457 37.6
BcaC04g20129 Brassica carinata HOM05D003379 ORTHO05D003862 4.2e-40 169.9 182 57.7
COL.COLO4_21771 Corchorus olitorius HOM05D003379 ORTHO05D003862 1.3e-38 164.9 435 34.9
Ah.09g236390 Amaranthus hybridus HOM05D003379 ORTHO05D003862 1.7e-38 164.5 461 38.0
Sabra03G0118600 Salix brachista HOM05D003379 ORTHO05D003862 3.9e-38 163.3 440 37.0
RcHm_v2.0_Chr4g0428951 Rosa chinensis HOM05D003379 ORTHO05D003862 9.6e-37 158.7 420 37.6
CSS0045312 Camellia sinensis var. sinensis HOM05D003379 ORTHO05D003862 1.6e-36 157.9 381 36.5
Duzib132G1102 Durio zibethinus HOM05D003379 ORTHO05D003862 2.1e-36 157.5 433 35.1
Potri.003G163100 Populus trichocarpa HOM05D003379 ORTHO05D003862 2.1e-36 157.5 441 36.7
C07p23110 Brassica napus HOM05D003379 ORTHO05D003862 6.2e-36 156.0 231 47.2
C09p44800 Brassica napus HOM05D003379 ORTHO05D003862 8.1e-36 155.6 235 46.4
Prupe.1G216200 Prunus persica HOM05D003379 ORTHO05D003862 1.1e-35 155.2 427 36.3
Actinidia30590 Actinidia chinensis HOM05D003379 ORTHO05D003862 1.2e-34 151.8 444 35.4
Cfa009444 Carpinus fangiana HOM05D003379 ORTHO05D003862 2.6e-34 150.6 556 33.5
Hma1.2p1_0787F.1_g217850 Hydrangea macrophylla HOM05D003379 ORTHO05D003862 5.8e-34 149.4 461 34.9
TWI75G1860 Tripterygium wilfordii HOM05D003379 ORTHO05D003862 1.7e-33 147.9 443 34.8
BolC7t42848H Brassica oleracea HOM05D003379 ORTHO05D003862 2.2e-33 147.5 205 49.8
Manes.11G076800 Manihot esculenta HOM05D003379 ORTHO05D003862 2.2e-33 147.5 451 34.8
EL10Ac8g20553 Beta vulgaris HOM05D003379 ORTHO05D003862 2.9e-33 147.1 442 35.3
Actinidia22119 Actinidia chinensis HOM05D003379 ORTHO05D003862 8.4e-33 145.6 446 34.5
PGR142G1656 Punica granatum HOM05D003379 ORTHO05D003862 1.1e-32 145.2 435 34.0
Sc17g0006750 Simmondsia chinensis HOM05D003379 ORTHO05D003862 1.9e-32 144.4 446 32.3
Dinv25618 Davidia involucrata HOM05D003379 ORTHO05D003862 3.2e-32 143.7 452 35.0
FAN07G0868 Fragaria x ananassa HOM05D003379 ORTHO05D003862 3.2e-32 143.7 426 35.7
TAR374G0325 Trochodendron aralioides HOM05D003379 ORTHO05D003862 5.4e-32 142.9 454 34.1
Hund23589 Selenicereus undatus HOM05D003379 ORTHO05D003862 7.1e-32 142.5 466 35.0
CAN.G7.8 Capsicum annuum HOM05D003379 ORTHO05D003862 1.6e-31 141.4 424 36.1
Rhsim12G0017700 Rhododendron simsii HOM05D003379 ORTHO05D003862 1.6e-31 141.4 453 34.2
ClCG05G012630 Citrullus lanatus HOM05D003379 ORTHO05D003862 3.5e-31 140.2 431 36.7
COL.COLO4_13374 Corchorus olitorius HOM05D003379 ORTHO05D003862 3.5e-31 140.2 452 35.2
FvH4_4g22730 Fragaria vesca HOM05D003379 ORTHO05D003862 3.5e-31 140.2 431 34.8
FAN12G1414 Fragaria x ananassa HOM05D003379 ORTHO05D003862 3.5e-31 140.2 424 34.9
Gorai.005G196800 Gossypium raimondii HOM05D003379 ORTHO05D003862 3.5e-31 140.2 446 32.1
Peaxi162Scf00171g00621 Petunia axillaris HOM05D003379 ORTHO05D003862 3.5e-31 140.2 419 33.7
Atru.chr6.2693 Acer truncatum HOM05D003379 ORTHO05D003862 3.0e-30 137.1 442 33.9
MELO3C014781.2 Cucumis melo HOM05D003379 ORTHO05D003862 3.0e-30 137.1 431 37.1
Gohir.D02G175200 Gossypium hirsutum HOM05D003379 ORTHO05D003862 8.7e-30 135.6 437 31.8
Sabra02G0181500 Salix brachista HOM05D003379 ORTHO05D003862 1.5e-29 134.8 439 33.7
Gohir.A07G232700 Gossypium hirsutum HOM05D003379 ORTHO05D003862 2.5e-29 134.0 449 34.1
FAN17G1075 Fragaria x ananassa HOM05D003379 ORTHO05D003862 4.3e-29 133.3 426 35.2
Sed0002814 Sechium edule HOM05D003379 ORTHO05D003862 4.3e-29 133.3 440 35.5
Manes.09G187602 Manihot esculenta HOM05D003379 ORTHO05D003862 5.6e-29 132.9 429 33.3
Rhsim08G0039200 Rhododendron simsii HOM05D003379 ORTHO05D003862 5.6e-29 132.9 456 34.0
C09p09610 Brassica napus HOM05D003379 ORTHO05D003862 7.3e-29 132.5 128 63.3
Cfa007165 Carpinus fangiana HOM05D003379 ORTHO05D003862 7.3e-29 132.5 445 33.5
Nn4g22138 Nelumbo nucifera HOM05D003379 ORTHO05D003862 7.3e-29 132.5 431 34.3
MBI07_g41898_MAGBIO Magnolia biondii HOM05D003379 ORTHO05D003862 9.6e-29 132.1 457 32.2
ATR0582G197 Amborella trichopoda HOM05D003379 ORTHO05D003862 1.3e-28 131.7 438 33.1
CsaV3_3G027780 Cucumis sativus L. HOM05D003379 ORTHO05D003862 1.3e-28 131.7 427 35.1
C01p04570 Brassica napus HOM05D003379 ORTHO05D003862 1.6e-28 131.3 231 42.9
QL02p069539 Quercus lobata HOM05D003379 ORTHO05D003862 1.6e-28 131.3 442 33.3
C08p33300 Brassica napus HOM05D003379 ORTHO05D003862 2.1e-28 131.0 125 60.0
Gohir.D07G239900 Gossypium hirsutum HOM05D003379 ORTHO05D003862 2.8e-28 130.6 449 33.4
Duzib187G1855 Durio zibethinus HOM05D003379 ORTHO05D003862 3.6e-28 130.2 453 32.7
PGSC0003DMG400004243 Solanum tuberosum HOM05D003379 ORTHO05D003862 3.6e-28 130.2 426 32.4
Thecc.04G047800 Theobroma cacao HOM05D003379 ORTHO05D003862 4.8e-28 129.8 459 35.5
Potri.014G143800 Populus trichocarpa HOM05D003379 ORTHO05D003862 6.2e-28 129.4 438 33.6
Potri.002G238100 Populus trichocarpa HOM05D003379 ORTHO05D003862 8.1e-28 129.0 441 32.9
Aqoxy6G00186 Aquilegia oxysepala HOM05D003379 ORTHO05D003862 1.1e-27 128.6 431 33.4
CDE05G1535 Ceratophyllum demersum HOM05D003379 ORTHO05D003862 1.1e-27 128.6 438 33.1
Lj7A617T72 Lonicera japonica HOM05D003379 ORTHO05D003862 1.1e-27 128.6 446 32.3
MD13G1129900 Malus domestica HOM05D003379 ORTHO05D003862 1.1e-27 128.6 422 36.3
Thecc.02G193300 Theobroma cacao HOM05D003379 ORTHO05D003862 1.1e-27 128.6 439 34.6
vmacro18379 Vaccinium macrocarpon HOM05D003379 ORTHO05D003862 1.4e-27 128.3 449 32.3
Sopen04g017060 Solanum pennellii HOM05D003379 ORTHO05D003862 1.8e-27 127.9 426 32.2
Cpa.g.sc70.68 Carica papaya HOM05D003379 ORTHO05D003862 2.4e-27 127.5 445 33.0
Gorai.001G276100 Gossypium raimondii HOM05D003379 ORTHO05D003862 2.4e-27 127.5 448 33.7
Haze_14949 Corylus avellana HOM05D003379 ORTHO05D003862 4.0e-27 126.7 449 32.7
TWI32G0366 Tripterygium wilfordii HOM05D003379 ORTHO05D003862 6.9e-27 125.9 442 33.0
CDE05G0540 Ceratophyllum demersum HOM05D003379 ORTHO05D003862 1.3e-25 121.7 442 31.9
Ciclev10015333m.g Citrus clementina HOM05D003379 ORTHO05D003862 1.3e-25 121.7 448 31.0
Solyc04g024520.3 Solanum lycopersicum HOM05D003379 ORTHO05D003862 1.7e-25 121.3 426 31.7
Medtr7g084070 Medicago truncatula HOM05D003379 ORTHO05D003862 2.9e-25 120.6 398 32.4
Gohir.A03G152100 Gossypium hirsutum HOM05D003379 ORTHO05D003862 1.4e-24 118.2 383 33.4
Sed0021165 Sechium edule HOM05D003379 ORTHO05D003862 1.4e-24 118.2 441 34.2
TWI36G1473 Tripterygium wilfordii HOM05D003379 ORTHO05D003862 1.9e-24 117.9 445 32.6
GSVIVG01001080001 Vitis vinifera HOM05D003379 ORTHO05D003862 2.4e-24 117.5 419 33.9
C09p11640 Brassica napus HOM05D003379 ORTHO05D003862 3.2e-24 117.1 204 42.2
Nitab4.5_0005424g0010 Nicotiana tabacum HOM05D003379 ORTHO05D003862 3.2e-24 117.1 422 32.9
AUR62014693 Chenopodium quinoa HOM05D003379 ORTHO05D003862 5.4e-24 116.3 440 30.9
EL10Ac6g13403 Beta vulgaris HOM05D003379 ORTHO05D003862 7.1e-24 115.9 481 32.2
CiPaw.04G001500 Carya illinoinensis HOM05D003379 ORTHO05D003862 7.1e-24 115.9 438 32.4
Duzib147G0361 Durio zibethinus HOM05D003379 ORTHO05D003862 1.2e-23 115.2 387 34.4
MD09G1002700 Malus domestica HOM05D003379 ORTHO05D003862 1.6e-23 114.8 462 32.0
Ca_08145_v3 Cicer arietinum L. HOM05D003379 ORTHO05D003862 2.7e-23 114.0 423 32.6
Nitab4.5_0002116g0010 Nicotiana tabacum HOM05D003379 ORTHO05D003862 6.0e-23 112.8 422 31.8
Eucgr.I02446 Eucalyptus grandis HOM05D003379 ORTHO05D003862 7.9e-23 112.5 457 32.4
Actinidia36245 Actinidia chinensis HOM05D003379 ORTHO05D003862 1.8e-22 111.3 436 31.7
HanXRQChr12g0384731 Helianthus annuus HOM05D003379 ORTHO05D003862 2.3e-22 110.9 411 33.3
MD17G1006900 Malus domestica HOM05D003379 ORTHO05D003862 2.3e-22 110.9 446 31.4
FAN09G0861 Fragaria x ananassa HOM05D003379 ORTHO05D003862 5.1e-22 109.8 453 31.8
Cc07_g01280 Coffea canephora HOM05D003379 ORTHO05D003862 1.5e-21 108.2 487 31.0
Thhalv10013725m.g Eutrema salsugineum HOM05D003379 ORTHO05D003862 1.5e-21 108.2 440 33.9
FAN14G1380 Fragaria x ananassa HOM05D003379 ORTHO05D003862 2.5e-21 107.5 452 31.6
Sp6g30030 Schrenkiella parvula HOM05D003379 ORTHO05D003862 2.5e-21 107.5 437 33.4
BolC9t59151H Brassica oleracea HOM05D003379 ORTHO05D003862 4.3e-21 106.7 436 32.3
MSTRG.2062 Avicennia marina HOM05D003379 ORTHO05D003862 5.6e-21 106.3 459 30.7
VMungo1383G3656 Vigna mungo HOM05D003379 ORTHO05D003862 7.4e-21 105.9 431 32.7
Sc03g0005220 Simmondsia chinensis HOM05D003379 ORTHO05D003862 9.6e-21 105.5 435 34.5
FvH4_6g54290 Fragaria vesca HOM05D003379 ORTHO05D003862 1.3e-20 105.1 456 31.4
PSO017G0829 Papaver somniferum HOM05D003379 ORTHO05D003862 1.3e-20 105.1 455 30.8
Psat3g093320 Pisum sativum HOM05D003379 ORTHO05D003862 1.3e-20 105.1 322 32.6
Prupe.3G313500 Prunus persica HOM05D003379 ORTHO05D003862 1.3e-20 105.1 448 31.5
SalBow6G5409 Salvia bowleyana HOM05D003379 ORTHO05D003862 2.8e-20 104.0 306 34.3
AL6G24630 Arabidopsis lyrata HOM05D003379 ORTHO05D003862 4.8e-20 103.2 445 31.9
Lalb_Chr14g0364121 Lupinus albus HOM05D003379 ORTHO05D003862 4.8e-20 103.2 438 30.4
SGA_v2.0_scaffold306G48013 Striga asiatica HOM05D003379 ORTHO05D003862 6.2e-20 102.8 458 30.1
C09p63160 Brassica napus HOM05D003379 ORTHO05D003862 8.1e-20 102.4 438 32.2
DCAR_002970 Daucus carota HOM05D003379 ORTHO05D003862 8.1e-20 102.4 445 32.1
Phvul.001G084300 Phaseolus vulgaris HOM05D003379 ORTHO05D003862 1.1e-19 102.1 436 31.0
PSO478G4908 Papaver somniferum HOM05D003379 ORTHO05D003862 1.8e-19 101.3 454 30.4
FAN05G5138 Fragaria x ananassa HOM05D003379 ORTHO05D003862 2.4e-19 100.9 446 31.6
BolC9t57591H Brassica oleracea HOM05D013459 ORTHO05D018689 4.0e-19 100.1 181 41.4
Migut.E00693 Erythranthe guttata HOM05D003379 ORTHO05D003862 5.3e-19 99.8 445 29.9
AUR62037825 Chenopodium quinoa HOM05D003379 ORTHO05D003862 9.0e-19 99.0 355 34.4
Lsat_1_v5_gn_0_41321 Lactuca sativa HOM05D003379 ORTHO05D003862 2.0e-18 97.8 440 29.5
A10p24430 Brassica napus HOM05D003379 ORTHO05D003862 2.6e-18 97.4 429 30.5
AUR62017428 Chenopodium quinoa HOM05D003379 ORTHO05D003862 2.6e-18 97.4 355 31.8
HPP92_027984 Vanilla planifolia HOM05D003379 ORTHO05D003862 1.0e-17 95.5 368 30.2
BraA10t44509Z Brassica rapa HOM05D003379 ORTHO05D003862 2.9e-17 94.0 429 30.3
AT5G13970 Arabidopsis thaliana HOM05D003379 ORTHO05D003862 3.8e-17 93.6 441 32.0
Hund04187 Selenicereus undatus HOM05D003379 ORTHO05D003862 8.4e-17 92.4 486 29.4
CSS0041611 Camellia sinensis var. sinensis HOM05D003379 ORTHO05D003862 1.4e-16 91.7 436 28.2
Zm00001eb084870 Zea mays HOM05D003379 ORTHO05D003862 1.9e-16 91.3 460 30.2
Carub.0006s1216 Capsella rubella HOM05D003379 ORTHO05D003862 5.5e-16 89.7 437 30.7
Ah.03g136390 Amaranthus hybridus HOM05D003379 ORTHO05D003862 7.1e-16 89.4 487 29.4
Lj1g0011786 Lotus japonicus HOM05D003379 ORTHO05D003862 1.2e-15 88.6 455 29.9
Lalb_Chr22g0359971 Lupinus albus HOM05D003379 ORTHO05D003862 1.2e-15 88.6 258 35.7
HanXRQChr17g0550921 Helianthus annuus HOM05D003379 ORTHO05D003862 1.6e-15 88.2 301 34.6
Sopen02g036510 Solanum pennellii HOM05D003379 ORTHO05D003862 1.6e-15 88.2 429 28.2
AUR62012502 Chenopodium quinoa HOM05D003379 ORTHO05D003862 6.0e-15 86.3 311 31.5
CSS0018885 Camellia sinensis var. sinensis HOM05D003379 ORTHO05D003862 7.9e-15 85.9 213 35.7
Solyc02g091940.3 Solanum lycopersicum HOM05D003379 ORTHO05D003862 1.3e-14 85.1 429 28.0
Lsat_1_v5_gn_4_1521 Lactuca sativa HOM05D003379 ORTHO05D003862 6.7e-14 82.8 334 34.4
Lj6P837T11 Lonicera japonica HOM05D003379 ORTHO05D003862 6.7e-14 82.8 141 43.3
Glyma.19G103400 Glycine max HOM05D003379 ORTHO05D003862 1.1e-13 82.0 434 29.0
Glyma.16G047900 Glycine max HOM05D003379 ORTHO05D003862 2.5e-13 80.9 447 30.0
Aa31LG11G15410 Aethionema arabicum HOM05D003379 ORTHO05D003862 3.3e-13 80.5 448 31.2
Zm00001eb421370 Zea mays HOM05D003379 ORTHO05D003862 3.3e-13 80.5 455 29.0
CANSAT64G2275 Cannabis sativa HOM05D003379 ORTHO05D003862 4.3e-13 80.1 444 29.5
ECA234G2936 Erigeron canadensis HOM05D003379 ORTHO05D003862 2.1e-12 77.8 417 29.0
Oeu027918.1 Olea europaea HOM05D003379 ORTHO05D003862 2.1e-12 77.8 436 28.2
Nitab4.5_0001409g0240 Nicotiana tabacum HOM05D000225 ORTHO05D001595 2.8e-12 77.4 425 29.2
BcaC09g48308 Brassica carinata HOM05D003379 ORTHO05D003862 3.7e-12 77.0 67 65.7
Nitab4.5_0007209g0030 Nicotiana tabacum HOM05D000225 ORTHO05D001595 8.2e-12 75.9 412 29.9
CARHR199420 Cardamine hirsuta HOM05D003379 ORTHO05D003862 3.1e-11 73.9 254 33.1
CAN.G1061.1 Capsicum annuum HOM05D003379 ORTHO05D003862 2.6e-10 70.9 423 27.2
arahy.Tifrunner.gnm1.ann1.JRYW6U Arachis hypogaea HOM05D003379 ORTHO05D003862 3.4e-10 70.5 437 29.1
HPP92_006450 Vanilla planifolia HOM05D003379 ORTHO05D003862 3.4e-10 70.5 255 32.2
arahy.Tifrunner.gnm1.ann1.M1DIX9 Arachis hypogaea HOM05D003379 ORTHO05D003862 1.7e-09 68.2 445 28.8
PGSC0003DMG400021424 Solanum tuberosum HOM05D003379 ORTHO05D003862 4.2e-08 63.5 419 26.5
C09p60140 Brassica napus HOM05D003379 ORTHO05D003862 2.7e-07 60.8 72 54.2
unitig_22.g5626 Utricularia gibba HOM05D003379 ORTHO05D003862 1.0e-06 58.9 426 27.9
BolC1t05110H Brassica oleracea HOM05D003379 ORTHO05D003862 1.8e-06 58.2 57 59.6
vmacro01023 Vaccinium macrocarpon HOM05D003379 ORTHO05D003862 2.3e-06 57.8 451 27.5
Cpa.g.sc38.89 Carica papaya HOM05D003379 ORTHO05D003862 3.9e-06 57.0 180 31.1
BolC2t08454H Brassica oleracea HOM05D003379 ORTHO05D003862 8.7e-06 55.8 57 56.1


User provided reference genes

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