Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG3G13300 Aethionema arabicum HOM05D004327 ORTHO05D005032 4.3e-218 761.1 417 100.0
CARHR271210 Cardamine hirsuta HOM05D004327 ORTHO05D005032 7.7e-167 590.9 417 81.8
Carub.0008s1793 Capsella rubella HOM05D004327 ORTHO05D005032 1.0e-166 590.5 417 81.3
AL8G33390 Arabidopsis lyrata HOM05D004327 ORTHO05D005032 1.3e-166 590.1 417 80.3
Sp6g19130 Schrenkiella parvula HOM05D004327 ORTHO05D005032 8.0e-164 580.9 417 80.6
AT5G57410 Arabidopsis thaliana HOM05D004327 ORTHO05D005032 3.4e-162 575.5 416 79.3
Thhalv10013843m.g Eutrema salsugineum HOM05D004327 ORTHO05D005032 7.5e-162 574.3 400 82.0
BraA03t10592Z Brassica rapa HOM05D004327 ORTHO05D005032 9.2e-160 567.4 403 80.6
BolC3t13942H Brassica oleracea HOM05D004327 ORTHO05D005032 2.0e-159 566.2 403 80.4
A03p12840 Brassica napus HOM05D004327 ORTHO05D005032 3.5e-159 565.5 361 87.0
C03p15000 Brassica napus HOM05D004327 ORTHO05D005032 1.7e-158 563.1 366 86.1
BcaB01g04457 Brassica carinata HOM05D004327 ORTHO05D005032 1.5e-157 560.1 360 86.4
BcaC01g06496 Brassica carinata HOM05D004327 ORTHO05D005032 8.9e-155 550.8 408 77.7
THA.LOC104811786 Tarenaya hassleriana HOM05D004327 ORTHO05D005032 7.0e-152 541.2 403 76.7
THA.LOC104813521 Tarenaya hassleriana HOM05D004327 ORTHO05D005032 9.2e-152 540.8 449 71.9
Manes.14G154300 Manihot esculenta HOM05D004327 ORTHO05D005032 8.6e-150 534.3 417 73.9
Cpa.g.sc233.7 Carica papaya HOM05D004327 ORTHO05D005032 1.5e-149 533.5 405 74.3
VMungo1215G1888 Vigna mungo HOM05D004327 ORTHO05D005032 4.3e-149 531.9 416 72.4
Atru.chr7.613 Acer truncatum HOM05D004327 ORTHO05D005032 5.6e-149 531.6 419 73.5
CiPaw.07G192500 Carya illinoinensis HOM05D004327 ORTHO05D005032 2.8e-148 529.3 416 72.6
Thecc.09G176900 Theobroma cacao HOM05D004327 ORTHO05D005032 1.8e-147 526.6 417 73.1
Glyma.17G062900 Glycine max HOM05D004327 ORTHO05D005032 3.1e-147 525.8 416 71.6
Glyma.13G096600 Glycine max HOM05D004327 ORTHO05D005032 4.0e-147 525.4 414 72.0
Prupe.1G085300 Prunus persica HOM05D004327 ORTHO05D005032 8.9e-147 524.2 425 70.1
arahy.Tifrunner.gnm1.ann1.IHC8NS Arachis hypogaea HOM05D004327 ORTHO05D005032 2.0e-146 523.1 414 71.7
GSVIVG01029211001 Vitis vinifera HOM05D004327 ORTHO05D005032 2.6e-146 522.7 410 74.4
arahy.Tifrunner.gnm1.ann1.UF0NDT Arachis hypogaea HOM05D004327 ORTHO05D005032 4.4e-146 521.9 414 71.5
Phvul.003G145300 Phaseolus vulgaris HOM05D004327 ORTHO05D005032 6.4e-145 518.1 416 70.4
QL02p097831 Quercus lobata HOM05D004327 ORTHO05D005032 6.4e-145 518.1 410 73.2
Potri.018G092000 Populus trichocarpa HOM05D004327 ORTHO05D005032 1.1e-144 517.3 416 72.4
RcHm_v2.0_Chr4g0402371 Rosa chinensis HOM05D004327 ORTHO05D005032 1.1e-144 517.3 417 71.7
CANSAT11G1121 Cannabis sativa HOM05D004327 ORTHO05D005032 1.2e-143 513.8 425 68.5
Lj4g0017259 Lotus japonicus HOM05D004327 ORTHO05D005032 1.2e-143 513.8 413 71.4
CSS0007595 Camellia sinensis var. sinensis HOM05D004327 ORTHO05D005032 2.7e-143 512.7 426 70.7
Eucgr.C00153 Eucalyptus grandis HOM05D004327 ORTHO05D005032 7.8e-143 511.1 404 72.3
Medtr4g127970 Medicago truncatula HOM05D004327 ORTHO05D005032 1.0e-142 510.8 405 71.1
Gohir.D08G093800 Gossypium hirsutum HOM05D004327 ORTHO05D005032 1.3e-142 510.4 417 71.9
Dinv42719 Davidia involucrata HOM05D004327 ORTHO05D005032 3.0e-142 509.2 426 68.5
Dinv43382 Davidia involucrata HOM05D004327 ORTHO05D005032 3.0e-142 509.2 411 70.8
Gohir.A08G084200 Gossypium hirsutum HOM05D004327 ORTHO05D005032 3.9e-142 508.8 417 71.7
Ciclev10008675m.g Citrus clementina HOM05D004327 ORTHO05D005032 1.1e-141 507.3 414 71.5
Lalb_Chr07g0180501 Lupinus albus HOM05D004327 ORTHO05D005032 1.5e-141 506.9 374 75.7
MD16G1257500 Malus domestica HOM05D004327 ORTHO05D005032 2.5e-141 506.1 416 69.7
COL.COLO4_37716 Corchorus olitorius HOM05D004327 ORTHO05D005032 7.3e-141 504.6 413 72.6
Duzib150G0132 Durio zibethinus HOM05D004327 ORTHO05D005032 1.2e-140 503.8 417 70.7
CsaV3_2G008420 Cucumis sativus L. HOM05D004327 ORTHO05D005032 2.1e-140 503.1 416 69.5
Hma1.2p1_1025F.1_g249340 Hydrangea macrophylla HOM05D004327 ORTHO05D005032 2.1e-140 503.1 407 71.3
MD13G1253000 Malus domestica HOM05D004327 ORTHO05D005032 6.2e-140 501.5 402 70.4
Cc06_g13210 Coffea canephora HOM05D004327 ORTHO05D005032 1.1e-139 500.7 406 73.2
ClCG11G012140 Citrullus lanatus HOM05D004327 ORTHO05D005032 2.3e-139 499.6 423 68.6
Gorai.004G099500 Gossypium raimondii HOM05D004327 ORTHO05D005032 2.3e-139 499.6 420 70.5
TAR343G0001 Trochodendron aralioides HOM05D004327 ORTHO05D005032 5.2e-139 498.4 426 68.1
MSTRG.26218 Avicennia marina HOM05D004327 ORTHO05D005032 1.2e-138 497.3 383 72.6
Ca_21229_v3 Cicer arietinum L. HOM05D004327 ORTHO05D005032 5.8e-138 495.0 371 76.5
Duzib168G0099 Durio zibethinus HOM05D004327 ORTHO05D005032 7.5e-138 494.6 417 70.7
DCAR_017971 Daucus carota HOM05D004327 ORTHO05D005032 1.3e-137 493.8 366 75.1
Migut.K00240 Erythranthe guttata HOM05D004327 ORTHO05D005032 1.3e-137 493.8 405 69.9
FAN22G1646 Fragaria x ananassa HOM05D004327 ORTHO05D005032 1.3e-137 493.8 426 67.8
TPR.G5449 Trifolium pratense HOM05D004327 ORTHO05D005032 2.9e-137 492.7 407 71.3
Migut.J01485 Erythranthe guttata HOM05D004327 ORTHO05D005032 6.4e-137 491.5 366 75.1
FvH4_4g08170 Fragaria vesca HOM05D004327 ORTHO05D005032 8.3e-137 491.1 426 67.6
Psat4g169000 Pisum sativum HOM05D004327 ORTHO05D005032 4.1e-136 488.8 391 71.1
AL3G53050 Arabidopsis lyrata HOM05D004327 ORTHO05D005032 7.1e-136 488.0 365 73.2
ECA240G0157 Erigeron canadensis HOM05D004327 ORTHO05D005032 1.6e-135 486.9 365 75.6
Sed0007507 Sechium edule HOM05D004327 ORTHO05D005032 2.1e-135 486.5 425 66.1
vmacro06012 Vaccinium macrocarpon HOM05D004327 ORTHO05D005032 2.7e-135 486.1 393 69.7
PSO063G6085 Papaver somniferum HOM05D004327 ORTHO05D005032 6.0e-135 485.0 408 69.6
Nn8g40460 Nelumbo nucifera HOM05D004327 ORTHO05D005032 7.8e-135 484.6 426 67.1
MSTRG.6222 Avicennia marina HOM05D004327 ORTHO05D005032 3.9e-134 482.3 366 74.9
HanXRQChr11g0322421 Helianthus annuus HOM05D004327 ORTHO05D005032 1.1e-133 480.7 383 72.8
BolC9t54328H Brassica oleracea HOM05D004327 ORTHO05D005032 1.2e-132 477.2 426 65.3
Sabra18G0079100 Salix brachista HOM05D004327 ORTHO05D005032 1.6e-132 476.9 410 69.8
CARHR109440 Cardamine hirsuta HOM05D004327 ORTHO05D005032 2.3e-131 473.0 403 66.0
Sc14g0001280 Simmondsia chinensis HOM05D004327 ORTHO05D005032 2.3e-131 473.0 348 77.0
PSO170G3199 Papaver somniferum HOM05D004327 ORTHO05D005032 4.0e-131 472.2 408 68.4
THA.LOC104803493 Tarenaya hassleriana HOM05D004327 ORTHO05D005032 6.8e-131 471.5 397 69.3
Peaxi162Scf00231g00726 Petunia axillaris HOM05D004327 ORTHO05D005032 8.9e-131 471.1 413 68.0
Rhsim03G0264600 Rhododendron simsii HOM05D004327 ORTHO05D005032 8.9e-131 471.1 403 69.0
Carub.0003s3311 Capsella rubella HOM05D004327 ORTHO05D005032 3.4e-130 469.2 378 70.6
PGR142G4100 Punica granatum HOM05D004327 ORTHO05D005032 3.4e-130 469.2 410 66.8
Solyc07g019530.3 Solanum lycopersicum HOM05D004327 ORTHO05D005032 3.8e-129 465.7 407 68.6
Sopen07g008040 Solanum pennellii HOM05D004327 ORTHO05D005032 3.8e-129 465.7 407 68.6
BraA09t36853Z Brassica rapa HOM05D004327 ORTHO05D005032 6.4e-129 464.9 417 65.7
BcaB07g31641 Brassica carinata HOM05D004327 ORTHO05D005032 8.4e-129 464.5 377 70.8
ATR0580G352 Amborella trichopoda HOM05D004327 ORTHO05D005032 2.4e-128 463.0 362 73.5
Sp3g32340 Schrenkiella parvula HOM05D004327 ORTHO05D005032 2.4e-128 463.0 365 71.2
A09p12090 Brassica napus HOM05D004327 ORTHO05D005032 3.2e-128 462.6 360 72.8
SGA_v2.0_scaffold66G22446 Striga asiatica HOM05D004327 ORTHO05D005032 3.2e-128 462.6 415 67.0
BcaC04g22882 Brassica carinata HOM05D004327 ORTHO05D005032 2.1e-127 459.9 373 70.5
C09p14270 Brassica napus HOM05D004327 ORTHO05D005032 2.1e-127 459.9 373 70.5
CAN.G210.1 Capsicum annuum HOM05D004327 ORTHO05D005032 2.1e-127 459.9 391 69.6
Thhalv10022742m.g Eutrema salsugineum HOM05D004327 ORTHO05D005032 2.1e-127 459.9 365 71.0
SalBow6G1961 Salvia bowleyana HOM05D004327 ORTHO05D005032 4.6e-127 458.8 362 71.5
Zm00001eb178290 Zea mays HOM05D004327 ORTHO05D005032 6.0e-127 458.4 363 73.6
EL10Ac8g18287 Beta vulgaris HOM05D004327 ORTHO05D005032 7.8e-127 458.0 410 67.1
CDE04G3746 Ceratophyllum demersum HOM05D004327 ORTHO05D005032 7.8e-127 458.0 407 65.8
ECA236G3505 Erigeron canadensis HOM05D004327 ORTHO05D005032 5.1e-126 455.3 400 67.5
Lsat_1_v5_gn_7_54620 Lactuca sativa HOM05D004327 ORTHO05D005032 1.1e-125 454.1 369 72.6
Hund09030 Selenicereus undatus HOM05D004327 ORTHO05D005032 1.1e-125 454.1 403 66.7
HPP92_019412 Vanilla planifolia HOM05D004327 ORTHO05D005032 1.6e-124 450.3 364 72.0
Os08g0242900 Oryza sativa ssp. japonica HOM05D004327 ORTHO05D005032 1.8e-123 446.8 372 69.9
MBI14_g17374_MAGBIO Magnolia biondii HOM05D004327 ORTHO05D005032 5.8e-122 441.8 407 65.1
Aqoxy7G03046 Aquilegia oxysepala HOM05D004327 ORTHO05D005032 9.9e-122 441.0 389 66.8
AUR62033220 Chenopodium quinoa HOM05D004327 ORTHO05D005032 1.7e-121 440.3 387 69.3
Lalb_Chr13g0300201 Lupinus albus HOM05D004327 ORTHO05D005032 6.4e-121 438.3 352 71.6
CDE07G0842 Ceratophyllum demersum HOM05D004327 ORTHO05D005032 1.1e-120 437.6 389 65.6
Dinv41244 Davidia involucrata HOM05D004327 ORTHO05D005032 1.9e-120 436.8 322 78.6
Aa31LG8G15970 Aethionema arabicum HOM05D004327 ORTHO05D005032 2.7e-119 433.0 366 68.9
SHI02909 Sapria himalayana HOM05D004327 ORTHO05D005032 3.0e-118 429.5 368 69.3
Actinidia17317 Actinidia chinensis HOM05D004327 ORTHO05D005032 6.6e-118 428.3 424 63.0
unitig_0.g2679 Utricularia gibba HOM05D004327 ORTHO05D005032 3.6e-116 422.5 372 68.0
Sed0007415 Sechium edule HOM05D004327 ORTHO05D005032 2.4e-115 419.9 351 67.2
CiPaw.08G036000 Carya illinoinensis HOM05D004327 ORTHO05D005032 7.6e-114 414.8 386 63.7
AagrBONN_evm.TU.Sc2ySwM_117.785 Anthoceros agrestis HOM05D004327 ORTHO05D005032 1.1e-112 411.0 374 62.6
AUR62021302 Chenopodium quinoa HOM05D004327 ORTHO05D005032 1.4e-112 410.6 367 68.4
SMO352G0043 Selaginella moellendorffii HOM05D004327 ORTHO05D005032 4.6e-111 405.6 370 62.2
Pp3c12_10100 Physcomitrium patens HOM05D004327 ORTHO05D005032 5.3e-107 392.1 355 61.1
Nitab4.5_0004572g0010 Nicotiana tabacum HOM05D004327 ORTHO05D005032 1.2e-106 391.0 402 60.7
MELO3C004022.2 Cucumis melo HOM05D004327 ORTHO05D005032 2.2e-105 386.7 295 74.2
FAN17G0468 Fragaria x ananassa HOM05D004327 ORTHO05D005032 2.9e-105 386.3 369 62.3
AT2G18876 Arabidopsis thaliana HOM05D004327 ORTHO05D005032 4.2e-104 382.5 271 77.5
TAR636G3612 Trochodendron aralioides HOM05D000809 ORTHO05D001196 1.2e-103 380.9 294 76.5
Lj9A24G29 Lonicera japonica HOM05D004327 ORTHO05D005032 2.3e-102 376.7 284 73.6
Pp3c5_23860 Physcomitrium patens HOM05D004327 ORTHO05D005032 3.3e-101 372.9 358 57.8
BcaB01g04461 Brassica carinata HOM05D004327 ORTHO05D005032 1.1e-99 367.9 325 68.3
Pp3c3_22200 Physcomitrium patens HOM05D004327 ORTHO05D005032 6.9e-99 365.2 367 57.2
Nitab4.5_0005945g0010 Nicotiana tabacum HOM05D004327 ORTHO05D005032 1.3e-94 350.9 366 60.4
Pp3c10_16450 Physcomitrium patens HOM05D004327 ORTHO05D005032 6.7e-94 348.6 330 58.5
SMO137G0257 Selaginella moellendorffii HOM05D004327 ORTHO05D005032 8.7e-94 348.2 346 56.9
Mapoly0023s0050 Marchantia polymorpha HOM05D004327 ORTHO05D005032 9.7e-93 344.7 358 55.9
Actinidia38633 Actinidia chinensis HOM05D004327 ORTHO05D005032 2.1e-92 343.6 325 62.5
CBR_g34541 Chara braunii HOM05D004327 ORTHO05D005032 6.9e-91 338.6 351 55.3
Haze_22092 Corylus avellana HOM05D004327 ORTHO05D005032 5.9e-90 335.5 306 64.1
Pp3c16_10790 Physcomitrium patens HOM05D004327 ORTHO05D005032 1.3e-89 334.3 367 53.1
Duzib170G0255 Durio zibethinus HOM05D004327 ORTHO05D005032 8.5e-89 331.6 218 83.5
Actinidia27011 Actinidia chinensis HOM05D004327 ORTHO05D005032 3.1e-83 313.2 325 60.3
BcaC01g06490 Brassica carinata HOM05D004327 ORTHO05D005032 3.8e-81 306.2 175 93.7
CBR_g4121 Chara braunii HOM05D004327 ORTHO05D005032 1.1e-80 304.7 374 51.3
Actinidia02748 Actinidia chinensis HOM05D004327 ORTHO05D005032 2.8e-76 290.0 226 73.0
Aqoxy4G01695 Aquilegia oxysepala HOM05D004327 ORTHO05D005032 6.8e-46 189.1 126 81.0
BcaC01g06489 Brassica carinata HOM05D004327 ORTHO05D005032 7.0e-43 179.1 179 63.1
Oeu042171.1 Olea europaea HOM05D004327 ORTHO05D005032 2.8e-39 167.2 121 76.0
FAN17G0800 Fragaria x ananassa HOM05D004327 ORTHO05D005032 2.6e-37 160.6 138 66.7
Haze_22093 Corylus avellana HOM05D004327 ORTHO05D005032 7.5e-37 159.1 137 70.8
SEGI_01506 Sequoiadendron giganteum HOM05D004327 ORTHO05D005032 8.3e-28 129.0 101 69.3
Lj9A25T20 Lonicera japonica HOM05D004327 ORTHO05D005032 9.2e-27 125.6 97 69.1
BraA02t05921Z Brassica rapa HOM05D004327 ORTHO05D005032 3.9e-25 120.2 81 82.7
HanXRQChr09g0245491 Helianthus annuus HOM05D000502 ORTHO05D005032 8.6e-25 119.0 102 60.8
HanXRQChr08g0229701 Helianthus annuus HOM05D000502 ORTHO05D005032 3.6e-23 113.6 106 59.4
HanXRQChr13g0404041 Helianthus annuus HOM05D000502 ORTHO05D005032 4.7e-23 113.2 95 62.1
SEGI_38031 Sequoiadendron giganteum HOM05D004327 ORTHO05D005032 5.8e-21 106.3 82 68.3
C02p14250 Brassica napus HOM05D004327 ORTHO05D032179 3.7e-20 103.6 128 54.7
BcaB05g22345 Brassica carinata HOM05D004327 ORTHO05D005032 3.5e-18 97.1 95 63.2
Pp3c26_7180 Physcomitrium patens HOM05D004327 ORTHO05D005032 1.3e-17 95.1 116 44.0
CiPaw.01G111100 Carya illinoinensis HOM05D002292 ORTHO05D005032 4.7e-15 86.7 58 84.5
Aqoxy7G03035 Aquilegia oxysepala HOM05D004327 ORTHO05D005032 1.4e-14 85.1 132 45.5
BcaC03g14154 Brassica carinata HOM05D004327 ORTHO05D032179 5.2e-14 83.2 76 60.5
COL.COLO4_28287 Corchorus olitorius HOM05D004327 ORTHO05D005032 6.4e-12 76.3 54 81.5
Pp3c25_9090 Physcomitrium patens HOM05D004327 ORTHO05D005032 6.4e-12 76.3 99 50.5
BolC9t54329H Brassica oleracea HOM05D004327 ORTHO05D005032 8.4e-12 75.9 69 63.8
Oeu003512.1 Olea europaea HOM05D004327 ORTHO05D005032 7.1e-11 72.8 42 83.3
Glyma.09G140000 Glycine max HOM05D004327 ORTHO05D005032 8.7e-09 65.9 73 49.3
CiPaw.16G058000 Carya illinoinensis HOM05D002292 ORTHO05D003256 2.4e-06 57.8 38 84.2


User provided reference genes

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