Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG3G12580 Aethionema arabicum HOM05D005294 ORTHO05D006720 1.2e-79 299.7 145 100.0
Aa31LG3G12620 Aethionema arabicum HOM05D005294 ORTHO05D006720 1.2e-79 299.7 145 100.0
Aa31sc2040G10 Aethionema arabicum HOM05D005294 ORTHO05D006720 9.5e-72 273.5 135 99.3
Aa31LG3G12690 Aethionema arabicum HOM05D005294 ORTHO05D006720 2.5e-56 222.2 127 86.6
AT5G56740 Arabidopsis thaliana HOM05D005294 ORTHO05D006720 6.4e-52 207.6 127 79.5
AL8G32570 Arabidopsis lyrata HOM05D005294 ORTHO05D006720 2.4e-51 205.7 127 78.7
Thhalv10013465m.g Eutrema salsugineum HOM05D005294 ORTHO05D006720 3.2e-51 205.3 127 78.7
A10p14080 Brassica napus HOM05D005294 ORTHO05D006720 1.2e-50 203.4 126 78.6
BraA10t43499Z Brassica rapa HOM05D005294 ORTHO05D006720 1.6e-50 203.0 126 77.8
Carub.0008s1722 Capsella rubella HOM05D005294 ORTHO05D006720 1.6e-50 203.0 127 76.4
BcaB01g04417 Brassica carinata HOM05D005294 ORTHO05D006720 6.0e-50 201.1 127 74.8
CARHR270490 Cardamine hirsuta HOM05D005294 ORTHO05D006720 6.0e-50 201.1 127 76.4
BraA03t10634Z Brassica rapa HOM05D005294 ORTHO05D006720 1.0e-49 200.3 126 75.4
Sp6g18490 Schrenkiella parvula HOM05D005294 ORTHO05D006720 1.7e-49 199.5 126 77.8
BcaC01g06444 Brassica carinata HOM05D005294 ORTHO05D006720 5.1e-49 198.0 126 73.8
THA.LOC104811733 Tarenaya hassleriana HOM05D005294 ORTHO05D006720 5.1e-49 198.0 127 73.2
A03p13220 Brassica napus HOM05D005294 ORTHO05D006720 6.6e-49 197.6 126 73.8
BcaC04g20057 Brassica carinata HOM05D005294 ORTHO05D006720 8.7e-49 197.2 126 74.6
C09p48310 Brassica napus HOM05D005294 ORTHO05D006720 8.7e-49 197.2 126 74.6
BolC9t57681H Brassica oleracea HOM05D005294 ORTHO05D006720 8.7e-49 197.2 126 74.6
C03p15490 Brassica napus HOM05D005294 ORTHO05D006720 2.5e-48 195.7 126 72.2
BolC3t13987H Brassica oleracea HOM05D005294 ORTHO05D006720 2.5e-48 195.7 126 72.2
BcaB08g36064 Brassica carinata HOM05D005294 ORTHO05D006720 2.1e-47 192.6 126 73.8
Cpa.g.sc32.101 Carica papaya HOM05D005294 ORTHO05D006720 9.6e-40 167.2 124 63.7
CiPaw.03G219800 Carya illinoinensis HOM05D005294 ORTHO05D006720 9.6e-40 167.2 127 60.6
Thecc.09G094300 Theobroma cacao HOM05D005294 ORTHO05D006720 9.6e-40 167.2 127 59.1
TWI34G0876 Tripterygium wilfordii HOM05D005294 ORTHO05D006720 1.3e-39 166.8 127 59.1
Cfa003134 Carpinus fangiana HOM05D005294 ORTHO05D006720 2.1e-39 166.0 127 59.8
COL.COLO4_18242 Corchorus olitorius HOM05D005294 ORTHO05D006720 2.8e-39 165.6 127 59.1
Haze_25869 Corylus avellana HOM05D005294 ORTHO05D006720 2.8e-39 165.6 127 59.8
TPR.G25848 Trifolium pratense HOM05D005294 ORTHO05D006720 8.1e-39 164.1 127 59.8
Ciclev10008203m.g Citrus clementina HOM05D005294 ORTHO05D006720 1.1e-38 163.7 124 60.5
Gohir.D06G069100 Gossypium hirsutum HOM05D005294 ORTHO05D006720 1.4e-38 163.3 127 59.1
Gorai.010G080700 Gossypium raimondii HOM05D005294 ORTHO05D006720 1.4e-38 163.3 127 59.1
Lj7C671G8 Lonicera japonica HOM05D005294 ORTHO05D006720 1.8e-38 162.9 124 57.3
Medtr5g080780 Medicago truncatula HOM05D005294 ORTHO05D006720 1.8e-38 162.9 127 59.1
Gohir.A06G070500 Gossypium hirsutum HOM05D005294 ORTHO05D006720 2.4e-38 162.5 127 59.1
Manes.16G105100 Manihot esculenta HOM05D005294 ORTHO05D006720 3.1e-38 162.2 124 59.7
Duzib168G2227 Durio zibethinus HOM05D005294 ORTHO05D006720 6.9e-38 161.0 127 58.3
Actinidia39748 Actinidia chinensis HOM05D005294 ORTHO05D006720 9.0e-38 160.6 124 55.6
Psat2g038680 Pisum sativum HOM05D005294 ORTHO05D006720 1.2e-37 160.2 127 58.3
VMungo0647G0234 Vigna mungo HOM05D005294 ORTHO05D006720 1.2e-37 160.2 125 58.4
Atru.chr7.1522 Acer truncatum HOM05D005294 ORTHO05D006720 1.5e-37 159.8 128 57.8
QL02p063470 Quercus lobata HOM05D005294 ORTHO05D006720 2.0e-37 159.5 128 55.5
Sabra13G0059500 Salix brachista HOM05D005294 ORTHO05D006720 3.4e-37 158.7 124 58.1
TWI63G0491 Tripterygium wilfordii HOM05D005294 ORTHO05D006720 3.4e-37 158.7 126 57.1
CANSAT64G1758 Cannabis sativa HOM05D005294 ORTHO05D006720 4.5e-37 158.3 124 56.5
Potri.013G068200 Populus trichocarpa HOM05D005294 ORTHO05D006720 4.5e-37 158.3 124 57.3
LjContig00141g0021499 Lotus japonicus HOM05D005294 ORTHO05D006720 5.8e-37 157.9 127 56.7
Lsat_1_v5_gn_5_146040 Lactuca sativa HOM05D005294 ORTHO05D006720 1.3e-36 156.8 124 53.2
GSVIVG01015248001 Vitis vinifera HOM05D005294 ORTHO05D006720 1.7e-36 156.4 124 58.1
arahy.Tifrunner.gnm1.ann1.T94LMP Arachis hypogaea HOM05D005294 ORTHO05D006720 2.9e-36 155.6 127 56.7
MD15G1202500 Malus domestica HOM05D005294 ORTHO05D006720 2.9e-36 155.6 124 54.0
Nitab4.5_0004011g0060 Nicotiana tabacum HOM05D005294 ORTHO05D006720 2.9e-36 155.6 126 54.8
arahy.Tifrunner.gnm1.ann1.CWN4E9 Arachis hypogaea HOM05D005294 ORTHO05D006720 1.1e-35 153.7 127 55.1
HanXRQChr12g0355321 Helianthus annuus HOM05D005294 ORTHO05D006720 1.1e-35 153.7 124 51.6
Sopen02g017740 Solanum pennellii HOM05D005294 ORTHO05D006720 1.1e-35 153.7 126 53.2
vmacro10822 Vaccinium macrocarpon HOM05D005294 ORTHO05D006720 1.4e-35 153.3 124 54.0
DCAR_012006 Daucus carota HOM05D005294 ORTHO05D006720 1.9e-35 152.9 134 50.0
Eucgr.C03688 Eucalyptus grandis HOM05D005294 ORTHO05D006720 1.9e-35 152.9 127 53.5
Dinv36732 Davidia involucrata HOM05D005294 ORTHO05D006720 3.2e-35 152.1 127 54.3
Lalb_Chr15g0084501 Lupinus albus HOM05D005294 ORTHO05D006720 4.2e-35 151.8 124 56.5
MD02G1072700 Malus domestica HOM05D005294 ORTHO05D006720 5.4e-35 151.4 124 53.2
Phvul.008G230500 Phaseolus vulgaris HOM05D005294 ORTHO05D006720 5.4e-35 151.4 125 55.2
Rhsim05G0031400 Rhododendron simsii HOM05D005294 ORTHO05D006720 7.1e-35 151.0 124 54.8
Solyc02g068580.1 Solanum lycopersicum HOM05D005294 ORTHO05D006720 7.1e-35 151.0 126 51.6
CSS0004577 Camellia sinensis var. sinensis HOM05D005294 ORTHO05D006720 1.2e-34 150.2 124 54.0
PGR102G3363 Punica granatum HOM05D005294 ORTHO05D006720 1.2e-34 150.2 127 52.8
Prupe.7G214700 Prunus persica HOM05D005294 ORTHO05D006720 1.6e-34 149.8 124 52.4
Lalb_Chr18g0053011 Lupinus albus HOM05D005294 ORTHO05D006720 2.7e-34 149.1 127 54.3
Nitab4.5_0001492g0020 Nicotiana tabacum HOM05D005294 ORTHO05D006720 2.7e-34 149.1 126 51.6
CSS0007070 Camellia sinensis var. sinensis HOM05D005294 ORTHO05D006720 3.5e-34 148.7 124 54.0
Glyma.14G065800 Glycine max HOM05D005294 ORTHO05D006720 4.6e-34 148.3 125 55.2
Sc08g0008210 Simmondsia chinensis HOM05D005294 ORTHO05D006720 6.0e-34 147.9 124 51.6
CAN.G142.7 Capsicum annuum HOM05D005294 ORTHO05D006720 7.9e-34 147.5 128 52.3
TAR624G1381 Trochodendron aralioides HOM05D005294 ORTHO05D006720 7.9e-34 147.5 127 55.9
ECA234G1346 Erigeron canadensis HOM05D005294 ORTHO05D006720 1.0e-33 147.1 135 47.4
SGA_v2.0_scaffold62G21576 Striga asiatica HOM05D005294 ORTHO05D006720 1.3e-33 146.7 126 50.0
PGSC0003DMG400033362 Solanum tuberosum HOM05D005294 ORTHO05D006720 2.3e-33 146.0 126 50.8
Peaxi162Scf01468g00004 Petunia axillaris HOM05D005294 ORTHO05D006720 3.0e-33 145.6 126 53.2
MSTRG.19532 Avicennia marina HOM05D005294 ORTHO05D006720 3.9e-33 145.2 126 50.0
AUR62008827 Chenopodium quinoa HOM05D005294 ORTHO05D006720 5.1e-33 144.8 127 52.0
FvH4_1g06810 Fragaria vesca HOM05D005294 ORTHO05D006720 5.1e-33 144.8 135 48.1
FAN19G0312 Fragaria x ananassa HOM05D005294 ORTHO05D006720 5.1e-33 144.8 135 48.1
FAN26G0700 Fragaria x ananassa HOM05D005294 ORTHO05D006720 5.1e-33 144.8 135 48.1
FAN26G2354 Fragaria x ananassa HOM05D005294 ORTHO05D006720 5.1e-33 144.8 135 48.1
Glyma.02G250900 Glycine max HOM05D005294 ORTHO05D006720 5.1e-33 144.8 125 54.4
Cc06_g10960 Coffea canephora HOM05D005294 ORTHO05D006720 8.7e-33 144.1 126 48.4
RcHm_v2.0_Chr2g0092581 Rosa chinensis HOM05D005294 ORTHO05D006720 1.5e-32 143.3 135 46.7
Oeu052126.1 Olea europaea HOM05D005294 ORTHO05D006720 1.9e-32 142.9 123 55.3
AUR62025414 Chenopodium quinoa HOM05D005294 ORTHO05D006720 2.5e-32 142.5 127 50.4
FAN23G1873 Fragaria x ananassa HOM05D005294 ORTHO05D006720 2.5e-32 142.5 135 47.4
Ca_05904_v3 Cicer arietinum L. HOM05D005294 ORTHO05D006720 3.3e-32 142.1 125 51.2
Migut.J00438 Erythranthe guttata HOM05D005294 ORTHO05D006720 4.3e-32 141.7 126 46.8
Aqoxy4G01946 Aquilegia oxysepala HOM05D005294 ORTHO05D006720 7.4e-32 141.0 125 57.6
Hund05510 Selenicereus undatus HOM05D005294 ORTHO05D006720 7.4e-32 141.0 127 49.6
Aqoxy7G03926 Aquilegia oxysepala HOM05D005294 ORTHO05D006720 2.8e-31 139.0 125 56.8
EL10Ac7g17721 Beta vulgaris HOM05D005294 ORTHO05D006720 1.8e-30 136.3 127 49.6
Haze_25870 Corylus avellana HOM05D005294 ORTHO05D006720 5.3e-30 134.8 116 52.6
SGA_v2.0_scaffold10G05199 Striga asiatica HOM05D005294 ORTHO05D006720 1.5e-29 133.3 127 51.2
PSO210G3043 Papaver somniferum HOM05D005294 ORTHO05D006720 7.6e-29 131.0 136 49.3
MBI04_g06995_MAGBIO Magnolia biondii HOM05D005294 ORTHO05D006720 4.9e-28 128.3 126 50.0
Ah.15g091540 Amaranthus hybridus HOM05D005294 ORTHO05D006720 6.4e-28 127.9 125 47.2
PSO210G1233 Papaver somniferum HOM05D005294 ORTHO05D006720 8.4e-28 127.5 136 47.8
CsaV3_2G001600 Cucumis sativus L. HOM05D005294 ORTHO05D006720 1.4e-27 126.7 128 44.5
MBI14_g43979_MAGBIO Magnolia biondii HOM05D005294 ORTHO05D006720 1.4e-27 126.7 126 49.2
MELO3C004615.2 Cucumis melo HOM05D005294 ORTHO05D006720 1.9e-27 126.3 128 43.8
ClCG11G001870 Citrullus lanatus HOM05D005294 ORTHO05D006720 3.2e-27 125.6 128 43.8
Sed0020374 Sechium edule HOM05D005294 ORTHO05D006720 4.2e-27 125.2 128 43.8
HPP92_009085 Vanilla planifolia HOM05D005294 ORTHO05D006720 2.3e-25 119.4 128 46.9
Os09g0347800 Oryza sativa ssp. japonica HOM05D005294 ORTHO05D006720 3.3e-24 115.5 123 45.5
Zm00001eb310550 Zea mays HOM05D005294 ORTHO05D006720 3.3e-24 115.5 123 45.5
SHI02790 Sapria himalayana HOM05D005294 ORTHO05D006720 1.3e-20 103.6 132 38.6
Actinidia25279 Actinidia chinensis HOM05D005294 ORTHO05D006720 2.2e-20 102.8 85 55.3
ATR0705G179 Amborella trichopoda HOM05D005294 ORTHO05D006720 3.2e-19 99.0 144 33.3
unitig_26.g9161 Utricularia gibba HOM05D005294 ORTHO05D006720 4.2e-19 98.6 128 35.2
CDE09G1011 Ceratophyllum demersum HOM05D005294 ORTHO05D006720 6.7e-17 91.3 121 40.5
Aqoxy4G01951 Aquilegia oxysepala HOM05D005294 ORTHO05D006720 5.9e-13 78.2 63 63.5
SEGI_34717 Sequoiadendron giganteum HOM05D005294 ORTHO05D006720 1.0e-12 77.4 159 29.6
SGA_v2.0_scaffold194G40752 Striga asiatica HOM05D005294 ORTHO05D006720 1.9e-11 73.2 73 42.5
SMO244G0078 Selaginella moellendorffii HOM05D005294 ORTHO05D006720 3.2e-11 72.4 92 38.0
RcHm_v2.0_Chr2g0093931 Rosa chinensis HOM05D005294 ORTHO05D006720 2.1e-10 69.7 69 42.0
CBR_g45363 Chara braunii HOM05D005294 ORTHO05D006720 6.1e-10 68.2 126 29.4
Zm00001eb171070 Zea mays HOM05D005294 ORTHO05D006720 1.0e-09 67.4 76 39.5
Pp3c15_19200 Physcomitrium patens HOM05D005294 ORTHO05D006720 3.0e-09 65.9 124 28.2
Zm00001eb301910 Zea mays HOM05D005294 ORTHO05D006720 3.9e-09 65.5 76 39.5
Mapoly0079s0005 Marchantia polymorpha HOM05D005294 ORTHO05D006720 6.7e-09 64.7 166 25.3


User provided reference genes

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