Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG3G12610 Aethionema arabicum HOM05D004235 ORTHO05D005157 1.5e-36 155.6 77 100.0
Aa31LG3G12570 Aethionema arabicum HOM05D004235 ORTHO05D005157 8.7e-32 139.8 68 100.0
Aa31LG3G12550 Aethionema arabicum HOM05D004235 ORTHO05D005157 4.3e-31 137.5 69 95.7
Carub.0008s1721 Capsella rubella HOM05D004235 ORTHO05D005157 3.7e-30 134.4 69 91.3
AT5G56730 Arabidopsis thaliana HOM05D004235 ORTHO05D005157 6.2e-30 133.7 69 91.3
CARHR270480 Cardamine hirsuta HOM05D004235 ORTHO05D005157 6.2e-30 133.7 69 91.3
Thhalv10012682m.g Eutrema salsugineum HOM05D004235 ORTHO05D005157 8.1e-30 133.3 69 89.9
AL8G32560 Arabidopsis lyrata HOM05D004235 ORTHO05D005157 1.4e-29 132.5 68 91.2
Aa31LG3G12660 Aethionema arabicum HOM05D004235 ORTHO05D005157 1.8e-29 132.1 69 92.8
BcaC04g20058 Brassica carinata HOM05D004235 ORTHO05D005157 1.8e-29 132.1 69 88.4
A10p14070 Brassica napus HOM05D004235 ORTHO05D005157 1.8e-29 132.1 69 88.4
C09p48300 Brassica napus HOM05D004235 ORTHO05D005157 1.8e-29 132.1 69 88.4
BolC9t57680H Brassica oleracea HOM05D004235 ORTHO05D005157 1.8e-29 132.1 69 88.4
BraA10t43498Z Brassica rapa HOM05D004235 ORTHO05D005157 1.8e-29 132.1 69 88.4
BcaB08g36065 Brassica carinata HOM05D004235 ORTHO05D005157 3.1e-29 131.3 69 87.0
Sp6g18480 Schrenkiella parvula HOM05D004235 ORTHO05D005157 9.0e-29 129.8 69 87.0
C02p28510 Brassica napus HOM05D004235 ORTHO05D005157 3.4e-28 127.9 69 87.0
BolC2t08892H Brassica oleracea HOM05D004235 ORTHO05D005157 3.4e-28 127.9 69 87.0
BcaC03g15257 Brassica carinata HOM05D004235 ORTHO05D005157 1.7e-27 125.6 65 90.8
THA.LOC104817747 Tarenaya hassleriana HOM05D004235 ORTHO05D005157 2.2e-27 125.2 68 83.8
THA.LOC104811734 Tarenaya hassleriana HOM05D004235 ORTHO05D005157 2.9e-27 124.8 68 85.3
Solyc12g008710.2 Solanum lycopersicum HOM05D004235 ORTHO05D005157 2.1e-25 118.6 68 79.4
Sopen12g003640 Solanum pennellii HOM05D004235 ORTHO05D005157 2.1e-25 118.6 68 79.4
Nitab4.5_0003781g0020 Nicotiana tabacum HOM05D004235 ORTHO05D005157 3.5e-25 117.9 68 82.4
Atru.chr7.1524 Acer truncatum HOM05D004235 ORTHO05D005157 4.6e-25 117.5 68 80.9
Ciclev10010146m.g Citrus clementina HOM05D004235 ORTHO05D005157 6.0e-25 117.1 70 78.6
Lj7C671G7 Lonicera japonica HOM05D004235 ORTHO05D005157 6.0e-25 117.1 69 79.7
Sc04g0004610 Simmondsia chinensis HOM05D004235 ORTHO05D005157 7.9e-25 116.7 67 80.6
PGSC0003DMG402000346 Solanum tuberosum HOM05D004235 ORTHO05D005157 7.9e-25 116.7 68 79.4
TAR383G0914 Trochodendron aralioides HOM05D004235 ORTHO05D005157 1.0e-24 116.3 68 77.9
Gohir.A05G028200 Gossypium hirsutum HOM05D004235 ORTHO05D005157 1.3e-24 115.9 68 79.4
COL.COLO4_18249 Corchorus olitorius HOM05D004235 ORTHO05D005157 1.8e-24 115.5 68 77.9
Duzib168G2142 Durio zibethinus HOM05D004235 ORTHO05D005157 1.8e-24 115.5 68 77.9
Gohir.D05G029800 Gossypium hirsutum HOM05D004235 ORTHO05D005157 1.8e-24 115.5 68 77.9
Nitab4.5_0000540g0150 Nicotiana tabacum HOM05D004235 ORTHO05D005157 1.8e-24 115.5 68 80.9
Peaxi162Scf00498g00032 Petunia axillaris HOM05D004235 ORTHO05D005157 2.3e-24 115.2 68 79.4
CANSAT56G3324 Cannabis sativa HOM05D004235 ORTHO05D005157 3.0e-24 114.8 69 76.8
CAN.G1241.9 Capsicum annuum HOM05D004235 ORTHO05D005157 3.0e-24 114.8 68 77.9
Gorai.009G030000 Gossypium raimondii HOM05D004235 ORTHO05D005157 3.0e-24 114.8 68 77.9
TWI34G1426 Tripterygium wilfordii HOM05D004235 ORTHO05D005157 3.0e-24 114.8 69 76.8
Dinv36730 Davidia involucrata HOM05D004235 ORTHO05D005157 5.1e-24 114.0 68 79.4
Thecc.09G094700 Theobroma cacao HOM05D004235 ORTHO05D005157 6.7e-24 113.6 68 76.5
FvH4_1g06790 Fragaria vesca HOM05D004235 ORTHO05D005157 8.7e-24 113.2 68 77.9
FAN19G3193 Fragaria x ananassa HOM05D004235 ORTHO05D005157 8.7e-24 113.2 68 77.9
FAN26G0912 Fragaria x ananassa HOM05D004235 ORTHO05D005157 8.7e-24 113.2 68 77.9
ATR0789G124 Amborella trichopoda HOM05D004235 ORTHO05D005157 1.1e-23 112.8 69 75.4
Manes.16G105300 Manihot esculenta HOM05D004235 ORTHO05D005157 1.1e-23 112.8 68 75.0
Hma1.2p1_1074F.1_g254400 Hydrangea macrophylla HOM05D004235 ORTHO05D005157 1.5e-23 112.5 68 77.9
Prupe.7G214900 Prunus persica HOM05D004235 ORTHO05D005157 1.5e-23 112.5 68 76.5
CSS0042623 Camellia sinensis var. sinensis HOM05D004235 ORTHO05D005157 1.9e-23 112.1 69 75.4
CSS0043888 Camellia sinensis var. sinensis HOM05D004235 ORTHO05D005157 1.9e-23 112.1 69 75.4
FAN28G2658 Fragaria x ananassa HOM05D004235 ORTHO05D005157 1.9e-23 112.1 68 76.5
QL02p063521 Quercus lobata HOM05D004235 ORTHO05D005157 1.9e-23 112.1 68 76.5
FAN23G1406 Fragaria x ananassa HOM05D004235 ORTHO05D005157 2.5e-23 111.7 70 75.7
CSS0031019 Camellia sinensis var. sinensis HOM05D004235 ORTHO05D005157 3.3e-23 111.3 68 76.5
Cc06_g10940 Coffea canephora HOM05D004235 ORTHO05D005157 4.3e-23 110.9 68 76.5
Sed0001781 Sechium edule HOM05D004235 ORTHO05D005157 4.3e-23 110.9 68 75.0
Cpa.g.sc2319.2 Carica papaya HOM05D004235 ORTHO05D005157 5.7e-23 110.5 68 77.9
CiPaw.03G220000 Carya illinoinensis HOM05D004235 ORTHO05D005157 5.7e-23 110.5 68 76.5
Nn8g38947 Nelumbo nucifera HOM05D004235 ORTHO05D005157 5.7e-23 110.5 69 73.9
Phvul.002G305500 Phaseolus vulgaris HOM05D004235 ORTHO05D005157 5.7e-23 110.5 68 72.1
TWI63G1589 Tripterygium wilfordii HOM05D004235 ORTHO05D005157 5.7e-23 110.5 68 76.5
VMungo0251G2139 Vigna mungo HOM05D004235 ORTHO05D005157 5.7e-23 110.5 68 72.1
Ca_17388_v3 Cicer arietinum L. HOM05D004235 ORTHO05D005157 7.4e-23 110.2 68 73.5
HanXRQChr04g0112481 Helianthus annuus HOM05D004235 ORTHO05D005157 7.4e-23 110.2 68 73.5
Oeu052124.2 Olea europaea HOM05D004235 ORTHO05D005157 7.4e-23 110.2 68 75.0
Psat7g019200 Pisum sativum HOM05D004235 ORTHO05D005157 7.4e-23 110.2 68 72.1
TPR.G25478 Trifolium pratense HOM05D004235 ORTHO05D005157 7.4e-23 110.2 68 72.1
MELO3C004614.2 Cucumis melo HOM05D004235 ORTHO05D005157 9.6e-23 109.8 68 75.0
CsaV3_2G001610 Cucumis sativus L. HOM05D004235 ORTHO05D005157 9.6e-23 109.8 68 75.0
FAN26G2547 Fragaria x ananassa HOM05D004235 ORTHO05D005157 9.6e-23 109.8 68 76.5
Medtr8g101950 Medicago truncatula HOM05D004235 ORTHO05D005157 9.6e-23 109.8 68 72.1
RcHm_v2.0_Chr2g0092561 Rosa chinensis HOM05D004235 ORTHO05D005157 9.6e-23 109.8 68 76.5
vmacro06271 Vaccinium macrocarpon HOM05D004235 ORTHO05D005157 9.6e-23 109.8 68 73.5
Aqoxy7G01320 Aquilegia oxysepala HOM05D004235 ORTHO05D005157 1.3e-22 109.4 68 75.0
ClCG11G001880 Citrullus lanatus HOM05D004235 ORTHO05D005157 1.6e-22 109.0 68 73.5
Eucgr.C03689 Eucalyptus grandis HOM05D004235 ORTHO05D005157 1.6e-22 109.0 68 75.0
Glyma.08G030800 Glycine max HOM05D004235 ORTHO05D005157 1.6e-22 109.0 68 70.6
GSVIVG01015250001 Vitis vinifera HOM05D004235 ORTHO05D005157 1.6e-22 109.0 68 75.0
CSS0028903 Camellia sinensis var. sinensis HOM05D004235 ORTHO05D005157 2.8e-22 108.2 68 75.0
Migut.J00436 Erythranthe guttata HOM05D004235 ORTHO05D005157 2.8e-22 108.2 68 73.5
Lj4g0008017 Lotus japonicus HOM05D004235 ORTHO05D005157 2.8e-22 108.2 68 70.6
ECA236G4919 Erigeron canadensis HOM05D004235 ORTHO05D005157 3.7e-22 107.8 68 72.1
Lsat_1_v5_gn_8_88100 Lactuca sativa HOM05D004235 ORTHO05D005157 3.7e-22 107.8 68 72.1
PSO832G0536 Papaver somniferum HOM05D004235 ORTHO05D005157 3.7e-22 107.8 68 75.0
Rhsim03G0234900 Rhododendron simsii HOM05D004235 ORTHO05D005157 3.7e-22 107.8 68 72.1
Glyma.05G223700 Glycine max HOM05D004235 ORTHO05D005157 4.8e-22 107.5 68 69.1
MD15G1202300 Malus domestica HOM05D004235 ORTHO05D005157 6.3e-22 107.1 68 73.5
arahy.Tifrunner.gnm1.ann1.00M5T5 Arachis hypogaea HOM05D004235 ORTHO05D005157 8.2e-22 106.7 68 69.1
arahy.Tifrunner.gnm1.ann1.VZDV7L Arachis hypogaea HOM05D004235 ORTHO05D005157 8.2e-22 106.7 68 69.1
Cfa003136 Carpinus fangiana HOM05D004235 ORTHO05D005157 8.2e-22 106.7 68 72.1
PGR102G2758 Punica granatum HOM05D004235 ORTHO05D005157 8.2e-22 106.7 68 73.5
PSO063G2511 Papaver somniferum HOM05D004235 ORTHO05D005157 1.1e-21 106.3 68 73.5
CSS0008185 Camellia sinensis var. sinensis HOM05D004235 ORTHO05D005157 1.8e-21 105.5 68 73.5
Haze_25867 Corylus avellana HOM05D004235 ORTHO05D005157 1.8e-21 105.5 68 70.6
DCAR_028630 Daucus carota HOM05D004235 ORTHO05D005157 1.8e-21 105.5 68 73.5
AUR62027475 Chenopodium quinoa HOM05D004235 ORTHO05D005157 2.4e-21 105.1 64 75.0
Hund06688 Selenicereus undatus HOM05D004235 ORTHO05D005157 3.1e-21 104.8 68 75.0
AUR62034005 Chenopodium quinoa HOM05D004235 ORTHO05D005157 4.1e-21 104.4 64 75.0
SGA_v2.0_scaffold62G21574 Striga asiatica HOM05D004235 ORTHO05D005157 4.1e-21 104.4 68 70.6
Zm00001eb162240 Zea mays HOM05D004235 ORTHO05D005157 9.0e-21 103.2 67 68.7
EL10Ac8g19244 Beta vulgaris HOM05D004235 ORTHO05D005157 2.0e-20 102.1 63 74.6
COL.COLO4_18248 Corchorus olitorius HOM05D004235 ORTHO05D005157 3.4e-20 101.3 68 69.1
SMO268G0025 Selaginella moellendorffii HOM05D004235 ORTHO05D005157 4.5e-20 100.9 68 64.7
Migut.J00437 Erythranthe guttata HOM05D004235 ORTHO05D005157 5.9e-20 100.5 68 72.1
Thecc.09G094500 Theobroma cacao HOM05D004235 ORTHO05D005157 5.9e-20 100.5 68 72.1
Pp3c19_10200 Physcomitrium patens HOM05D004235 ORTHO05D005157 1.0e-19 99.8 69 62.3
Gohir.A08G244500 Gossypium hirsutum HOM05D004235 ORTHO05D005157 1.7e-19 99.0 68 70.6
Gohir.D08G265400 Gossypium hirsutum HOM05D004235 ORTHO05D005157 1.7e-19 99.0 68 70.6
Gorai.004G283400 Gossypium raimondii HOM05D004235 ORTHO05D005157 1.7e-19 99.0 68 70.6
Duzib150G0514 Durio zibethinus HOM05D004235 ORTHO05D005157 2.2e-19 98.6 68 67.6
Mapoly0007s0115 Marchantia polymorpha HOM05D004235 ORTHO05D005157 2.9e-19 98.2 68 67.6
Duzib168G1665 Durio zibethinus HOM05D004235 ORTHO05D005157 5.0e-19 97.4 68 69.1
Sc18g0001680 Simmondsia chinensis HOM05D004235 ORTHO05D005157 5.0e-19 97.4 68 66.2
Thecc.09G094600 Theobroma cacao HOM05D004235 ORTHO05D005157 6.5e-19 97.1 68 66.2
HPP92_009154 Vanilla planifolia HOM05D004235 ORTHO05D005157 6.5e-19 97.1 68 63.2
Sc18g0001660 Simmondsia chinensis HOM05D004235 ORTHO05D005157 1.9e-18 95.5 68 61.8
EL10Ac8g18336 Beta vulgaris HOM05D004235 ORTHO05D005157 5.5e-18 94.0 68 60.3
Hund09051 Selenicereus undatus HOM05D004235 ORTHO05D005157 7.2e-18 93.6 67 64.2
unitig_26.g9162 Utricularia gibba HOM05D004235 ORTHO05D005157 1.6e-17 92.4 68 63.2
Ah.09g230260 Amaranthus hybridus HOM05D004235 ORTHO05D005157 2.1e-17 92.0 68 63.2
COL.COLO4_18247 Corchorus olitorius HOM05D004235 ORTHO05D005157 2.7e-17 91.7 69 65.2
AUR62021351 Chenopodium quinoa HOM05D004235 ORTHO05D005157 7.9e-17 90.1 62 64.5
COL.COLO4_18245 Corchorus olitorius HOM05D004235 ORTHO05D005157 7.9e-17 90.1 68 67.6
Pp3c22_21190 Physcomitrium patens HOM05D004235 ORTHO05D005157 1.0e-16 89.7 68 60.3
AUR62033265 Chenopodium quinoa HOM05D004235 ORTHO05D005157 1.8e-16 89.0 68 57.4
COL.COLO4_18244 Corchorus olitorius HOM05D004235 ORTHO05D005157 5.1e-16 87.4 67 65.7
CBR_g39508 Chara braunii HOM05D004235 ORTHO05D005157 6.7e-16 87.0 57 70.2
MCO05G244 Micromonas commoda HOM05D004235 ORTHO05D005157 5.5e-10 67.4 68 48.5
PGSC0003DMG400037643 Solanum tuberosum HOM05D004235 ORTHO05D005157 3.9e-08 61.2 68 47.1
Lalb_Chr09g0331751 Lupinus albus HOM05D004235 ORTHO05D005157 3.3e-07 58.2 35 71.4
RcHm_v2.0_Chr2g0091881 Rosa chinensis HOM05D004235 ORTHO05D005157 1.7e-06 55.8 35 74.3
SEGI_40851 Sequoiadendron giganteum HOM05D004235 ORTHO05D005157 1.7e-06 55.8 35 65.7


User provided reference genes

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