Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG3G11010 Aethionema arabicum HOM05D004902 ORTHO05D006603 0.0e+00 1173.3 593 100.0
CARHR234510 Cardamine hirsuta HOM05D004902 ORTHO05D006603 6.4e-308 1060.1 596 90.1
Sp7g24850 Schrenkiella parvula HOM05D004902 ORTHO05D006603 1.0e-305 1052.7 593 89.7
AL7G25950 Arabidopsis lyrata HOM05D004902 ORTHO05D006603 1.9e-304 1048.5 595 89.4
Thhalv10024744m.g Eutrema salsugineum HOM05D004902 ORTHO05D006603 4.7e-303 1043.9 596 88.8
Carub.0007s1395 Capsella rubella HOM05D004902 ORTHO05D006603 5.2e-302 1040.4 593 88.9
C01p23080 Brassica napus HOM05D004902 ORTHO05D006603 1.2e-301 1039.3 593 88.4
AT4G26900 Arabidopsis thaliana HOM05D004902 ORTHO05D006603 3.4e-301 1037.7 595 88.6
BolC1t02242H Brassica oleracea HOM05D004902 ORTHO05D006603 9.9e-301 1036.2 595 88.2
C04p45770 Brassica napus HOM05D004902 ORTHO05D006603 1.1e-294 1016.1 593 87.5
BolC4t26162H Brassica oleracea HOM05D004902 ORTHO05D006603 3.4e-293 1011.1 595 87.2
BcaB06g27301 Brassica carinata HOM05D004902 ORTHO05D006603 4.5e-293 1010.7 593 87.0
A04p12110 Brassica napus HOM05D004902 ORTHO05D006603 1.1e-291 1006.1 596 86.9
THA.LOC104811618 Tarenaya hassleriana HOM05D004902 ORTHO05D006603 1.1e-291 1006.1 585 86.7
BcaNung03568 Brassica carinata HOM05D004902 ORTHO05D006603 2.3e-289 998.4 595 86.2
BraA04t16876Z Brassica rapa HOM05D004902 ORTHO05D006603 9.3e-283 976.5 624 82.9
TWI39G0824 Tripterygium wilfordii HOM05D004902 ORTHO05D006603 2.1e-282 975.3 567 85.4
Gohir.A11G067600 Gossypium hirsutum HOM05D004902 ORTHO05D006603 4.8e-279 964.1 594 82.2
Gohir.D11G071500 Gossypium hirsutum HOM05D004902 ORTHO05D006603 6.9e-278 960.3 594 81.6
Dinv40776 Davidia involucrata HOM05D004902 ORTHO05D006603 2.0e-277 958.7 578 82.7
Cfa020314 Carpinus fangiana HOM05D004902 ORTHO05D006603 4.5e-277 957.6 593 81.5
GSVIVG01037683001 Vitis vinifera HOM05D004902 ORTHO05D006603 1.3e-276 956.1 585 81.9
Gorai.007G076800 Gossypium raimondii HOM05D004902 ORTHO05D006603 1.7e-276 955.7 594 81.1
MELO3C013152.2 Cucumis melo HOM05D004902 ORTHO05D006603 3.8e-276 954.5 569 84.0
Prupe.4G217200 Prunus persica HOM05D004902 ORTHO05D006603 2.5e-275 951.8 572 83.2
ClCG09G010930 Citrullus lanatus HOM05D004902 ORTHO05D006603 3.2e-275 951.4 581 82.6
QL08p009339 Quercus lobata HOM05D004902 ORTHO05D006603 7.1e-275 950.3 594 80.5
Manes.03G132000 Manihot esculenta HOM05D004902 ORTHO05D006603 1.2e-274 949.5 584 82.0
Potri.001G267400 Populus trichocarpa HOM05D004902 ORTHO05D006603 1.2e-274 949.5 570 82.8
CiPaw.11G191900 Carya illinoinensis HOM05D004902 ORTHO05D006603 2.7e-274 948.3 598 80.4
Ciclev10007818m.g Citrus clementina HOM05D004902 ORTHO05D006603 2.7e-274 948.3 594 80.8
Glyma.18G093200 Glycine max HOM05D004902 ORTHO05D006603 6.0e-274 947.2 576 82.8
Hma1.2p1_0036F.1_g023440 Hydrangea macrophylla HOM05D004902 ORTHO05D006603 6.0e-274 947.2 593 79.8
Lalb_Chr10g0107081 Lupinus albus HOM05D004902 ORTHO05D006603 7.9e-274 946.8 560 84.1
Sopen07g033000 Solanum pennellii HOM05D004902 ORTHO05D006603 1.0e-273 946.4 594 80.1
Eucgr.F00742 Eucalyptus grandis HOM05D004902 ORTHO05D006603 1.3e-273 946.0 594 80.1
Medtr3g052850 Medicago truncatula HOM05D004902 ORTHO05D006603 3.0e-273 944.9 573 82.0
Sed0009199 Sechium edule HOM05D004902 ORTHO05D006603 3.0e-273 944.9 598 80.8
TPR.G33794 Trifolium pratense HOM05D004902 ORTHO05D006603 3.9e-273 944.5 571 81.8
CSS0007833 Camellia sinensis var. sinensis HOM05D004902 ORTHO05D006603 5.1e-273 944.1 560 83.9
PGSC0003DMG400022211 Solanum tuberosum HOM05D004902 ORTHO05D006603 5.1e-273 944.1 594 80.0
Glyma.18G108300 Glycine max HOM05D004902 ORTHO05D006603 8.7e-273 943.3 575 82.3
Phvul.006G046400 Phaseolus vulgaris HOM05D004902 ORTHO05D006603 8.7e-273 943.3 580 81.7
SGA_v2.0_scaffold172G39008 Striga asiatica HOM05D004902 ORTHO05D006603 8.7e-273 943.3 573 82.7
Solyc07g064810.3 Solanum lycopersicum HOM05D004902 ORTHO05D006603 1.1e-272 943.0 594 80.0
CANSAT11G1621 Cannabis sativa HOM05D004902 ORTHO05D006603 1.5e-272 942.6 593 80.3
TAR362G0117 Trochodendron aralioides HOM05D004902 ORTHO05D006603 9.6e-272 939.9 567 81.0
CAN.G337.72 Capsicum annuum HOM05D004902 ORTHO05D006603 1.3e-271 939.5 563 82.9
MD03G1198000 Malus domestica HOM05D004902 ORTHO05D006603 1.3e-271 939.5 593 80.4
Psat5g177120 Pisum sativum HOM05D004902 ORTHO05D006603 1.6e-271 939.1 572 81.6
Potri.009G061700 Populus trichocarpa HOM05D004902 ORTHO05D006603 1.6e-271 939.1 594 80.0
CSS0000094 Camellia sinensis var. sinensis HOM05D004902 ORTHO05D006603 2.1e-271 938.7 560 83.4
Actinidia10742 Actinidia chinensis HOM05D004902 ORTHO05D006603 6.3e-271 937.2 617 77.8
Atru.chr2.3483 Acer truncatum HOM05D004902 ORTHO05D006603 2.4e-270 935.3 592 80.4
Ca_14752_v3 Cicer arietinum L. HOM05D004902 ORTHO05D006603 2.4e-270 935.3 593 80.4
arahy.Tifrunner.gnm1.ann1.67NMHM Arachis hypogaea HOM05D004902 ORTHO05D006603 4.1e-270 934.5 599 80.3
Lj4g0024994 Lotus japonicus HOM05D004902 ORTHO05D006603 4.1e-270 934.5 548 84.7
RcHm_v2.0_Chr5g0040671 Rosa chinensis HOM05D004902 ORTHO05D006603 9.0e-270 933.3 572 82.2
Duzib264G0382 Durio zibethinus HOM05D004902 ORTHO05D006603 1.5e-269 932.6 572 81.8
Migut.M01740 Erythranthe guttata HOM05D004902 ORTHO05D006603 1.5e-269 932.6 575 80.7
Thecc.09G123200 Theobroma cacao HOM05D004902 ORTHO05D006603 2.6e-269 931.8 569 82.2
MSTRG.12985 Avicennia marina HOM05D004902 ORTHO05D006603 4.5e-269 931.0 585 80.0
MSTRG.14441 Avicennia marina HOM05D004902 ORTHO05D006603 1.3e-268 929.5 549 83.8
Lj1A876G36 Lonicera japonica HOM05D004902 ORTHO05D006603 2.9e-268 928.3 601 78.7
arahy.Tifrunner.gnm1.ann1.E3581I Arachis hypogaea HOM05D004902 ORTHO05D006603 6.5e-268 927.2 591 80.4
Lsat_1_v5_gn_5_3021 Lactuca sativa HOM05D004902 ORTHO05D006603 1.9e-267 925.6 573 80.5
Aqoxy5G00324 Aquilegia oxysepala HOM05D004902 ORTHO05D006603 1.2e-266 922.9 569 80.8
Sc02g0003710 Simmondsia chinensis HOM05D004902 ORTHO05D006603 2.7e-266 921.8 581 79.7
Oeu062577.2 Olea europaea HOM05D004902 ORTHO05D006603 3.6e-266 921.4 567 81.5
Hund26666 Selenicereus undatus HOM05D004902 ORTHO05D006603 3.6e-266 921.4 579 79.4
FAN18G4155 Fragaria x ananassa HOM05D004902 ORTHO05D006603 4.6e-266 921.0 576 81.1
PGR083G1168 Punica granatum HOM05D004902 ORTHO05D006603 4.6e-266 921.0 595 79.2
HanXRQChr05g0159411 Helianthus annuus HOM05D004902 ORTHO05D006603 6.1e-266 920.6 594 79.0
COL.COLO4_19537 Corchorus olitorius HOM05D004902 ORTHO05D006603 6.7e-265 917.1 574 80.7
HanXRQChr08g0233501 Helianthus annuus HOM05D004902 ORTHO05D006603 6.7e-265 917.1 577 80.1
FAN04G1963 Fragaria x ananassa HOM05D004902 ORTHO05D006603 2.2e-263 912.1 604 78.5
ECA246G3742 Erigeron canadensis HOM05D004902 ORTHO05D006603 2.4e-262 908.7 556 81.7
FAN13G3021 Fragaria x ananassa HOM05D004902 ORTHO05D006603 3.1e-262 908.3 616 76.6
CDE02G3624 Ceratophyllum demersum HOM05D004902 ORTHO05D006603 3.4e-261 904.8 591 77.3
EL10Ac1g01638 Beta vulgaris HOM05D004902 ORTHO05D006603 2.7e-258 895.2 596 75.0
Nn8g38868 Nelumbo nucifera HOM05D004902 ORTHO05D006603 4.6e-258 894.4 550 80.7
AUR62026758 Chenopodium quinoa HOM05D004902 ORTHO05D006603 1.0e-257 893.3 588 76.7
Haze_09705 Corylus avellana HOM05D004902 ORTHO05D006603 1.5e-256 889.4 593 76.7
ATR0736G184 Amborella trichopoda HOM05D004902 ORTHO05D006603 2.6e-256 888.6 594 76.6
Rhsim06G0219700 Rhododendron simsii HOM05D004902 ORTHO05D006603 2.4e-254 882.1 585 75.9
Oeu013136.2 Olea europaea HOM05D004902 ORTHO05D006603 3.8e-252 874.8 630 73.0
Gorai.011G209600 Gossypium raimondii HOM05D004902 ORTHO05D006603 1.9e-251 872.5 551 80.2
HPP92_013494 Vanilla planifolia HOM05D004902 ORTHO05D006603 5.5e-251 870.9 545 77.8
Gohir.D10G186800 Gossypium hirsutum HOM05D004902 ORTHO05D006603 1.8e-249 865.9 551 79.7
HPP92_026047 Vanilla planifolia HOM05D004902 ORTHO05D006603 1.1e-248 863.2 539 78.1
Sabra16G0163900 Salix brachista HOM05D004902 ORTHO05D006603 2.8e-247 858.6 660 68.9
FAN08G0007 Fragaria x ananassa HOM05D004902 ORTHO05D006603 2.0e-245 852.4 594 75.3
vmacro02220 Vaccinium macrocarpon HOM05D004902 ORTHO05D006603 5.0e-244 847.8 591 74.8
Os03g0256400 Oryza sativa ssp. japonica HOM05D004902 ORTHO05D006603 6.5e-244 847.4 554 74.9
PSO210G2842 Papaver somniferum HOM05D004902 ORTHO05D006603 7.2e-243 844.0 571 75.8
PSO832G3378 Papaver somniferum HOM05D004902 ORTHO05D006603 9.4e-243 843.6 583 75.0
FvH4_5g29730 Fragaria vesca HOM05D004902 ORTHO05D006603 4.8e-239 831.2 479 85.4
Gohir.A10G179900 Gossypium hirsutum HOM05D004902 ORTHO05D006603 1.1e-238 830.1 609 73.1
Peaxi162Scf00235g00424 Petunia axillaris HOM05D004902 ORTHO05D006603 2.4e-238 828.9 576 74.0
Ah.13g076200 Amaranthus hybridus HOM05D004902 ORTHO05D006603 4.5e-237 824.7 595 72.4
CsaV3_7G021940 Cucumis sativus L. HOM05D004902 ORTHO05D006603 1.0e-236 823.5 514 80.7
AagrBONN_evm.TU.Sc2ySwM_117.3547 Anthoceros agrestis HOM05D004902 ORTHO05D006603 1.1e-235 820.1 551 73.7
DCAR_022578 Daucus carota HOM05D004902 ORTHO05D006603 6.5e-228 794.3 552 72.8
Nitab4.5_0022774g0010 Nicotiana tabacum HOM05D004902 ORTHO05D006603 1.2e-226 790.0 463 83.6
Mapoly0071s0086 Marchantia polymorpha HOM05D004902 ORTHO05D006603 1.5e-224 783.1 546 70.9
Pp3c1_20280 Physcomitrium patens HOM05D004902 ORTHO05D006603 4.4e-224 781.6 608 66.6
CBR_g4356 Chara braunii HOM05D004902 ORTHO05D006603 2.2e-223 779.2 558 69.4
Hma1.2p1_0036F.1_g023430 Hydrangea macrophylla HOM05D004902 ORTHO05D006603 3.6e-218 761.9 484 78.1
SMO119G0352 Selaginella moellendorffii HOM05D004902 ORTHO05D006603 6.1e-218 761.1 532 70.5
AUR62013514 Chenopodium quinoa HOM05D004902 ORTHO05D006603 2.3e-209 732.6 594 66.0
unitig_85.g27329 Utricularia gibba HOM05D004902 ORTHO05D006603 2.7e-205 719.2 549 69.0
Nitab4.5_0013139g0010 Nicotiana tabacum HOM05D004902 ORTHO05D006603 1.2e-189 667.2 405 82.7
CAN.G677.16 Capsicum annuum HOM05D004902 ORTHO05D006603 3.5e-189 665.6 523 67.7
MCO02G311 Micromonas commoda HOM05D004902 ORTHO05D006603 4.3e-187 658.7 540 60.6
A01p18110 Brassica napus HOM05D004902 ORTHO05D006603 2.1e-178 629.8 554 63.9
PRCOL_00006765 Prasinoderma coloniale HOM05D004902 ORTHO05D006603 6.2e-162 575.1 510 58.2
HanXRQChr08g0233821 Helianthus annuus HOM05D004902 ORTHO05D006603 1.1e-161 574.3 406 73.9
MD11G1214000 Malus domestica HOM05D004902 ORTHO05D006603 9.0e-161 571.2 341 85.0
Cfa025092 Carpinus fangiana HOM05D004902 ORTHO05D006603 7.1e-158 561.6 544 54.2
Zm00001eb011150 Zea mays HOM05D004902 ORTHO05D006603 1.2e-157 560.8 356 79.2
Cre11.g481500 Chlamydomonas reinhardtii HOM05D004902 ORTHO05D006603 5.5e-134 482.3 563 48.0
Cpa.g.sc12.277 Carica papaya HOM05D004902 ORTHO05D006603 2.2e-127 460.3 257 88.3
Cpa.g.c34168 Carica papaya HOM05D004902 ORTHO05D006603 7.0e-105 385.6 251 77.7
MD11G1213900 Malus domestica HOM05D004902 ORTHO05D006603 1.9e-89 334.3 188 82.4
Lsat_1_v5_gn_3_2301 Lactuca sativa HOM05D004902 ORTHO05D006603 1.6e-72 278.1 376 46.3
Glyma.08G323300 Glycine max HOM05D004902 ORTHO05D006603 5.8e-67 259.6 208 63.0
Zm00001eb081410 Zea mays HOM05D004902 ORTHO05D006603 7.9e-56 222.6 198 56.6
SEGI_16435 Sequoiadendron giganteum HOM05D004902 ORTHO05D006603 4.8e-45 186.8 116 80.2
BraA01t01766Z Brassica rapa HOM05D004902 ORTHO05D006603 1.1e-44 185.7 102 89.2
VMungo0540G1125 Vigna mungo HOM05D004902 ORTHO05D006603 6.9e-44 183.0 145 69.0
RcHm_v2.0_Chr4g0412471 Rosa chinensis HOM05D004902 ORTHO05D006603 6.5e-42 176.4 152 65.1
SEGI_31768 Sequoiadendron giganteum HOM05D004902 ORTHO05D006603 1.1e-36 159.1 118 63.6
Aqoxy84s005 Aquilegia oxysepala HOM05D004902 ORTHO05D038539 2.5e-30 137.9 314 32.8
Glyma.08G319400 Glycine max HOM05D004902 ORTHO05D029739 5.9e-27 126.7 76 84.2
Lsat_1_v5_gn_0_44000 Lactuca sativa HOM05D004902 ORTHO05D038539 1.0e-26 125.9 312 33.3
BcaNung03560 Brassica carinata HOM05D004902 ORTHO05D006603 3.1e-20 104.4 84 65.5
BcaNung03565 Brassica carinata HOM05D004902 ORTHO05D006603 4.5e-19 100.5 93 66.7
FvH4_6g25500 Fragaria vesca HOM05D000003 ORTHO05D000007 1.1e-17 95.9 58 82.8
Ah.01g018890 Amaranthus hybridus HOM05D004902 ORTHO05D006603 4.7e-16 90.5 156 41.0
SEGI_35364 Sequoiadendron giganteum HOM05D004902 ORTHO05D025756 4.1e-12 77.4 46 67.4
TPR.G39977 Trifolium pratense HOM05D004902 ORTHO05D006603 1.2e-11 75.9 43 76.7
Lsat_1_v5_gn_3_69341 Lactuca sativa HOM05D004902 ORTHO05D006603 2.0e-11 75.1 125 40.8
Lsat_1_v5_gn_4_11281 Lactuca sativa HOM05D004902 ORTHO05D006603 2.6e-11 74.7 106 45.3
TWI38G0888 Tripterygium wilfordii HOM05D004902 ORTHO05D029739 7.2e-09 66.6 97 44.3
GSVIVG01021644001 Vitis vinifera HOM05D004902 ORTHO05D024725 1.6e-08 65.5 36 75.0
HanXRQChr08g0233831 Helianthus annuus HOM05D004902 ORTHO05D006603 2.1e-08 65.1 42 73.8
RcHm_v2.0_Chr5g0040621 Rosa chinensis HOM05D004902 ORTHO05D006603 2.3e-07 61.6 37 81.1
Lsat_1_v5_gn_0_720 Lactuca sativa HOM05D004902 ORTHO05D029739 2.0e-06 58.5 55 58.2
Lsat_1_v5_gn_2_18401 Lactuca sativa HOM05D004902 ORTHO05D233888 9.7e-06 56.2 134 34.3


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