Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG3G1100 Aethionema arabicum HOM05D004651 ORTHO05D005761 6.0e-49 197.2 101 100.0
Aa31LG1G23980 Aethionema arabicum HOM05D004651 ORTHO05D005761 1.3e-22 109.8 113 61.1
AL4G40670 Arabidopsis lyrata HOM05D004651 ORTHO05D005761 2.4e-21 105.5 113 57.5
AT2G42310 Arabidopsis thaliana HOM05D004651 ORTHO05D005761 2.4e-21 105.5 113 57.5
Carub.0004s2465 Capsella rubella HOM05D004651 ORTHO05D005761 2.4e-21 105.5 113 57.5
Sp4g24480 Schrenkiella parvula HOM05D004651 ORTHO05D005761 2.4e-21 105.5 113 57.5
Thhalv10017449m.g Eutrema salsugineum HOM05D004651 ORTHO05D005761 3.1e-21 105.1 113 57.5
CARHR137350 Cardamine hirsuta HOM05D004651 ORTHO05D005761 1.2e-20 103.2 114 56.1
THA.LOC104819088 Tarenaya hassleriana HOM05D004651 ORTHO05D005761 3.4e-20 101.7 116 56.0
Thhalv10006322m.g Eutrema salsugineum HOM05D004651 ORTHO05D005761 1.3e-19 99.8 114 55.3
BraA05t19275Z Brassica rapa HOM05D004651 ORTHO05D005761 2.2e-19 99.0 112 57.1
A05p02830 Brassica napus HOM05D004651 ORTHO05D005761 5.0e-19 97.8 112 56.2
BcaC01g05307 Brassica carinata HOM05D004651 ORTHO05D005761 1.4e-18 96.3 114 54.4
THA.LOC104802364 Tarenaya hassleriana HOM05D004651 ORTHO05D005761 2.5e-18 95.5 113 54.0
AL5G39450 Arabidopsis lyrata HOM05D004651 ORTHO05D005761 4.2e-18 94.7 114 52.6
BcaB06g29236 Brassica carinata HOM05D004651 ORTHO05D005761 4.2e-18 94.7 115 53.0
BcaC02g07246 Brassica carinata HOM05D004651 ORTHO05D005761 4.2e-18 94.7 115 53.0
BcaNung04397 Brassica carinata HOM05D004651 ORTHO05D005761 4.2e-18 94.7 115 53.0
C04p03440 Brassica napus HOM05D004651 ORTHO05D005761 4.2e-18 94.7 115 55.7
BolC4t21980H Brassica oleracea HOM05D004651 ORTHO05D005761 4.2e-18 94.7 115 55.7
AT3G57785 Arabidopsis thaliana HOM05D004651 ORTHO05D005761 9.4e-18 93.6 112 52.7
BcaC02g12474 Brassica carinata HOM05D004651 ORTHO05D005761 1.2e-17 93.2 115 55.7
Carub.0005s2464 Capsella rubella HOM05D004651 ORTHO05D005761 1.2e-17 93.2 114 52.6
A04p32130 Brassica napus HOM05D004651 ORTHO05D005761 7.9e-17 90.5 113 52.2
BcaC02g07250 Brassica carinata HOM05D004651 ORTHO05D005761 1.4e-16 89.7 113 52.2
C04p69620 Brassica napus HOM05D004651 ORTHO05D005761 1.4e-16 89.7 113 52.2
BolC4t28461H Brassica oleracea HOM05D004651 ORTHO05D005761 1.4e-16 89.7 113 52.2
Aa31LG10G12520 Aethionema arabicum HOM05D004651 ORTHO05D005761 1.8e-16 89.4 114 50.9
A03p23620 Brassica napus HOM05D004651 ORTHO05D005761 3.0e-16 88.6 113 53.1
BraA04t18667Z Brassica rapa HOM05D004651 ORTHO05D005761 3.0e-16 88.6 113 51.3
BraA03t11578Z Brassica rapa HOM05D004651 ORTHO05D005761 5.1e-16 87.8 107 54.2
Sp5g04900 Schrenkiella parvula HOM05D004651 ORTHO05D005761 1.3e-14 83.2 114 49.1
Cpa.g.sc85.122 Carica papaya HOM05D004651 ORTHO05D005761 6.3e-14 80.9 102 50.0
Manes.09G030500 Manihot esculenta HOM05D004651 ORTHO05D005761 2.1e-09 65.9 109 42.2
Atru.chr1.949 Acer truncatum HOM05D004651 ORTHO05D005761 4.7e-09 64.7 92 44.6
Ciclev10006760m.g Citrus clementina HOM05D000001 ORTHO05D000003 4.7e-09 64.7 93 43.0
Eucgr.A02412 Eucalyptus grandis HOM05D000001 ORTHO05D000003 6.1e-09 64.3 97 43.3
Manes.08G047600 Manihot esculenta HOM05D004651 ORTHO05D005761 6.1e-09 64.3 109 43.1
CsaV3_4G011920 Cucumis sativus L. HOM05D004651 ORTHO05D005761 1.4e-08 63.2 104 41.3
Potri.006G056900 Populus trichocarpa HOM05D004651 ORTHO05D005761 1.4e-08 63.2 103 40.8
QL07p022191 Quercus lobata HOM05D004651 ORTHO05D005761 1.8e-08 62.8 111 38.7
Zm00001eb034850 Zea mays HOM05D004651 ORTHO05D005761 2.3e-08 62.4 109 38.5
ClCG04G000490 Citrullus lanatus HOM05D004651 ORTHO05D005761 3.0e-08 62.0 109 39.4
Haze_19923 Corylus avellana HOM05D004651 ORTHO05D005761 4.0e-08 61.6 110 39.1
Gohir.D11G330900 Gossypium hirsutum HOM05D004651 ORTHO05D005761 4.0e-08 61.6 99 41.4
Gorai.007G361600 Gossypium raimondii HOM05D004651 ORTHO05D005761 4.0e-08 61.6 99 41.4
Sabra16G0055100 Salix brachista HOM05D004651 ORTHO05D005761 5.2e-08 61.2 116 36.2
FvH4_6g22990 Fragaria vesca HOM05D004651 ORTHO05D005761 6.7e-08 60.8 104 41.3
Gohir.D11G330800 Gossypium hirsutum HOM05D004651 ORTHO05D005761 6.7e-08 60.8 102 39.2
PGR004G2434 Punica granatum HOM05D004651 ORTHO05D005761 6.7e-08 60.8 101 40.6
CiPaw.10G029700 Carya illinoinensis HOM05D004651 ORTHO05D005761 8.8e-08 60.5 109 39.4
Duzib128G1036 Durio zibethinus HOM05D004651 ORTHO05D005761 8.8e-08 60.5 95 44.2
Sed0027459 Sechium edule HOM05D004651 ORTHO05D005761 8.8e-08 60.5 109 39.4
HPP92_022788 Vanilla planifolia HOM05D004651 ORTHO05D005761 8.8e-08 60.5 121 38.0
Zm00001eb316630 Zea mays HOM05D004651 ORTHO05D005761 8.8e-08 60.5 111 37.8
FAN05G1131 Fragaria x ananassa HOM05D004651 ORTHO05D005761 1.1e-07 60.1 103 41.7
Psat6g130960 Pisum sativum HOM05D004651 ORTHO05D005761 1.1e-07 60.1 106 40.6
COL.COLO4_28721 Corchorus olitorius HOM05D004651 ORTHO05D005761 1.5e-07 59.7 100 41.0
MELO3C026725.2 Cucumis melo HOM05D004651 ORTHO05D005761 1.5e-07 59.7 104 39.4
Gohir.A11G313600 Gossypium hirsutum HOM05D004651 ORTHO05D005761 1.5e-07 59.7 102 39.2
CANSAT80G2258 Cannabis sativa HOM05D004651 ORTHO05D005761 2.0e-07 59.3 109 41.3
Sabra06G0040200 Salix brachista HOM05D004651 ORTHO05D005761 2.6e-07 58.9 108 38.9
Cfa016877 Carpinus fangiana HOM05D004651 ORTHO05D005761 3.3e-07 58.5 110 38.2
CDE05G0718 Ceratophyllum demersum HOM05D004651 ORTHO05D005761 3.3e-07 58.5 117 35.9
Ca_04847_v3 Cicer arietinum L. HOM05D004651 ORTHO05D005761 3.3e-07 58.5 104 40.4
FAN02G2491 Fragaria x ananassa HOM05D004651 ORTHO05D005761 3.3e-07 58.5 97 42.3
FAN09G0537 Fragaria x ananassa HOM05D004651 ORTHO05D005761 3.3e-07 58.5 103 40.8
Gorai.007G361500 Gossypium raimondii HOM05D004651 ORTHO05D005761 3.3e-07 58.5 102 38.2
Lalb_Chr02g0159821 Lupinus albus HOM05D004651 ORTHO05D005761 3.3e-07 58.5 110 40.0
Medtr1g059290 Medicago truncatula HOM05D004651 ORTHO05D005761 3.3e-07 58.5 103 40.8
Lalb_Chr21g0319241 Lupinus albus HOM05D004651 ORTHO05D005761 4.4e-07 58.2 113 36.3
DCAR_013570 Daucus carota HOM05D004651 ORTHO05D005761 5.7e-07 57.8 116 33.6
Gohir.A11G313700 Gossypium hirsutum HOM05D004651 ORTHO05D005761 5.7e-07 57.8 99 39.4
Lsat_1_v5_gn_9_27580 Lactuca sativa HOM05D004651 ORTHO05D005761 5.7e-07 57.8 115 34.8
Potri.016G051400 Populus trichocarpa HOM05D004651 ORTHO05D005761 5.7e-07 57.8 108 37.0
CDE05G0104 Ceratophyllum demersum HOM05D004651 ORTHO05D005761 7.5e-07 57.4 117 35.9
Duzib093G1593 Durio zibethinus HOM05D004651 ORTHO05D005761 7.5e-07 57.4 106 41.5
Lj5g0006028 Lotus japonicus HOM05D004651 ORTHO05D005761 7.5e-07 57.4 118 36.4
Sc19g0006860 Simmondsia chinensis HOM05D004651 ORTHO05D005761 7.5e-07 57.4 105 34.3
MD12G1064300 Malus domestica HOM05D004651 ORTHO05D005761 9.7e-07 57.0 105 41.0
MD14G1064400 Malus domestica HOM05D004651 ORTHO05D005761 9.7e-07 57.0 98 40.8
PSO384G0298 Papaver somniferum HOM05D004651 ORTHO05D005761 9.7e-07 57.0 116 33.6
Phvul.007G256600 Phaseolus vulgaris HOM05D004651 ORTHO05D005761 9.7e-07 57.0 112 40.2
Prupe.7G069800 Prunus persica HOM05D004651 ORTHO05D005761 9.7e-07 57.0 105 41.0
Thecc.05G165000 Theobroma cacao HOM05D004651 ORTHO05D005761 9.7e-07 57.0 97 40.2
Cc06_g16440 Coffea canephora HOM05D004651 ORTHO05D005761 1.3e-06 56.6 109 40.4
Os08g0505001 Oryza sativa ssp. japonica HOM05D004651 ORTHO05D005761 1.3e-06 56.6 94 39.4
TWI34G0893 Tripterygium wilfordii HOM05D004651 ORTHO05D005761 1.3e-06 56.6 111 37.8
TWI34G1227 Tripterygium wilfordii HOM05D004651 ORTHO05D005761 1.3e-06 56.6 111 37.8
Dinv24113 Davidia involucrata HOM05D004651 ORTHO05D005761 1.7e-06 56.2 105 38.1
RcHm_v2.0_Chr3g0480781 Rosa chinensis HOM05D004651 ORTHO05D005761 1.7e-06 56.2 103 38.8
CiPaw.09G033900 Carya illinoinensis HOM05D004651 ORTHO05D005761 2.2e-06 55.8 108 38.0
MD07G1000900 Malus domestica HOM05D004651 ORTHO05D005761 2.2e-06 55.8 89 41.6
Os09g0487500 Oryza sativa ssp. japonica HOM05D004651 ORTHO05D005761 2.2e-06 55.8 79 41.8
Oeu033769.1 Olea europaea HOM05D004651 ORTHO05D005761 2.8e-06 55.5 116 35.3
TWI60G1376 Tripterygium wilfordii HOM05D004651 ORTHO05D005761 2.8e-06 55.5 111 37.8
PSO339G4089 Papaver somniferum HOM05D004651 ORTHO05D005761 3.7e-06 55.1 116 32.8
TAR623G0603 Trochodendron aralioides HOM05D004651 ORTHO05D005761 3.7e-06 55.1 120 35.0
Ah.04g152020 Amaranthus hybridus HOM05D004651 ORTHO05D005761 4.8e-06 54.7 111 35.1
C03p28150 Brassica napus HOM05D004651 ORTHO05D005761 6.3e-06 54.3 53 62.3
CSS0019774 Camellia sinensis var. sinensis HOM05D004651 ORTHO05D005761 6.3e-06 54.3 107 37.4
CSS0028305 Camellia sinensis var. sinensis HOM05D004651 ORTHO05D005761 6.3e-06 54.3 107 37.4
ECA236G1810 Erigeron canadensis HOM05D004651 ORTHO05D005761 6.3e-06 54.3 103 35.9
Hma1.2p1_0856F.1_g229150 Hydrangea macrophylla HOM05D004651 ORTHO05D005761 6.3e-06 54.3 105 38.1
EL10Ac3g06986 Beta vulgaris HOM05D004651 ORTHO05D005761 8.2e-06 53.9 117 34.2


User provided reference genes

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