Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG3G10880 Aethionema arabicum HOM05D009587 ORTHO05D004912 2.3e-61 238.8 131 100.0
Sp6g16920 Schrenkiella parvula HOM05D009587 ORTHO05D004912 4.6e-33 144.8 136 61.8
CARHR268310 Cardamine hirsuta HOM05D009587 ORTHO05D004912 2.3e-32 142.5 132 62.9
Thhalv10015018m.g Eutrema salsugineum HOM05D009587 ORTHO05D004912 9.6e-31 137.1 132 62.9
Carub.0007s1391 Capsella rubella HOM05D009587 ORTHO05D004912 3.1e-29 132.1 136 60.3
Sp7g24900 Schrenkiella parvula HOM05D009587 ORTHO05D004912 5.3e-29 131.3 132 61.4
AT4G26960 Arabidopsis thaliana HOM05D009587 ORTHO05D004912 1.7e-27 126.3 134 59.0
CARHR234560 Cardamine hirsuta HOM05D009587 ORTHO05D004912 2.2e-27 125.9 132 59.8
Carub.0008s1526 Capsella rubella HOM05D009587 ORTHO05D004912 4.9e-27 124.8 137 56.9
AL8G30440 Arabidopsis lyrata HOM05D009587 ORTHO05D004912 1.3e-24 116.7 138 54.3
AT5G54970 Arabidopsis thaliana HOM05D009587 ORTHO05D004912 1.5e-23 113.2 121 56.2
AL7G25880 Arabidopsis lyrata HOM05D009587 ORTHO05D004912 1.6e-22 109.8 99 62.6
C03p16740 Brassica napus HOM05D009587 ORTHO05D004912 2.1e-22 109.4 133 51.1
BcaC07g38259 Brassica carinata HOM05D009587 ORTHO05D004912 2.8e-22 109.0 125 54.4
C08p10050 Brassica napus HOM05D009587 ORTHO05D004912 2.8e-22 109.0 125 54.4
BolC8t48684H Brassica oleracea HOM05D009587 ORTHO05D004912 2.8e-22 109.0 125 54.4
A03p14360 Brassica napus HOM05D009587 ORTHO05D004912 3.7e-22 108.6 133 50.4
A08p20650 Brassica napus HOM05D009587 ORTHO05D004912 6.2e-22 107.8 126 52.4
BolC3t14094H Brassica oleracea HOM05D009587 ORTHO05D004912 8.1e-22 107.5 133 50.4
THA.LOC104813425 Tarenaya hassleriana HOM05D009587 ORTHO05D004912 8.1e-22 107.5 133 54.1
THA.LOC104817668 Tarenaya hassleriana HOM05D009587 ORTHO05D004912 8.1e-22 107.5 128 53.1
BraA03t10733Z Brassica rapa HOM05D009587 ORTHO05D004912 1.8e-21 106.3 134 50.7
BraA08t34019Z Brassica rapa HOM05D009587 ORTHO05D004912 4.0e-21 105.1 127 55.1
BcaC01g06332 Brassica carinata HOM05D009587 ORTHO05D004912 6.9e-21 104.4 129 49.6
BcaB03g12516 Brassica carinata HOM05D009587 ORTHO05D004912 1.0e-19 100.5 135 51.1
Cpa.g.sc12.298 Carica papaya HOM05D007398 ORTHO05D004912 1.7e-19 99.8 140 46.4
Aa31LG5G12020 Aethionema arabicum HOM05D009587 ORTHO05D004912 8.4e-19 97.4 130 49.2
BcaB01g04338 Brassica carinata HOM05D009587 ORTHO05D004912 3.5e-17 92.0 132 47.7
Manes.03G130000 Manihot esculenta HOM05D007398 ORTHO05D004912 1.3e-11 73.6 139 43.2
Manes.15G071300 Manihot esculenta HOM05D007398 ORTHO05D004912 5.0e-11 71.6 137 42.3
Thecc.07G035100 Theobroma cacao HOM05D007398 ORTHO05D004912 4.2e-10 68.6 138 39.1
QL08p033081 Quercus lobata HOM05D007398 ORTHO05D004912 1.6e-09 66.6 104 42.3
ClCG02G008700 Citrullus lanatus HOM05D007398 ORTHO05D004912 2.7e-09 65.9 131 34.4
Duzib213G1052 Durio zibethinus HOM05D007398 ORTHO05D004912 2.7e-09 65.9 145 36.6
QL07p015665 Quercus lobata HOM05D007398 ORTHO05D004912 3.5e-09 65.5 98 44.9
TAR626G0532 Trochodendron aralioides HOM05D007398 ORTHO05D004912 4.6e-09 65.1 122 36.1
Phvul.005G115200 Phaseolus vulgaris HOM05D007398 ORTHO05D004912 6.1e-09 64.7 111 36.9
TAR627G0987 Trochodendron aralioides HOM05D007398 ORTHO05D004912 1.8e-08 63.2 131 37.4
Cfa014400 Carpinus fangiana HOM05D007398 ORTHO05D004912 3.0e-08 62.4 134 39.6
Haze_12865 Corylus avellana HOM05D007398 ORTHO05D004912 3.9e-08 62.0 118 38.1
BcaB01g04337 Brassica carinata HOM05D009587 ORTHO05D004912 5.1e-08 61.6 54 59.3
Glyma.13G308800 Glycine max HOM05D007398 ORTHO05D004912 6.7e-08 61.2 104 40.4
Gohir.A01G080300 Gossypium hirsutum HOM05D007398 ORTHO05D004912 1.1e-07 60.5 144 38.2
Nn1g03511 Nelumbo nucifera HOM05D007398 ORTHO05D004912 1.1e-07 60.5 124 33.9
Gohir.D01G067500 Gossypium hirsutum HOM05D007398 ORTHO05D004912 1.9e-07 59.7 144 38.2
Dinv39711 Davidia involucrata HOM05D007398 ORTHO05D004912 2.5e-07 59.3 114 39.5
Gorai.002G089400 Gossypium raimondii HOM05D007398 ORTHO05D004912 2.5e-07 59.3 100 43.0
Sed0025347 Sechium edule HOM05D007398 ORTHO05D004912 2.5e-07 59.3 126 33.3
TAR629G1636 Trochodendron aralioides HOM05D007398 ORTHO05D004912 2.5e-07 59.3 131 35.1
PGR083G1220 Punica granatum HOM05D007398 ORTHO05D004912 5.7e-07 58.2 120 40.8
CiPaw.03G160000 Carya illinoinensis HOM05D007398 ORTHO05D004912 7.4e-07 57.8 133 35.3
MBI02_g21879_MAGBIO Magnolia biondii HOM05D007398 ORTHO05D004912 9.7e-07 57.4 98 39.8
TPR.G4189 Trifolium pratense HOM05D007398 ORTHO05D004912 1.6e-06 56.6 99 39.4
Manes.13G070200 Manihot esculenta HOM05D007398 ORTHO05D004912 2.2e-06 56.2 99 39.4
Ca_01601_v3 Cicer arietinum L. HOM05D007398 ORTHO05D004912 3.7e-06 55.5 100 40.0
ClCG00G003290 Citrullus lanatus HOM05D007398 ORTHO05D004912 3.7e-06 55.5 119 30.3
ClCG02G001930 Citrullus lanatus HOM05D007398 ORTHO05D004912 3.7e-06 55.5 119 30.3
Sed0017131 Sechium edule HOM05D007398 ORTHO05D004912 3.7e-06 55.5 130 36.2
Ciclev10017196m.g Citrus clementina HOM05D007398 ORTHO05D004912 4.8e-06 55.1 131 32.8
Actinidia03605 Actinidia chinensis HOM05D007398 ORTHO05D004912 6.3e-06 54.7 92 40.2
CSS0017183 Camellia sinensis var. sinensis HOM05D007398 ORTHO05D004912 6.3e-06 54.7 106 40.6
Oeu041920.1 Olea europaea HOM05D007398 ORTHO05D004912 8.2e-06 54.3 96 39.6
QL05p073125 Quercus lobata HOM05D007398 ORTHO05D004912 8.2e-06 54.3 105 40.0


User provided reference genes

Program Settings