Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG3G10790 Aethionema arabicum HOM05D005684 ORTHO05D007427 1.4e-142 509.6 256 100.0
Thhalv10014489m.g Eutrema salsugineum HOM05D005684 ORTHO05D007427 1.5e-133 479.6 256 94.9
Sp7g25020 Schrenkiella parvula HOM05D005684 ORTHO05D007427 5.9e-133 477.6 256 93.8
THA.LOC104817661 Tarenaya hassleriana HOM05D005684 ORTHO05D007427 1.1e-131 473.4 256 93.8
CARHR234690 Cardamine hirsuta HOM05D005684 ORTHO05D007427 1.4e-131 473.0 256 93.0
Carub.0007s1380 Capsella rubella HOM05D005684 ORTHO05D007427 1.9e-131 472.6 254 92.9
BcaC06g32714 Brassica carinata HOM05D005684 ORTHO05D007427 3.2e-131 471.9 256 92.2
Thhalv10026070m.g Eutrema salsugineum HOM05D005684 ORTHO05D007427 3.2e-131 471.9 256 92.2
BolC7t46008H Brassica oleracea HOM05D005684 ORTHO05D007427 1.6e-130 469.5 256 91.8
A01p18200 Brassica napus HOM05D005684 ORTHO05D007427 2.1e-130 469.2 256 91.8
BraA01t01775Z Brassica rapa HOM05D005684 ORTHO05D007427 2.1e-130 469.2 256 91.8
A03p57030 Brassica napus HOM05D005684 ORTHO05D007427 2.7e-130 468.8 256 91.8
C07p55040 Brassica napus HOM05D005684 ORTHO05D007427 2.7e-130 468.8 256 91.8
BraA03t14772Z Brassica rapa HOM05D005684 ORTHO05D007427 4.6e-130 468.0 256 91.4
AL7G25790 Arabidopsis lyrata HOM05D005684 ORTHO05D007427 7.9e-130 467.2 256 91.4
AT4G27040 Arabidopsis thaliana HOM05D005684 ORTHO05D007427 7.9e-130 467.2 256 91.4
BcaC09g50622 Brassica carinata HOM05D005684 ORTHO05D007427 1.9e-128 462.6 256 91.0
Aa31LG5G10350 Aethionema arabicum HOM05D005684 ORTHO05D007427 1.7e-124 449.5 303 78.2
Cpa.g.sc97.28 Carica papaya HOM05D005684 ORTHO05D007427 6.5e-124 447.6 256 87.1
Sopen10g002270 Solanum pennellii HOM05D005684 ORTHO05D007427 5.5e-123 444.5 255 86.7
Solyc10g006320.3 Solanum lycopersicum HOM05D005684 ORTHO05D007427 4.7e-122 441.4 255 85.9
PGSC0003DMG400014423 Solanum tuberosum HOM05D005684 ORTHO05D007427 6.1e-122 441.0 255 85.9
Manes.03G124800 Manihot esculenta HOM05D005684 ORTHO05D007427 7.9e-122 440.7 256 85.2
TPR.G16583 Trifolium pratense HOM05D005684 ORTHO05D007427 7.9e-122 440.7 255 84.3
Dinv22273 Davidia involucrata HOM05D005684 ORTHO05D007427 1.0e-121 440.3 255 85.5
Actinidia10725 Actinidia chinensis HOM05D005684 ORTHO05D007427 1.4e-121 439.9 255 84.3
Peaxi162Scf00387g00210 Petunia axillaris HOM05D005684 ORTHO05D007427 1.8e-121 439.5 255 84.7
Manes.15G073300 Manihot esculenta HOM05D005684 ORTHO05D007427 2.3e-121 439.1 254 84.3
Gohir.A01G078600 Gossypium hirsutum HOM05D005684 ORTHO05D007427 3.0e-121 438.7 256 85.5
Actinidia35335 Actinidia chinensis HOM05D005684 ORTHO05D007427 3.9e-121 438.3 255 83.9
FvH4_3g22390 Fragaria vesca HOM05D005684 ORTHO05D007427 3.9e-121 438.3 256 83.6
Ca_14720_v3 Cicer arietinum L. HOM05D005684 ORTHO05D007427 5.1e-121 438.0 255 83.9
Migut.H01837 Erythranthe guttata HOM05D005684 ORTHO05D007427 5.1e-121 438.0 254 84.3
Gohir.D01G065700 Gossypium hirsutum HOM05D005684 ORTHO05D007427 6.7e-121 437.6 256 85.2
Gorai.002G087600 Gossypium raimondii HOM05D005684 ORTHO05D007427 6.7e-121 437.6 256 85.2
Cc05_g13580 Coffea canephora HOM05D005684 ORTHO05D007427 8.8e-121 437.2 255 84.3
Nitab4.5_0005048g0050 Nicotiana tabacum HOM05D005684 ORTHO05D007427 8.8e-121 437.2 254 85.0
FAN21G0196 Fragaria x ananassa HOM05D005684 ORTHO05D007427 1.1e-120 436.8 256 83.2
TWI38G0783 Tripterygium wilfordii HOM05D005684 ORTHO05D007427 1.1e-120 436.8 247 86.2
MSTRG.12968 Avicennia marina HOM05D005684 ORTHO05D007427 1.5e-120 436.4 255 83.9
HanXRQChr11g0336331 Helianthus annuus HOM05D005684 ORTHO05D007427 1.5e-120 436.4 255 83.5
Potri.001G424600 Populus trichocarpa HOM05D005684 ORTHO05D007427 2.0e-120 436.0 247 86.2
RcHm_v2.0_Chr5g0039061 Rosa chinensis HOM05D005684 ORTHO05D007427 2.0e-120 436.0 256 83.2
Lj6g0016495 Lotus japonicus HOM05D005684 ORTHO05D007427 2.6e-120 435.6 256 83.2
arahy.Tifrunner.gnm1.ann1.A1QMDX Arachis hypogaea HOM05D005684 ORTHO05D007427 3.3e-120 435.3 256 83.6
arahy.Tifrunner.gnm1.ann1.G9AZJ3 Arachis hypogaea HOM05D005684 ORTHO05D007427 3.3e-120 435.3 256 83.6
Eucgr.F03458 Eucalyptus grandis HOM05D005684 ORTHO05D007427 4.4e-120 434.9 256 83.2
Lalb_Chr06g0171921 Lupinus albus HOM05D005684 ORTHO05D007427 4.4e-120 434.9 256 83.2
Medtr3g051210 Medicago truncatula HOM05D005684 ORTHO05D007427 4.4e-120 434.9 255 83.1
Ciclev10009283m.g Citrus clementina HOM05D005684 ORTHO05D007427 5.7e-120 434.5 256 83.6
ECA236G3763 Erigeron canadensis HOM05D005684 ORTHO05D007427 5.7e-120 434.5 255 83.9
Lsat_1_v5_gn_7_109480 Lactuca sativa HOM05D005684 ORTHO05D007427 9.7e-120 433.7 255 83.5
CANSAT21G0158 Cannabis sativa HOM05D005684 ORTHO05D007427 1.7e-119 433.0 254 82.3
Nn8g40268 Nelumbo nucifera HOM05D005684 ORTHO05D007427 2.2e-119 432.6 254 83.1
CiPaw.12G128600 Carya illinoinensis HOM05D005684 ORTHO05D007427 2.8e-119 432.2 247 85.4
Lj1A870G92 Lonicera japonica HOM05D005684 ORTHO05D007427 3.7e-119 431.8 255 83.1
FAN11G1729 Fragaria x ananassa HOM05D005684 ORTHO05D007427 6.3e-119 431.0 264 81.1
Duzib170G0103 Durio zibethinus HOM05D005684 ORTHO05D007427 8.2e-119 430.6 256 84.0
ATR0749G094 Amborella trichopoda HOM05D005684 ORTHO05D007427 1.8e-118 429.5 254 83.1
QL09p032912 Quercus lobata HOM05D005684 ORTHO05D007427 5.3e-118 427.9 246 86.2
Sc16g0006290 Simmondsia chinensis HOM05D005684 ORTHO05D007427 5.3e-118 427.9 255 82.4
VMungo0540G0423 Vigna mungo HOM05D005684 ORTHO05D007427 6.9e-118 427.6 256 81.6
MD03G1205400 Malus domestica HOM05D005684 ORTHO05D007427 9.1e-118 427.2 256 81.6
Glyma.08G314600 Glycine max HOM05D005684 ORTHO05D007427 1.2e-117 426.8 256 80.9
QL08p011467 Quercus lobata HOM05D005684 ORTHO05D007427 1.2e-117 426.8 246 86.6
ClCG10G005500 Citrullus lanatus HOM05D005684 ORTHO05D007427 1.5e-117 426.4 247 83.8
PSO170G3986 Papaver somniferum HOM05D005684 ORTHO05D007427 1.5e-117 426.4 245 85.7
GSVIVG01037615001 Vitis vinifera HOM05D005684 ORTHO05D007427 1.5e-117 426.4 254 84.3
Phvul.006G040700 Phaseolus vulgaris HOM05D005684 ORTHO05D007427 2.0e-117 426.0 256 81.6
COL.COLO4_09643 Corchorus olitorius HOM05D005684 ORTHO05D007427 2.6e-117 425.6 256 83.2
QL08p011589 Quercus lobata HOM05D005684 ORTHO05D007427 3.4e-117 425.2 246 86.2
CsaV3_3G005220 Cucumis sativus L. HOM05D005684 ORTHO05D007427 4.5e-117 424.9 256 81.2
TAR383G0098 Trochodendron aralioides HOM05D005684 ORTHO05D007427 5.9e-117 424.5 254 83.9
Glyma.18G099600 Glycine max HOM05D005684 ORTHO05D007427 7.7e-117 424.1 256 81.2
Sed0015085 Sechium edule HOM05D005684 ORTHO05D007427 7.7e-117 424.1 256 81.2
MD11G1221300 Malus domestica HOM05D005684 ORTHO05D007427 1.7e-116 422.9 254 81.1
Medtr7g033650 Medicago truncatula HOM05D005684 ORTHO05D007427 2.9e-116 422.2 255 81.2
PSO017G1132 Papaver somniferum HOM05D005684 ORTHO05D007427 2.9e-116 422.2 245 84.9
PGR031G1629 Punica granatum HOM05D005684 ORTHO05D007427 2.9e-116 422.2 256 81.6
Aqoxy7G03212 Aquilegia oxysepala HOM05D005684 ORTHO05D007427 5.0e-116 421.4 245 84.1
vmacro09729 Vaccinium macrocarpon HOM05D005684 ORTHO05D007427 1.4e-115 419.9 275 77.1
Sabra16G0288400 Salix brachista HOM05D005684 ORTHO05D007427 2.5e-115 419.1 296 72.6
SGA_v2.0_scaffold9G05066 Striga asiatica HOM05D005684 ORTHO05D007427 3.2e-115 418.7 270 78.5
BolC1t02253H Brassica oleracea HOM05D005684 ORTHO05D007427 2.7e-114 415.6 228 90.4
MBI15_g26086_MAGBIO Magnolia biondii HOM05D005684 ORTHO05D007427 1.4e-113 413.3 253 80.6
CAN.G1781.5 Capsicum annuum HOM05D005684 ORTHO05D007427 3.9e-113 411.8 238 85.3
Cfa020373 Carpinus fangiana HOM05D005684 ORTHO05D007427 7.4e-112 407.5 240 82.9
RhsimUnG0251500 Rhododendron simsii HOM05D001404 ORTHO05D002309 2.2e-111 406.0 238 84.9
Nitab4.5_0001393g0150 Nicotiana tabacum HOM05D005684 ORTHO05D007427 4.5e-109 398.3 255 78.4
Haze_09656 Corylus avellana HOM05D005684 ORTHO05D007427 1.0e-108 397.1 256 78.5
SEGI_16862 Sequoiadendron giganteum HOM05D005684 ORTHO05D007427 1.7e-108 396.4 253 75.9
Os09g0529700 Oryza sativa ssp. japonica HOM05D005684 ORTHO05D007427 6.5e-108 394.4 254 76.8
BolC1t02251H Brassica oleracea HOM05D005684 ORTHO05D007427 1.2e-106 390.2 243 82.7
SMO232G0102 Selaginella moellendorffii HOM05D005684 ORTHO05D007427 1.2e-106 390.2 245 77.1
Os11g0670700 Oryza sativa ssp. japonica HOM05D005684 ORTHO05D007427 4.7e-106 388.3 254 75.6
Oeu062595.4 Olea europaea HOM05D005684 ORTHO05D007427 6.1e-106 387.9 358 58.7
Hma1.2p1_0673F.1_g201210 Hydrangea macrophylla HOM05D005684 ORTHO05D007427 2.8e-103 379.0 260 75.0
CDE08G1370 Ceratophyllum demersum HOM05D005684 ORTHO05D007427 1.3e-100 370.2 253 73.1
Mapoly0007s0150 Marchantia polymorpha HOM05D005684 ORTHO05D007427 4.2e-99 365.2 247 71.3
Pp3c10_13560 Physcomitrium patens HOM05D005684 ORTHO05D007427 8.8e-97 357.5 244 73.0
HPP92_001822 Vanilla planifolia HOM05D005684 ORTHO05D007427 2.0e-96 356.3 218 82.1
AUR62020473 Chenopodium quinoa HOM05D005684 ORTHO05D007427 3.4e-96 355.5 255 71.4
Prupe.4G210400 Prunus persica HOM05D005684 ORTHO05D007427 7.5e-96 354.4 256 70.7
EL10Ac4g07848 Beta vulgaris HOM05D005684 ORTHO05D007427 5.9e-93 344.7 255 71.8
CBR_g28043 Chara braunii HOM05D005684 ORTHO05D007427 7.0e-86 321.2 251 62.2
FAN16G3416 Fragaria x ananassa HOM05D005684 ORTHO05D007427 3.3e-83 312.4 199 78.9
Psat5g180640 Pisum sativum HOM05D005684 ORTHO05D007427 7.3e-83 311.2 186 79.6
SEGI_13452 Sequoiadendron giganteum HOM05D005684 ORTHO05D007427 2.1e-82 309.7 211 73.5
C01p23200 Brassica napus HOM05D005684 ORTHO05D007427 1.8e-81 306.6 187 82.4
AUR62015738 Chenopodium quinoa HOM05D005684 ORTHO05D007427 1.8e-81 306.6 329 53.8
Zm00001eb103240 Zea mays HOM05D005684 ORTHO05D007427 2.0e-77 293.1 192 77.6
Ah.06g186400 Amaranthus hybridus HOM05D005684 ORTHO05D007427 5.2e-73 278.5 212 67.9
Cre17.g706650 Chlamydomonas reinhardtii HOM05D005684 ORTHO05D007427 2.9e-71 272.7 245 53.1
MELO3C032233.2 Cucumis melo HOM05D005684 ORTHO05D007427 1.2e-69 267.3 151 86.8
Duzib213G0140 Durio zibethinus HOM05D005684 ORTHO05D007427 1.3e-63 247.3 216 63.9
MCO16G427 Micromonas commoda HOM05D005684 ORTHO05D007427 2.4e-62 243.0 254 50.0
AagrBONN_evm.TU.Sc2ySwM_228.646 Anthoceros agrestis HOM05D005684 ORTHO05D007427 2.7e-61 239.6 151 77.5
CAN.G915.10 Capsicum annuum HOM05D005684 ORTHO05D007427 1.0e-60 237.7 203 63.1
Thecc.07G042900 Theobroma cacao HOM05D005684 ORTHO05D007427 1.2e-56 224.2 256 52.0
TAR626G1586 Trochodendron aralioides HOM05D005684 ORTHO05D007427 2.8e-50 203.0 127 80.3
TAR626G0395 Trochodendron aralioides HOM05D005684 ORTHO05D007427 4.4e-48 195.7 99 94.9
GSVIVG01037619001 Vitis vinifera HOM05D005684 ORTHO05D007427 2.4e-46 189.9 118 80.5
C01p23160 Brassica napus HOM05D005684 ORTHO05D007427 8.7e-44 181.4 100 87.0
PRCOL_00005955 Prasinoderma coloniale HOM05D005684 ORTHO05D007427 2.5e-43 179.9 254 43.3
MELO3C031910.2 Cucumis melo HOM05D005684 ORTHO05D007427 4.0e-41 172.6 101 78.2
PGR142G1953 Punica granatum HOM05D005684 ORTHO05D007427 5.3e-41 172.2 101 78.2
Prupe.5G052500 Prunus persica HOM05D005684 ORTHO05D007427 2.7e-37 159.8 100 76.0
Cfa026637 Carpinus fangiana HOM05D005684 ORTHO05D007427 2.3e-36 156.8 258 34.5
Dinv40739 Davidia involucrata HOM05D005684 ORTHO05D007427 1.3e-34 151.0 163 55.2
CAN.G1192.5 Capsicum annuum HOM05D005684 ORTHO05D000076 2.0e-24 117.1 103 65.0
HanXRQChr09g0268041 Helianthus annuus HOM05D005684 ORTHO05D007427 1.1e-19 101.3 102 52.0
SEGI_35638 Sequoiadendron giganteum HOM05D005684 ORTHO05D007427 3.7e-18 96.3 65 66.2
AagrBONN_evm.TU.Sc2ySwM_340.2023 Anthoceros agrestis HOM05D005684 ORTHO05D007427 3.2e-14 83.2 55 76.4
Hma1.2p1_0212F.1_g090110 Hydrangea macrophylla HOM05D005684 ORTHO05D048316 2.1e-13 80.5 44 77.3
Actinidia05107 Actinidia chinensis HOM05D006458 ORTHO05D008433 4.6e-13 79.3 142 41.5
GSVIVG01037618001 Vitis vinifera HOM05D005684 ORTHO05D048316 6.9e-09 65.5 30 93.3
SEGI_36060 Sequoiadendron giganteum HOM05D005684 ORTHO05D383802 1.2e-08 64.7 54 59.3
Zm00001eb057030 Zea mays HOM05D000424 ORTHO05D000355 7.7e-08 62.0 55 63.6


User provided reference genes

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