Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG2G9600 Aethionema arabicum HOM05D006894 ORTHO05D008724 3.3e-253 877.9 437 100.0
Thhalv10023478m.g Eutrema salsugineum HOM05D006894 ORTHO05D008724 1.4e-211 739.6 437 85.4
Sp2g03530 Schrenkiella parvula HOM05D006894 ORTHO05D008724 5.2e-206 721.1 435 83.7
AT1G60990 Arabidopsis thaliana HOM05D006894 ORTHO05D008724 3.7e-204 714.9 436 83.3
AL2G15470 Arabidopsis lyrata HOM05D006894 ORTHO05D008724 4.9e-204 714.5 436 83.7
Carub.0002s0422 Capsella rubella HOM05D006894 ORTHO05D008724 5.9e-202 707.6 438 82.4
CARHR052050 Cardamine hirsuta HOM05D006894 ORTHO05D008724 8.6e-201 703.7 439 82.0
BcaC09g49347 Brassica carinata HOM05D006894 ORTHO05D008724 4.7e-199 698.0 432 81.7
C01p37610 Brassica napus HOM05D006894 ORTHO05D008724 6.8e-198 694.1 433 81.1
A01p29780 Brassica napus HOM05D006894 ORTHO05D008724 1.5e-197 693.0 432 81.2
BcaB04g20304 Brassica carinata HOM05D006894 ORTHO05D008724 1.4e-179 633.3 433 76.7
THA.LOC104809620 Tarenaya hassleriana HOM05D006894 ORTHO05D008724 7.3e-168 594.3 439 69.7
Thecc.02G114400 Theobroma cacao HOM05D006894 ORTHO05D008724 6.2e-159 564.7 432 65.5
CiPaw.05G048800 Carya illinoinensis HOM05D006894 ORTHO05D008724 1.8e-158 563.1 413 67.1
Ciclev10001270m.g Citrus clementina HOM05D006894 ORTHO05D008724 2.4e-158 562.8 408 68.4
QL02p099211 Quercus lobata HOM05D006894 ORTHO05D008724 1.5e-157 560.1 378 70.6
Cfa005507 Carpinus fangiana HOM05D006894 ORTHO05D008724 2.6e-157 559.3 373 71.0
Gohir.A03G193500 Gossypium hirsutum HOM05D006894 ORTHO05D008724 2.6e-157 559.3 377 71.4
MD08G1235500 Malus domestica HOM05D006894 ORTHO05D008724 2.6e-157 559.3 399 68.9
Duzib248G0689 Durio zibethinus HOM05D006894 ORTHO05D008724 3.4e-157 558.9 402 68.2
Gohir.D02G214600 Gossypium hirsutum HOM05D006894 ORTHO05D008724 3.4e-157 558.9 427 65.6
Gorai.005G242400 Gossypium raimondii HOM05D006894 ORTHO05D008724 3.4e-157 558.9 427 65.6
Atru.chr6.599 Acer truncatum HOM05D006894 ORTHO05D008724 7.6e-157 557.8 439 64.9
COL.COLO4_11781 Corchorus olitorius HOM05D006894 ORTHO05D008724 7.6e-157 557.8 433 64.4
Atru.chr6.614 Acer truncatum HOM05D006894 ORTHO05D008724 1.4e-155 553.5 439 64.5
GSVIVG01022874001 Vitis vinifera HOM05D006894 ORTHO05D008724 9.3e-155 550.8 395 69.6
Prupe.1G571400 Prunus persica HOM05D006894 ORTHO05D008724 3.0e-153 545.8 398 67.8
PSO528G0189 Papaver somniferum HOM05D006894 ORTHO05D008724 5.1e-153 545.0 400 67.0
TAR628G1558 Trochodendron aralioides HOM05D006894 ORTHO05D008724 2.5e-152 542.7 376 71.0
Glyma.05G168900 Glycine max HOM05D006894 ORTHO05D008724 4.3e-152 542.0 388 68.3
Phvul.002G249600 Phaseolus vulgaris HOM05D006894 ORTHO05D008724 5.6e-152 541.6 395 66.6
VMungo0251G0921 Vigna mungo HOM05D006894 ORTHO05D008724 7.4e-152 541.2 388 68.3
TWI14G1412 Tripterygium wilfordii HOM05D006894 ORTHO05D008724 9.6e-152 540.8 373 69.4
TPR.G23092 Trifolium pratense HOM05D006894 ORTHO05D008724 1.6e-151 540.0 421 64.4
arahy.Tifrunner.gnm1.ann1.7VS6FJ Arachis hypogaea HOM05D006894 ORTHO05D008724 4.8e-151 538.5 393 68.2
Lalb_Chr12g0204471 Lupinus albus HOM05D006894 ORTHO05D008724 6.2e-151 538.1 394 67.0
PSO170G1552 Papaver somniferum HOM05D006894 ORTHO05D008724 6.2e-151 538.1 385 68.8
arahy.Tifrunner.gnm1.ann1.NZQI89 Arachis hypogaea HOM05D006894 ORTHO05D008724 1.4e-150 537.0 391 68.3
Psat7g062040 Pisum sativum HOM05D006894 ORTHO05D008724 4.0e-150 535.4 394 68.3
Manes.07G017700 Manihot esculenta HOM05D006894 ORTHO05D008724 5.3e-150 535.0 437 63.6
Nn1g08851 Nelumbo nucifera HOM05D006894 ORTHO05D008724 5.3e-150 535.0 379 68.6
Medtr8g088790 Medicago truncatula HOM05D006894 ORTHO05D008724 9.0e-150 534.3 417 65.2
FAN08G3638 Fragaria x ananassa HOM05D006894 ORTHO05D008724 2.0e-149 533.1 381 69.0
RcHm_v2.0_Chr7g0221781 Rosa chinensis HOM05D006894 ORTHO05D008724 5.8e-149 531.6 400 66.2
CANSAT11G1074 Cannabis sativa HOM05D006894 ORTHO05D008724 4.9e-148 528.5 421 63.2
Ca_17824_v3 Cicer arietinum L. HOM05D006894 ORTHO05D008724 1.4e-147 526.9 378 68.5
CAN.G798.8 Capsicum annuum HOM05D006894 ORTHO05D008724 4.2e-147 525.4 420 62.1
Aqoxy6G00238 Aquilegia oxysepala HOM05D006894 ORTHO05D008724 9.3e-147 524.2 381 66.4
CsaV3_6G037480 Cucumis sativus L. HOM05D006894 ORTHO05D008724 7.9e-146 521.2 378 67.5
Lsat_1_v5_gn_9_118621 Lactuca sativa HOM05D006894 ORTHO05D008724 1.8e-145 520.0 379 66.5
Solyc01g104060.3 Solanum lycopersicum HOM05D006894 ORTHO05D008724 3.0e-145 519.2 376 66.0
Sopen01g046470 Solanum pennellii HOM05D006894 ORTHO05D008724 5.1e-145 518.5 376 66.0
Migut.B00823 Erythranthe guttata HOM05D006894 ORTHO05D008724 2.5e-144 516.2 379 67.5
Nitab4.5_0000816g0080 Nicotiana tabacum HOM05D006894 ORTHO05D008724 2.5e-144 516.2 423 61.5
HanXRQChr09g0249011 Helianthus annuus HOM05D006894 ORTHO05D008724 4.3e-144 515.4 377 66.8
Eucgr.G00568 Eucalyptus grandis HOM05D006894 ORTHO05D008724 2.8e-143 512.7 382 66.5
Lj9A304G82 Lonicera japonica HOM05D006894 ORTHO05D008724 8.2e-143 511.1 399 64.9
Nitab4.5_0010336g0030 Nicotiana tabacum HOM05D006894 ORTHO05D008724 1.4e-142 510.4 418 62.2
ECA240G3758 Erigeron canadensis HOM05D006894 ORTHO05D008724 2.6e-141 506.1 384 64.3
Lj4g0002387 Lotus japonicus HOM05D006894 ORTHO05D008724 5.8e-141 505.0 354 70.3
Oeu027798.1 Olea europaea HOM05D006894 ORTHO05D008724 1.2e-138 497.3 369 65.9
Peaxi162Scf00017g02640 Petunia axillaris HOM05D006894 ORTHO05D008724 3.5e-138 495.7 357 67.2
MSTRG.20303 Avicennia marina HOM05D006894 ORTHO05D008724 2.3e-137 493.0 387 64.9
CDE08G1218 Ceratophyllum demersum HOM05D006894 ORTHO05D008724 5.1e-137 491.9 370 63.5
Sed0001229 Sechium edule HOM05D006894 ORTHO05D008724 6.7e-137 491.5 356 68.3
vmacro01754 Vaccinium macrocarpon HOM05D006894 ORTHO05D008724 8.7e-137 491.1 421 59.1
PGR042G0448 Punica granatum HOM05D006894 ORTHO05D008724 3.7e-135 485.7 386 63.5
DCAR_006702 Daucus carota HOM05D006894 ORTHO05D008724 4.8e-135 485.3 395 61.3
FAN18G4164 Fragaria x ananassa HOM05D006894 ORTHO05D008724 8.2e-135 484.6 418 60.5
PGSC0003DMG400023767 Solanum tuberosum HOM05D006894 ORTHO05D008724 4.1e-134 482.3 396 60.1
Peaxi162Scf00011g00531 Petunia axillaris HOM05D006894 ORTHO05D008724 1.5e-133 480.3 389 62.0
BolC1t03726H Brassica oleracea HOM05D006894 ORTHO05D008724 3.4e-133 479.2 303 81.5
BraA01t03106Z Brassica rapa HOM05D006894 ORTHO05D008724 2.9e-132 476.1 302 81.5
FvH4_5g29120 Fragaria vesca HOM05D006894 ORTHO05D008724 8.5e-132 474.6 381 63.5
FAN04G0479 Fragaria x ananassa HOM05D006894 ORTHO05D008724 4.6e-130 468.8 383 62.9
Cc02_g22630 Coffea canephora HOM05D006894 ORTHO05D008724 2.3e-129 466.5 370 63.2
MBI06_g01072_MAGBIO Magnolia biondii HOM05D006894 ORTHO05D008724 3.9e-129 465.7 487 52.0
ATR0665G083 Amborella trichopoda HOM05D006894 ORTHO05D008724 5.1e-129 465.3 393 58.3
Sc15g0002580 Simmondsia chinensis HOM05D006894 ORTHO05D008724 2.0e-128 463.4 369 61.0
Actinidia39033 Actinidia chinensis HOM05D006894 ORTHO05D008724 1.8e-126 456.8 361 63.2
Rhsim11G0128300 Rhododendron simsii HOM05D006894 ORTHO05D008724 1.8e-126 456.8 403 58.1
SEGI_07604 Sequoiadendron giganteum HOM05D006894 ORTHO05D008724 1.6e-122 443.7 365 58.6
Actinidia30531 Actinidia chinensis HOM05D006894 ORTHO05D008724 3.0e-121 439.5 365 60.8
Dinv19376 Davidia involucrata HOM05D006894 ORTHO05D008724 2.9e-116 422.9 291 71.5
AagrBONN_evm.TU.Sc2ySwM_344.1590 Anthoceros agrestis HOM05D006894 ORTHO05D007218 3.6e-114 416.0 371 54.7
Mapoly0039s0108 Marchantia polymorpha HOM05D006894 ORTHO05D008724 6.7e-113 411.8 368 53.0
Haze_01731 Corylus avellana HOM05D006894 ORTHO05D008724 1.3e-103 380.9 442 48.6
Pp3c9_20800 Physcomitrium patens HOM05D006894 ORTHO05D008724 4.1e-102 375.9 398 48.7
MELO3C014368.2 Cucumis melo HOM05D006894 ORTHO05D008724 5.3e-102 375.6 379 52.8
SMO119G0367 Selaginella moellendorffii HOM05D006894 ORTHO05D008724 1.2e-101 374.4 355 51.5
FAN13G2283 Fragaria x ananassa HOM05D006894 ORTHO05D008724 3.5e-93 346.3 379 51.2
CSS0024184 Camellia sinensis var. sinensis HOM05D006894 ORTHO05D008724 1.0e-92 344.7 379 50.1
CBR_g30837 Chara braunii HOM05D000019 ORTHO05D000048 3.3e-91 339.7 344 49.4
unitig_749.g14128 Utricularia gibba HOM05D006894 ORTHO05D008724 2.4e-86 323.6 309 55.3
SEGI_10844 Sequoiadendron giganteum HOM05D006894 ORTHO05D008724 9.5e-75 285.0 324 47.5
Cre12.g552850 Chlamydomonas reinhardtii HOM05D006894 ORTHO05D008724 1.7e-60 237.7 391 37.1
Rhsim09G0048600 Rhododendron simsii HOM05D006894 ORTHO05D008724 2.1e-58 230.7 369 39.6
BcaB01g03502 Brassica carinata HOM05D006894 ORTHO05D008724 6.2e-50 202.6 158 69.0
Cpa.g.sc30.18 Carica papaya HOM05D006894 ORTHO05D008724 1.5e-48 198.0 138 71.0
ClCG09G014030 Citrullus lanatus HOM05D006894 ORTHO05D008724 5.4e-46 189.5 130 68.5
BcaB05g23073 Brassica carinata HOM05D006894 ORTHO05D008724 7.1e-46 189.1 108 82.4
BcaB02g10691 Brassica carinata HOM05D000189 ORTHO05D000474 4.5e-40 169.9 182 55.5
Rhsim09G0016000 Rhododendron simsii HOM05D006894 ORTHO05D008724 8.7e-36 155.6 193 46.1
Cpa.g.sc30.19 Carica papaya HOM05D006894 ORTHO05D008724 8.2e-26 122.5 122 51.6
Pp3c5_7230 Physcomitrium patens HOM05D006894 ORTHO05D008724 7.2e-22 109.4 167 39.5
Duzib052G1224 Durio zibethinus HOM05D006894 ORTHO05D008724 7.9e-21 105.9 122 49.2
ClCG09G014040 Citrullus lanatus HOM05D006894 ORTHO05D008724 3.0e-20 104.0 89 57.3
PRCOL_00004673 Prasinoderma coloniale HOM05D006894 ORTHO05D008724 3.9e-20 103.6 349 25.8
Solyc09g015460.3 Solanum lycopersicum HOM05D006894 ORTHO05D008724 1.5e-19 101.7 58 79.3
Glyma.08G127500 Glycine max HOM05D006894 ORTHO05D008724 1.2e-16 92.0 96 50.0
unitig_749.g14127 Utricularia gibba HOM05D006894 ORTHO05D008724 1.2e-16 92.0 76 57.9
ClCG09G014050 Citrullus lanatus HOM05D006894 ORTHO05D008724 2.9e-15 87.4 68 58.8
Peaxi162Scf01350g00016 Petunia axillaris HOM05D006894 ORTHO05D008724 3.0e-12 77.4 52 71.2
CDE06G1775 Ceratophyllum demersum HOM05D006894 ORTHO05D008724 8.8e-12 75.9 234 28.6
Cpa.g.sc3656.1 Carica papaya HOM05D006894 ORTHO05D008724 2.8e-10 70.9 80 50.0
CAN.G798.10 Capsicum annuum HOM05D006894 ORTHO05D008724 3.7e-10 70.5 179 29.6


User provided reference genes

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