Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG2G9270 Aethionema arabicum HOM05D008190 ORTHO05D010344 6.9e-37 156.8 77 100.0
Carub.0002s0365 Capsella rubella HOM05D008190 ORTHO05D010344 1.2e-17 92.8 75 57.3
Carub.0002s0363 Capsella rubella HOM05D008190 ORTHO05D010344 1.6e-17 92.4 74 60.8
AT1G61566 Arabidopsis thaliana HOM05D008190 ORTHO05D010344 6.7e-16 87.0 72 59.7
CARHR050840 Cardamine hirsuta HOM05D008190 ORTHO05D010344 1.9e-15 85.5 72 56.9
Aa31LG2G9280 Aethionema arabicum HOM05D008190 ORTHO05D010344 2.5e-15 85.1 47 76.6
C02p06600 Brassica napus HOM05D008190 ORTHO05D010344 7.4e-15 83.6 72 54.2
AL2G14700 Arabidopsis lyrata HOM05D008190 ORTHO05D010344 4.8e-14 80.9 72 55.6
BcaC04g22340 Brassica carinata HOM05D008190 ORTHO05D010344 6.3e-14 80.5 75 54.7
C09p20430 Brassica napus HOM05D008190 ORTHO05D010344 6.3e-14 80.5 75 54.7
BolC9t54947H Brassica oleracea HOM05D008190 ORTHO05D010344 6.3e-14 80.5 75 54.7
BcaB04g20338 Brassica carinata HOM05D008190 ORTHO05D010344 8.2e-14 80.1 72 55.6
C01p38420 Brassica napus HOM05D008190 ORTHO05D010344 1.4e-13 79.3 72 52.8
BolC1t03807H Brassica oleracea HOM05D008190 ORTHO05D010344 1.4e-13 79.3 72 52.8
BolC1t03808H Brassica oleracea HOM05D008190 ORTHO05D010344 1.4e-13 79.3 72 52.8
BcaB04g20339 Brassica carinata HOM05D008190 ORTHO05D010344 1.8e-13 79.0 72 55.6
BcaB04g20340 Brassica carinata HOM05D008190 ORTHO05D010344 1.8e-13 79.0 72 55.6
BcaB04g20342 Brassica carinata HOM05D008190 ORTHO05D010344 1.8e-13 79.0 72 55.6
AL2G14690 Arabidopsis lyrata HOM05D008190 ORTHO05D010344 3.1e-13 78.2 72 55.6
AL2G14720 Arabidopsis lyrata HOM05D008190 ORTHO05D010344 3.1e-13 78.2 75 53.3
AT2G22055 Arabidopsis thaliana HOM05D008190 ORTHO05D010344 3.1e-13 78.2 75 49.3
Sp2g03040 Schrenkiella parvula HOM05D008190 ORTHO05D010344 4.1e-13 77.8 72 54.2
AT1G61563 Arabidopsis thaliana HOM05D008190 ORTHO05D010344 9.1e-13 76.6 76 52.6
AL8G22740 Arabidopsis lyrata HOM05D008190 ORTHO05D010344 1.5e-12 75.9 73 50.7
A01p30280 Brassica napus HOM05D008190 ORTHO05D010344 1.5e-12 75.9 72 51.4
BraA01t03163Z Brassica rapa HOM05D008190 ORTHO05D010344 1.5e-12 75.9 72 51.4
BcaC04g22331 Brassica carinata HOM05D008190 ORTHO05D010344 2.0e-12 75.5 72 56.9
BcaC04g22332 Brassica carinata HOM05D008190 ORTHO05D010344 2.0e-12 75.5 72 56.9
C09p20480 Brassica napus HOM05D008190 ORTHO05D010344 2.0e-12 75.5 72 56.9
C09p20500 Brassica napus HOM05D008190 ORTHO05D010344 2.0e-12 75.5 72 56.9
BolC9t54953H Brassica oleracea HOM05D008190 ORTHO05D010344 2.0e-12 75.5 72 56.9
BolC9t54955H Brassica oleracea HOM05D008190 ORTHO05D010344 2.0e-12 75.5 72 56.9
Thhalv10024096m.g Eutrema salsugineum HOM05D008190 ORTHO05D010344 7.7e-12 73.6 72 54.2
A01p30270 Brassica napus HOM05D008190 ORTHO05D010344 1.0e-11 73.2 72 50.0
A09p16740 Brassica napus HOM05D008190 ORTHO05D010344 1.0e-11 73.2 72 55.6
A09p16750 Brassica napus HOM05D008190 ORTHO05D010344 1.0e-11 73.2 72 55.6
BraA01t03162Z Brassica rapa HOM05D008190 ORTHO05D010344 1.0e-11 73.2 72 50.0
BraA09t37311Z Brassica rapa HOM05D008190 ORTHO05D010344 1.0e-11 73.2 72 55.6
BraA09t37312Z Brassica rapa HOM05D008190 ORTHO05D010344 1.0e-11 73.2 72 55.6
BcaC09g50377 Brassica carinata HOM05D008190 ORTHO05D010344 1.3e-11 72.8 72 52.8
BcaC04g22333 Brassica carinata HOM05D008190 ORTHO05D010344 1.7e-11 72.4 72 55.6
BcaC04g22334 Brassica carinata HOM05D008190 ORTHO05D010344 1.7e-11 72.4 72 55.6
BcaC04g22335 Brassica carinata HOM05D008190 ORTHO05D010344 1.7e-11 72.4 72 55.6
BcaC04g22336 Brassica carinata HOM05D008190 ORTHO05D010344 1.7e-11 72.4 72 55.6
BcaC04g22337 Brassica carinata HOM05D008190 ORTHO05D010344 1.7e-11 72.4 72 55.6
BcaC04g22338 Brassica carinata HOM05D008190 ORTHO05D010344 1.7e-11 72.4 72 55.6
C09p20440 Brassica napus HOM05D008190 ORTHO05D010344 1.7e-11 72.4 72 55.6
C09p20450 Brassica napus HOM05D008190 ORTHO05D010344 1.7e-11 72.4 72 55.6
C09p20460 Brassica napus HOM05D008190 ORTHO05D010344 1.7e-11 72.4 72 55.6
C09p20470 Brassica napus HOM05D008190 ORTHO05D010344 1.7e-11 72.4 72 55.6
BolC9t54948H Brassica oleracea HOM05D008190 ORTHO05D010344 1.7e-11 72.4 72 55.6
BolC9t54950H Brassica oleracea HOM05D008190 ORTHO05D010344 1.7e-11 72.4 72 55.6
BolC9t54951H Brassica oleracea HOM05D008190 ORTHO05D010344 1.7e-11 72.4 72 55.6
BolC9t54952H Brassica oleracea HOM05D008190 ORTHO05D010344 1.7e-11 72.4 72 55.6
CARHR050830 Cardamine hirsuta HOM05D008190 ORTHO05D010344 3.8e-11 71.2 75 48.0
BcaC03g13507 Brassica carinata HOM05D008190 ORTHO05D010344 5.0e-11 70.9 72 51.4
BolC2t06606H Brassica oleracea HOM05D008190 ORTHO05D010344 5.0e-11 70.9 72 51.4
Thhalv10024053m.g Eutrema salsugineum HOM05D008190 ORTHO05D010344 1.1e-10 69.7 72 51.4
BcaB04g20341 Brassica carinata HOM05D008190 ORTHO05D010344 1.9e-10 68.9 58 55.2
C01p38410 Brassica napus HOM05D008190 ORTHO05D010344 1.9e-10 68.9 72 48.6
A02p02380 Brassica napus HOM05D008190 ORTHO05D010344 3.2e-10 68.2 72 48.6
BraA02t05208Z Brassica rapa HOM05D008190 ORTHO05D010344 3.2e-10 68.2 72 48.6
Aa31LG6G5470 Aethionema arabicum HOM05D008190 ORTHO05D010344 2.7e-09 65.1 47 59.6
Aa31LG5G4450 Aethionema arabicum HOM05D008190 ORTHO05D010344 7.9e-09 63.5 74 40.5
BolC9t54949H Brassica oleracea HOM05D008190 ORTHO05D010344 5.1e-08 60.8 65 55.4


User provided reference genes

Program Settings