Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG2G8670 Aethionema arabicum HOM05D005909 ORTHO05D007481 1.8e-284 981.9 488 100.0
AL5G10170 Arabidopsis lyrata HOM05D005909 ORTHO05D007481 3.8e-189 665.2 384 86.2
CARHR143760 Cardamine hirsuta HOM05D005909 ORTHO05D007481 1.4e-188 663.3 384 85.4
BcaC06g34207 Brassica carinata HOM05D005909 ORTHO05D007481 5.1e-186 654.8 385 84.9
AT2G01220 Arabidopsis thaliana HOM05D005909 ORTHO05D007481 9.6e-185 650.6 384 84.1
C07p31670 Brassica napus HOM05D005909 ORTHO05D007481 1.3e-184 650.2 386 84.7
BolC7t43706H Brassica oleracea HOM05D005909 ORTHO05D007481 1.3e-184 650.2 386 84.7
A06p44550 Brassica napus HOM05D005909 ORTHO05D007481 6.2e-184 647.9 385 84.4
Sp2g12680 Schrenkiella parvula HOM05D005909 ORTHO05D007481 8.1e-184 647.5 383 83.8
BraA06t27329Z Brassica rapa HOM05D005909 ORTHO05D007481 3.4e-182 642.1 390 83.6
THA.LOC104823950 Tarenaya hassleriana HOM05D005909 ORTHO05D007481 2.5e-180 636.0 385 81.0
Thhalv10000909m.g Eutrema salsugineum HOM05D005909 ORTHO05D007481 5.7e-177 624.8 384 83.3
AL5G17030 Arabidopsis lyrata HOM05D005909 ORTHO05D007481 1.3e-170 603.6 386 79.0
Carub.0005s0605 Capsella rubella HOM05D005909 ORTHO05D007481 1.3e-168 597.0 386 79.3
AT3G27610 Arabidopsis thaliana HOM05D005909 ORTHO05D007481 1.5e-166 590.1 385 78.4
CARHR148990 Cardamine hirsuta HOM05D005909 ORTHO05D007481 1.2e-163 580.5 384 76.0
Nn4g23953 Nelumbo nucifera HOM05D005909 ORTHO05D007481 9.7e-161 570.9 387 71.8
Prupe.1G316800 Prunus persica HOM05D005909 ORTHO05D007481 2.2e-160 569.7 377 73.5
Lj5g0016761 Lotus japonicus HOM05D005909 ORTHO05D007481 5.3e-159 565.1 383 70.0
CiPaw.05G242600 Carya illinoinensis HOM05D005909 ORTHO05D007481 6.9e-159 564.7 381 70.9
TAR622G1259 Trochodendron aralioides HOM05D005909 ORTHO05D007481 1.0e-157 560.8 383 71.0
Sabra10G0090400 Salix brachista HOM05D005909 ORTHO05D007481 2.2e-157 559.7 387 69.8
TWI79G1572 Tripterygium wilfordii HOM05D005909 ORTHO05D007481 1.1e-156 557.4 383 69.5
GSVIVG01011843001 Vitis vinifera HOM05D005909 ORTHO05D007481 1.1e-156 557.4 381 72.7
Nitab4.5_0002112g0090 Nicotiana tabacum HOM05D005909 ORTHO05D007481 1.9e-156 556.6 383 71.8
RcHm_v2.0_Chr4g0434411 Rosa chinensis HOM05D005909 ORTHO05D007481 1.9e-156 556.6 382 70.9
QL01p010815 Quercus lobata HOM05D005909 ORTHO05D007481 2.5e-156 556.2 384 69.8
QL93p0145_0024 Quercus lobata HOM05D005909 ORTHO05D007481 2.5e-156 556.2 384 69.8
Hma1.2p1_1314F.1_g274990 Hydrangea macrophylla HOM05D005909 ORTHO05D007481 3.2e-156 555.8 384 70.3
Potri.010G120200 Populus trichocarpa HOM05D005909 ORTHO05D007481 3.2e-156 555.8 386 68.9
Hma1.2p1_2306F.1_g319360 Hydrangea macrophylla HOM05D005909 ORTHO05D007481 4.2e-156 555.4 384 70.3
Atru.chr11.237 Acer truncatum HOM05D005909 ORTHO05D007481 5.5e-156 555.1 384 70.6
COL.COLO4_32148 Corchorus olitorius HOM05D005909 ORTHO05D007481 5.5e-156 555.1 383 69.5
FvH4_4g26720 Fragaria vesca HOM05D005909 ORTHO05D007481 5.5e-156 555.1 377 71.9
Lsat_1_v5_gn_3_62021 Lactuca sativa HOM05D005909 ORTHO05D007481 7.2e-156 554.7 383 70.8
MD16G1037200 Malus domestica HOM05D005909 ORTHO05D007481 1.6e-155 553.5 388 70.6
Nitab4.5_0000694g0120 Nicotiana tabacum HOM05D005909 ORTHO05D007481 3.6e-155 552.4 384 71.4
HanXRQChr15g0477421 Helianthus annuus HOM05D005909 ORTHO05D007481 4.7e-155 552.0 386 70.5
Solyc05g008870.3 Solanum lycopersicum HOM05D005909 ORTHO05D007481 1.0e-154 550.8 383 71.5
Sopen05g004630 Solanum pennellii HOM05D005909 ORTHO05D007481 1.0e-154 550.8 383 71.5
arahy.Tifrunner.gnm1.ann1.IU6D7D Arachis hypogaea HOM05D005909 ORTHO05D007481 1.4e-154 550.4 392 68.9
Gohir.D02G171900 Gossypium hirsutum HOM05D005909 ORTHO05D007481 1.8e-154 550.1 385 70.4
Gorai.005G193400 Gossypium raimondii HOM05D005909 ORTHO05D007481 1.8e-154 550.1 391 69.8
Actinidia14921 Actinidia chinensis HOM05D005909 ORTHO05D007481 2.3e-154 549.7 384 70.8
CAN.G610.24 Capsicum annuum HOM05D005909 ORTHO05D007481 2.3e-154 549.7 383 70.8
Ciclev10015519m.g Citrus clementina HOM05D005909 ORTHO05D007481 2.3e-154 549.7 384 69.0
Duzib248G1493 Durio zibethinus HOM05D005909 ORTHO05D007481 2.3e-154 549.7 393 69.2
Glyma.20G120600 Glycine max HOM05D005909 ORTHO05D007481 2.3e-154 549.7 383 67.9
TPR.G4906 Trifolium pratense HOM05D005909 ORTHO05D007481 2.3e-154 549.7 386 68.4
arahy.Tifrunner.gnm1.ann1.W577BF Arachis hypogaea HOM05D005909 ORTHO05D007481 6.7e-154 548.1 378 69.8
CSS0033004 Camellia sinensis var. sinensis HOM05D005909 ORTHO05D007481 6.7e-154 548.1 384 70.6
Ca_06889_v3 Cicer arietinum L. HOM05D005909 ORTHO05D007481 8.8e-154 547.7 385 68.3
ECA246G0525 Erigeron canadensis HOM05D005909 ORTHO05D007481 8.8e-154 547.7 381 71.4
Psat6g224680 Pisum sativum HOM05D005909 ORTHO05D007481 4.4e-153 545.4 386 68.9
Gohir.A03G148900 Gossypium hirsutum HOM05D005909 ORTHO05D007481 5.7e-153 545.0 392 69.6
Medtr1g109590 Medicago truncatula HOM05D005909 ORTHO05D007481 9.7e-153 544.3 383 68.4
Eucgr.G02238 Eucalyptus grandis HOM05D005909 ORTHO05D007481 2.2e-152 543.1 379 69.9
Aqoxy3G04056 Aquilegia oxysepala HOM05D005909 ORTHO05D007481 4.8e-152 542.0 383 68.9
Cfa015837 Carpinus fangiana HOM05D005909 ORTHO05D007481 1.4e-151 540.4 384 69.0
DCAR_007264 Daucus carota HOM05D005909 ORTHO05D007481 4.1e-151 538.9 382 69.1
PGR119G2457 Punica granatum HOM05D005909 ORTHO05D007481 5.3e-151 538.5 386 67.6
CsaV3_5G028790 Cucumis sativus L. HOM05D005909 ORTHO05D007481 7.0e-151 538.1 384 68.2
Lalb_Chr21g0308731 Lupinus albus HOM05D005909 ORTHO05D007481 9.1e-151 537.7 388 67.0
Sed0017467 Sechium edule HOM05D005909 ORTHO05D007481 1.3e-149 533.9 384 68.0
Phvul.007G032000 Phaseolus vulgaris HOM05D005909 ORTHO05D007481 2.2e-149 533.1 383 67.4
vmacro10599 Vaccinium macrocarpon HOM05D005909 ORTHO05D007481 2.9e-149 532.7 384 68.2
Sc14g0007280 Simmondsia chinensis HOM05D005909 ORTHO05D007481 1.1e-148 530.8 385 67.5
MELO3C005340.2 Cucumis melo HOM05D005909 ORTHO05D007481 1.5e-148 530.4 384 67.2
PSO782G5715 Papaver somniferum HOM05D005909 ORTHO05D007481 1.9e-148 530.0 379 68.1
VMungo0720G1068 Vigna mungo HOM05D005909 ORTHO05D007481 1.9e-148 530.0 379 67.3
MBI16_g44832_MAGBIO Magnolia biondii HOM05D005909 ORTHO05D007481 5.5e-148 528.5 384 68.2
SalBow8G3248 Salvia bowleyana HOM05D005909 ORTHO05D007481 7.2e-148 528.1 381 66.7
Lj6A753G52 Lonicera japonica HOM05D005909 ORTHO05D007481 2.1e-147 526.6 384 68.2
Rhsim09G0103900 Rhododendron simsii HOM05D005909 ORTHO05D007481 3.0e-146 522.7 400 65.0
Cc11_g09670 Coffea canephora HOM05D005909 ORTHO05D007481 4.0e-146 522.3 383 67.1
ATR0807G244 Amborella trichopoda HOM05D005909 ORTHO05D007481 2.0e-145 520.0 383 65.3
AUR62037268 Chenopodium quinoa HOM05D005909 ORTHO05D007481 4.4e-145 518.8 383 64.0
SalBow8G0352 Salvia bowleyana HOM05D005909 ORTHO05D007481 7.5e-145 518.1 388 65.2
MSTRG.13555 Avicennia marina HOM05D005909 ORTHO05D007481 9.7e-145 517.7 381 66.4
HPP92_024514 Vanilla planifolia HOM05D005909 ORTHO05D007481 1.7e-144 516.9 378 66.9
AUR62002812 Chenopodium quinoa HOM05D005909 ORTHO05D007481 3.1e-143 512.7 383 63.7
Hund20744 Selenicereus undatus HOM05D005909 ORTHO05D007481 4.1e-143 512.3 390 64.6
CDE08G1136 Ceratophyllum demersum HOM05D005909 ORTHO05D007481 1.2e-142 510.8 384 64.1
Haze_00654 Corylus avellana HOM05D005909 ORTHO05D007481 1.6e-142 510.4 516 53.7
Cpa.g.sc65.66 Carica papaya HOM05D005909 ORTHO05D007481 5.9e-142 508.4 383 67.4
Zm00001eb360650 Zea mays HOM05D005909 ORTHO05D007481 5.5e-140 501.9 381 65.4
EL10Ac6g14305 Beta vulgaris HOM05D005909 ORTHO05D007481 3.6e-139 499.2 377 62.3
Dinv16136 Davidia involucrata HOM05D005909 ORTHO05D007481 1.2e-137 494.2 382 66.5
unitig_699.g19483 Utricularia gibba HOM05D005909 ORTHO05D007481 2.8e-136 489.6 381 63.5
Ah.03g138370 Amaranthus hybridus HOM05D005909 ORTHO05D007481 3.7e-136 489.2 354 66.4
Migut.E00369 Erythranthe guttata HOM05D005909 ORTHO05D007481 3.7e-136 489.2 426 59.2
PSO063G1187 Papaver somniferum HOM05D005909 ORTHO05D007481 7.7e-134 481.5 344 68.9
Peaxi162Scf00179g00534 Petunia axillaris HOM05D005909 ORTHO05D007481 2.2e-133 479.9 383 64.8
Manes.06G064900 Manihot esculenta HOM05D005909 ORTHO05D007481 1.8e-130 470.3 308 73.4
FAN07G1481 Fragaria x ananassa HOM05D005909 ORTHO05D007481 8.8e-130 468.0 352 66.5
ClCG01G005900 Citrullus lanatus HOM05D005909 ORTHO05D007481 2.6e-129 466.5 384 61.7
Carub.0005s0021 Capsella rubella HOM05D005909 ORTHO05D007481 7.7e-126 454.9 266 85.3
Thecc.02G222000 Theobroma cacao HOM05D005909 ORTHO05D007481 1.6e-123 447.2 309 71.5
FAN12G0127 Fragaria x ananassa HOM05D005909 ORTHO05D007481 8.3e-120 434.9 291 72.9
FAN22G0620 Fragaria x ananassa HOM05D005909 ORTHO05D007481 7.8e-118 428.3 294 71.4
FAN12G0185 Fragaria x ananassa HOM05D005909 ORTHO05D007481 4.3e-116 422.5 314 67.5
AagrBONN_evm.TU.Sc2ySwM_362.1435 Anthoceros agrestis HOM05D004406 ORTHO05D005660 1.6e-115 420.6 383 54.0
Mapoly0100s0051 Marchantia polymorpha HOM05D005909 ORTHO05D007481 3.7e-112 409.5 381 54.6
CANSAT01G0643 Cannabis sativa HOM05D005909 ORTHO05D007481 5.6e-108 395.6 264 71.2
SMO196G0003 Selaginella moellendorffii HOM05D005909 ORTHO05D007481 2.1e-107 393.7 399 50.6
Pp3c3_16750 Physcomitrium patens HOM05D005909 ORTHO05D007481 2.8e-107 393.3 381 52.0
Dinv31596 Davidia involucrata HOM05D005909 ORTHO05D007481 1.8e-106 390.6 330 61.2
Oeu027686.1 Olea europaea HOM05D005909 ORTHO05D007481 1.8e-106 390.6 384 54.4
Actinidia16683 Actinidia chinensis HOM05D005909 ORTHO05D007481 8.9e-106 388.3 311 64.0
Pp3c12_7340 Physcomitrium patens HOM05D005909 ORTHO05D007481 1.5e-105 387.5 378 51.6
FAN17G2694 Fragaria x ananassa HOM05D005909 ORTHO05D007481 2.5e-100 370.2 377 55.7
TAR622G0977 Trochodendron aralioides HOM05D005909 ORTHO05D007481 3.8e-96 356.3 231 74.9
Os01g0691500 Oryza sativa ssp. japonica HOM05D005909 ORTHO05D007481 1.1e-87 328.2 268 61.6
Carub.0005s0593 Capsella rubella HOM05D005909 ORTHO05D007481 3.3e-84 316.6 245 69.0
SGA_v2.0_scaffold14G06904 Striga asiatica HOM05D005909 ORTHO05D007481 4.2e-79 299.7 234 64.1
SGA_v2.0_scaffold14G06901 Striga asiatica HOM05D005909 ORTHO05D007481 2.3e-61 240.7 147 75.5
Cre06.g278116 Chlamydomonas reinhardtii HOM05D005909 ORTHO05D007481 2.8e-59 233.8 429 36.1
MCO06G004 Micromonas commoda HOM05D005909 ORTHO05D007481 1.2e-57 228.4 393 36.4
PRCOL_00006609 Prasinoderma coloniale HOM05D005909 ORTHO05D007481 3.4e-57 226.9 429 35.4
PGSC0003DMG401030529 Solanum tuberosum HOM05D005909 ORTHO05D007481 6.9e-50 202.6 153 68.0
SEGI_08541 Sequoiadendron giganteum HOM05D005909 ORTHO05D007481 7.9e-46 189.1 152 61.8
Oeu027687.1 Olea europaea HOM05D005909 ORTHO05D007481 7.7e-41 172.6 115 73.0
SEGI_29486 Sequoiadendron giganteum HOM05D005909 ORTHO05D007481 3.0e-37 160.6 109 67.9
CBR_g39317 Chara braunii HOM05D005909 ORTHO05D007481 5.5e-31 139.8 182 43.4
CiPaw.05G241800 Carya illinoinensis HOM05D005909 ORTHO05D007481 6.1e-22 109.8 64 79.7
BcaC06g31323 Brassica carinata HOM05D005909 ORTHO05D007481 1.8e-21 108.2 65 81.5
arahy.Tifrunner.gnm1.ann1.XNS652 Arachis hypogaea HOM05D005909 ORTHO05D007481 2.0e-20 104.8 146 43.8
SMO265G0018 Selaginella moellendorffii HOM05D005909 ORTHO05D007481 3.7e-19 100.5 153 36.6
SMO163G0092 Selaginella moellendorffii HOM05D005909 ORTHO05D007481 1.2e-17 95.5 149 38.3
SMO146G0235 Selaginella moellendorffii HOM05D020292 ORTHO05D030583 1.8e-13 81.6 113 41.6
SEGI_32432 Sequoiadendron giganteum HOM05D005909 ORTHO05D007481 9.8e-12 75.9 68 48.5
CBR_g39316 Chara braunii HOM05D000019 ORTHO05D000002 2.2e-11 74.7 71 50.7
TPR.G28941 Trifolium pratense HOM05D000324 ORTHO05D004875 2.2e-11 74.7 99 43.4
Gohir.D12G121400 Gossypium hirsutum HOM05D005909 ORTHO05D046826 8.3e-11 72.8 36 88.9
SMO199G0001 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 7.0e-10 69.7 88 40.9
Gorai.008G132300 Gossypium raimondii HOM05D005909 ORTHO05D046826 1.0e-08 65.9 36 80.6
SMO201G0205 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 2.8e-06 57.8 54 44.4


User provided reference genes

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